RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 CBX2Q14781 532 aaPredicted RBP11.17□□□□□ -0.62
LIG1-210ENST00000596332 ATAT1Q5SQI0 421 aa11.17□□□□□ -0.62
LIG1-210ENST00000596332 SPECC1LQ69YQ0 1117 aa11.17□□□□□ -0.62
LIG1-210ENST00000596332 PTCRAQ6ISU1 281 aaPredicted RBP11.17□□□□□ -0.62
LIG1-210ENST00000596332 DENND5BQ6ZUT9 1274 aa11.17□□□□□ -0.62
LIG1-210ENST00000596332 TMEM110Q86TL2 294 aa11.17□□□□□ -0.62
LIG1-210ENST00000596332 NUP93Q8N1F7 819 aa11.17□□□□□ -0.62
LIG1-210ENST00000596332 SLC30A5Q8TAD4 765 aa11.17□□□□□ -0.62
LIG1-210ENST00000596332 ATXN2LQ8WWM7 1075 aaKnown RBP11.17□□□□□ -0.62
LIG1-210ENST00000596332 NDRG1Q92597 394 aaKnown RBP11.17□□□□□ -0.62
LIG1-210ENST00000596332 ZNF512Q96ME7 567 aaPredicted RBP11.17□□□□□ -0.62
LIG1-210ENST00000596332 PCMTD1Q96MG8 357 aaPredicted RBP11.17□□□□□ -0.62
LIG1-210ENST00000596332 ASB2Q96Q27 587 aa11.17□□□□□ -0.62
LIG1-210ENST00000596332 NMUR1Q9HB89 426 aa11.17□□□□□ -0.62
LIG1-210ENST00000596332 CD320Q9NPF0 282 aa11.17□□□□□ -0.62
LIG1-210ENST00000596332 THEGQ9P2T0 379 aa11.17□□□□□ -0.62
LIG1-210ENST00000596332 PATJQ8NI35 1801 aa11.16□□□□□ -0.62
LIG1-210ENST00000596332 LOC730098B7Z3J9 87 aa11.16□□□□□ -0.62
LIG1-210ENST00000596332 CBFA2T2O43439 604 aa11.16□□□□□ -0.62
LIG1-210ENST00000596332 XYLBO75191 536 aa11.16□□□□□ -0.62
LIG1-210ENST00000596332 FYNP06241 537 aa11.16□□□□□ -0.62
LIG1-210ENST00000596332 SRGAP2BP0DMP2 458 aa11.16□□□□□ -0.62
LIG1-210ENST00000596332 SKILP12757 684 aa11.16□□□□□ -0.62
LIG1-210ENST00000596332 UNGP13051 313 aaPredicted RBP11.16□□□□□ -0.62
LIG1-210ENST00000596332 CEBPBP17676 345 aa11.16□□□□□ -0.62
LIG1-210ENST00000596332 MTHFRP42898 656 aa11.16□□□□□ -0.62
LIG1-210ENST00000596332 BCAT1P54687 386 aa11.16□□□□□ -0.62
LIG1-210ENST00000596332 ZBED6P86452 979 aa11.16□□□□□ -0.62
LIG1-210ENST00000596332 CDR2Q01850 454 aa11.16□□□□□ -0.62
LIG1-210ENST00000596332 TAF10Q12962 218 aa11.16□□□□□ -0.62
LIG1-210ENST00000596332 PLD1Q13393 1074 aa11.16□□□□□ -0.62
LIG1-210ENST00000596332 STILQ15468 1287 aa11.16□□□□□ -0.62
LIG1-210ENST00000596332 ASTE1Q2TB18 679 aaPredicted RBP11.16□□□□□ -0.62
LIG1-210ENST00000596332 PABPC1LQ4VXU2 614 aaKnown RBP11.16□□□□□ -0.62
LIG1-210ENST00000596332 SNX30Q5VWJ9 437 aa11.16□□□□□ -0.62
LIG1-210ENST00000596332 ZNF571Q7Z3V5 609 aaPredicted RBP11.16□□□□□ -0.62
LIG1-210ENST00000596332 NPAS3Q8IXF0 933 aa11.16□□□□□ -0.62
LIG1-210ENST00000596332 RIN3Q8TB24 985 aa11.16□□□□□ -0.62
LIG1-210ENST00000596332 STK32AQ8WU08 396 aa11.16□□□□□ -0.62
LIG1-210ENST00000596332 CPLX3Q8WVH0 158 aa11.16□□□□□ -0.62
LIG1-210ENST00000596332 SYN2Q92777 582 aaPredicted RBP11.16□□□□□ -0.62
LIG1-210ENST00000596332 LRRC3BQ96PB8 259 aa11.16□□□□□ -0.62
LIG1-210ENST00000596332 SPAG5Q96R06 1193 aa11.16□□□□□ -0.62
LIG1-210ENST00000596332 SLC22A12Q96S37 553 aa11.16□□□□□ -0.62
LIG1-210ENST00000596332 CPXM1Q96SM3 734 aa11.16□□□□□ -0.62
LIG1-210ENST00000596332 DNAJC7Q99615 494 aa11.16□□□□□ -0.62
LIG1-210ENST00000596332 NUP58Q9BVL2 599 aa11.16□□□□□ -0.62
LIG1-210ENST00000596332 SLC46A2Q9BY10 475 aa11.16□□□□□ -0.62
LIG1-210ENST00000596332 TRIM5Q9C035 493 aa11.16□□□□□ -0.62
LIG1-210ENST00000596332 CHORDC1Q9UHD1 332 aaPredicted RBP11.16□□□□□ -0.62
LIG1-210ENST00000596332 NENFQ9UMX5 172 aa11.16□□□□□ -0.62
LIG1-210ENST00000596332 VCANP13611 3396 aa11.16□□□□□ -0.62
LIG1-210ENST00000596332 A0A1W2PRU2 124 aa11.15□□□□□ -0.62
LIG1-210ENST00000596332 ZNF840PA6NDX5 716 aa11.15□□□□□ -0.62
LIG1-210ENST00000596332 C2CD4DB7Z1M9 353 aa11.15□□□□□ -0.62
LIG1-210ENST00000596332 DDX3XO00571 662 aaKnown RBP eCLIP11.15□□□□□ -0.62
LIG1-210ENST00000596332 PAPSS1O43252 624 aaPredicted RBP11.15□□□□□ -0.62
LIG1-210ENST00000596332 SLC34A2O95436 690 aa11.15□□□□□ -0.62
LIG1-210ENST00000596332 PLEKP08567 350 aaPredicted RBP11.15□□□□□ -0.62
LIG1-210ENST00000596332 SETSIPP0DME0 302 aa11.15□□□□□ -0.62
LIG1-210ENST00000596332 MYL4P12829 197 aa11.15□□□□□ -0.62
LIG1-210ENST00000596332 FSHRP23945 695 aa11.15□□□□□ -0.62
LIG1-210ENST00000596332 FCARP24071 287 aa11.15□□□□□ -0.62
LIG1-210ENST00000596332 GABRR2P28476 465 aa11.15□□□□□ -0.62
LIG1-210ENST00000596332 RGS7P49802 495 aa11.15□□□□□ -0.62
LIG1-210ENST00000596332 ADKP55263 362 aaKnown RBP11.15□□□□□ -0.62
LIG1-210ENST00000596332 BPIFB4P59827 614 aa11.15□□□□□ -0.62
LIG1-210ENST00000596332 NOMO3P69849 1222 aa11.15□□□□□ -0.62
LIG1-210ENST00000596332 MRPS5P82675 430 aaKnown RBP11.15□□□□□ -0.62
LIG1-210ENST00000596332 CYP4F8P98187 520 aa11.15□□□□□ -0.62
LIG1-210ENST00000596332 TEAD2Q15562 447 aa11.15□□□□□ -0.62
LIG1-210ENST00000596332 PTPN20Q4JDL3 420 aa11.15□□□□□ -0.62
LIG1-210ENST00000596332 TAF3Q5VWG9 929 aa11.15□□□□□ -0.62
LIG1-210ENST00000596332 CES5AQ6NT32 575 aa11.15□□□□□ -0.62
LIG1-210ENST00000596332 HFE2Q6ZVN8 426 aa11.15□□□□□ -0.62
LIG1-210ENST00000596332 PASD1Q8IV76 773 aa11.15□□□□□ -0.62
LIG1-210ENST00000596332 SCML4Q8N228 414 aa11.15□□□□□ -0.62
LIG1-210ENST00000596332 TC2NQ8N9U0 490 aa11.15□□□□□ -0.62
LIG1-210ENST00000596332 CLEC4CQ8WTT0 213 aa11.15□□□□□ -0.62
LIG1-210ENST00000596332 ING5Q8WYH8 240 aa11.15□□□□□ -0.62
LIG1-210ENST00000596332 FGF13Q92913 245 aa11.15□□□□□ -0.62
LIG1-210ENST00000596332 RSPRY1Q96DX4 576 aa11.15□□□□□ -0.62
LIG1-210ENST00000596332 PIWIL1Q96J94 861 aaKnown RBP11.15□□□□□ -0.62
LIG1-210ENST00000596332 HSFY1Q96LI6 401 aa11.15□□□□□ -0.62
LIG1-210ENST00000596332 RIPOR3Q96MK2 946 aa11.15□□□□□ -0.62
LIG1-210ENST00000596332 CYP2S1Q96SQ9 504 aa11.15□□□□□ -0.62
LIG1-210ENST00000596332 AGPAT1Q99943 283 aa11.15□□□□□ -0.62
LIG1-210ENST00000596332 PHF7Q9BWX1 381 aaPredicted RBP11.15□□□□□ -0.62
LIG1-210ENST00000596332 RNF38Q9H0F5 515 aa11.15□□□□□ -0.62
LIG1-210ENST00000596332 HAUS4Q9H6D7 363 aa11.15□□□□□ -0.62
LIG1-210ENST00000596332 COMMD8Q9NX08 183 aa11.15□□□□□ -0.62
LIG1-210ENST00000596332 ARHGAP20Q9P2F6 1191 aa11.15□□□□□ -0.62
LIG1-210ENST00000596332 MAGED2Q9UNF1 606 aaPredicted RBP11.15□□□□□ -0.62
LIG1-210ENST00000596332 SCML2Q9UQR0 700 aa11.15□□□□□ -0.62
LIG1-210ENST00000596332 ATP8B3O60423 1300 aa11.14□□□□□ -0.63
LIG1-210ENST00000596332 TCRBV5S1A1TA0A578 114 aa11.14□□□□□ -0.63
LIG1-210ENST00000596332 C2orf78A6NCI8 922 aa11.14□□□□□ -0.63
LIG1-210ENST00000596332 M0QYV0 167 aa11.14□□□□□ -0.63
LIG1-210ENST00000596332 PIK3R2O00459 728 aa11.14□□□□□ -0.63
LIG1-210ENST00000596332 ADCY5O95622 1261 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms