RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 ANAPC1Q9H1A4 1944 aa18.8■□□□□ 0.6
SHKBP1-204ENST00000594862 FAM186AA6NE01 2351 aa18.8■□□□□ 0.6
SHKBP1-204ENST00000594862 ZNF840PA6NDX5 716 aa18.8■□□□□ 0.6
SHKBP1-204ENST00000594862 FGFR1OPO95684 399 aaKnown RBP18.8■□□□□ 0.6
SHKBP1-204ENST00000594862 TUBP50607 506 aa18.8■□□□□ 0.6
SHKBP1-204ENST00000594862 CACNA2D1P54289 1103 aa18.8■□□□□ 0.6
SHKBP1-204ENST00000594862 USP46P62068 366 aa18.8■□□□□ 0.6
SHKBP1-204ENST00000594862 TAF10Q12962 218 aa18.8■□□□□ 0.6
SHKBP1-204ENST00000594862 PAK1Q13153 545 aa18.8■□□□□ 0.6
SHKBP1-204ENST00000594862 ZNF77Q15935 545 aa18.8■□□□□ 0.6
SHKBP1-204ENST00000594862 ZNF528Q3MIS6 628 aa18.8■□□□□ 0.6
SHKBP1-204ENST00000594862 DGKKQ5KSL6 1271 aa18.8■□□□□ 0.6
SHKBP1-204ENST00000594862 KLHL10Q6JEL2 608 aa18.8■□□□□ 0.6
SHKBP1-204ENST00000594862 GPIHBP1Q8IV16 184 aa18.8■□□□□ 0.6
SHKBP1-204ENST00000594862 CPA6Q8N4T0 437 aa18.8■□□□□ 0.6
SHKBP1-204ENST00000594862 NELFBQ8WX92 580 aa18.8■□□□□ 0.6
SHKBP1-204ENST00000594862 FBXO32Q969P5 355 aa18.8■□□□□ 0.6
SHKBP1-204ENST00000594862 SLC35C1Q96A29 364 aa18.8■□□□□ 0.6
SHKBP1-204ENST00000594862 ZFYVE19Q96K21 471 aa18.8■□□□□ 0.6
SHKBP1-204ENST00000594862 CHRDQ9H2X0 955 aa18.8■□□□□ 0.6
SHKBP1-204ENST00000594862 GKN1Q9NS71 199 aa18.8■□□□□ 0.6
SHKBP1-204ENST00000594862 FAM86C1Q9NVL1 165 aa18.8■□□□□ 0.6
SHKBP1-204ENST00000594862 HMGXB4Q9UGU5 601 aa18.8■□□□□ 0.6
SHKBP1-204ENST00000594862 NDRG2Q9UN36 371 aaKnown RBP18.8■□□□□ 0.6
SHKBP1-204ENST00000594862 CCL26Q9Y258 94 aa18.8■□□□□ 0.6
SHKBP1-204ENST00000594862 MTF2Q9Y483 593 aaPredicted RBP18.8■□□□□ 0.6
SHKBP1-204ENST00000594862 COL4A3Q01955 1670 aa18.79■□□□□ 0.6
SHKBP1-204ENST00000594862 C2orf78A6NCI8 922 aa18.79■□□□□ 0.6
SHKBP1-204ENST00000594862 SHISA7A6NL88 538 aa18.79■□□□□ 0.6
SHKBP1-204ENST00000594862 PMM2O15305 246 aa18.79■□□□□ 0.6
SHKBP1-204ENST00000594862 LRRN2O75325 713 aa18.79■□□□□ 0.6
SHKBP1-204ENST00000594862 OLFM2O95897 454 aa18.79■□□□□ 0.6
SHKBP1-204ENST00000594862 CCDC130P13994 396 aa18.79■□□□□ 0.6
SHKBP1-204ENST00000594862 CD58P19256 250 aa18.79■□□□□ 0.6
SHKBP1-204ENST00000594862 TBXAS1P24557 533 aaPredicted RBP18.79■□□□□ 0.6
SHKBP1-204ENST00000594862 IFNAR2P48551 515 aa18.79■□□□□ 0.6
SHKBP1-204ENST00000594862 SLC5A3P53794 718 aa18.79■□□□□ 0.6
SHKBP1-204ENST00000594862 SLC7A9P82251 487 aa18.79■□□□□ 0.6
SHKBP1-204ENST00000594862 RUNX3Q13761 415 aa18.79■□□□□ 0.6
SHKBP1-204ENST00000594862 ISM2Q6H9L7 571 aa18.79■□□□□ 0.6
SHKBP1-204ENST00000594862 TTI2Q6NXR4 508 aa18.79■□□□□ 0.6
SHKBP1-204ENST00000594862 MAMSTRQ6ZN01 415 aa18.79■□□□□ 0.6
SHKBP1-204ENST00000594862 PAQR9Q6ZVX9 377 aa18.79■□□□□ 0.6
SHKBP1-204ENST00000594862 ZNF687Q8N1G0 1237 aa18.79■□□□□ 0.6
SHKBP1-204ENST00000594862 ARL14EPQ8N8R7 260 aaPredicted RBP18.79■□□□□ 0.6
SHKBP1-204ENST00000594862 OSCP1Q8WVF1 389 aa18.79■□□□□ 0.6
SHKBP1-204ENST00000594862 ATP2A3Q93084 1043 aa18.79■□□□□ 0.6
SHKBP1-204ENST00000594862 ELMO3Q96BJ8 720 aa18.79■□□□□ 0.6
SHKBP1-204ENST00000594862 FAM49BQ9NUQ9 324 aa18.79■□□□□ 0.6
SHKBP1-204ENST00000594862 TMEM30AQ9NV96 361 aa18.79■□□□□ 0.6
SHKBP1-204ENST00000594862 GTSE1Q9NYZ3 720 aa18.79■□□□□ 0.6
SHKBP1-204ENST00000594862 IL37Q9NZH6 218 aa18.79■□□□□ 0.6
SHKBP1-204ENST00000594862 CTNND2Q9UQB3 1225 aa18.79■□□□□ 0.6
SHKBP1-204ENST00000594862 FAM92AA1XBS5 289 aa18.78■□□□□ 0.6
SHKBP1-204ENST00000594862 PPP1R3GB7ZBB8 358 aa18.78■□□□□ 0.6
SHKBP1-204ENST00000594862 TNFRSF10BO14763 440 aa18.78■□□□□ 0.6
SHKBP1-204ENST00000594862 P4HA2O15460 535 aa18.78■□□□□ 0.6
SHKBP1-204ENST00000594862 OAS1P00973 400 aaKnown RBP18.78■□□□□ 0.6
SHKBP1-204ENST00000594862 CD44P16070 742 aaKnown RBP18.78■□□□□ 0.6
SHKBP1-204ENST00000594862 IFRD2Q12894 506 aaPredicted RBP18.78■□□□□ 0.6
SHKBP1-204ENST00000594862 SNX30Q5VWJ9 437 aa18.78■□□□□ 0.6
SHKBP1-204ENST00000594862 SYNPOQ8N3V7 929 aa18.78■□□□□ 0.6
SHKBP1-204ENST00000594862 SH3RF2Q8TEC5 729 aa18.78■□□□□ 0.6
SHKBP1-204ENST00000594862 SEMA4DQ92854 862 aa18.78■□□□□ 0.6
SHKBP1-204ENST00000594862 CYFIP2Q96F07 1278 aa18.78■□□□□ 0.6
SHKBP1-204ENST00000594862 SLC22A12Q96S37 553 aa18.78■□□□□ 0.6
SHKBP1-204ENST00000594862 KCNK16Q96T55 309 aa18.78■□□□□ 0.6
SHKBP1-204ENST00000594862 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.78■□□□□ 0.6
SHKBP1-204ENST00000594862 DUS2Q9NX74 493 aaKnown RBP18.78■□□□□ 0.6
SHKBP1-204ENST00000594862 KIAA1468Q9P260 1216 aa18.78■□□□□ 0.6
SHKBP1-204ENST00000594862 BIN1O00499 593 aa18.77■□□□□ 0.6
SHKBP1-204ENST00000594862 SLC9A3R1O14745 358 aaPredicted RBP18.77■□□□□ 0.6
SHKBP1-204ENST00000594862 ABL1P00519 1130 aa18.77■□□□□ 0.6
SHKBP1-204ENST00000594862 BMP6P22004 513 aa18.77■□□□□ 0.6
SHKBP1-204ENST00000594862 ADORA2BP29275 332 aa18.77■□□□□ 0.6
SHKBP1-204ENST00000594862 FMO5P49326 533 aa18.77■□□□□ 0.6
SHKBP1-204ENST00000594862 SLC8A3P57103 927 aa18.77■□□□□ 0.6
SHKBP1-204ENST00000594862 NR1H3Q13133 447 aa18.77■□□□□ 0.6
SHKBP1-204ENST00000594862 ORC1Q13415 861 aa18.77■□□□□ 0.6
SHKBP1-204ENST00000594862 CBWD6Q4V339 395 aa18.77■□□□□ 0.6
SHKBP1-204ENST00000594862 CBWD3Q5JTY5 395 aa18.77■□□□□ 0.6
SHKBP1-204ENST00000594862 CBWD5Q5RIA9 395 aa18.77■□□□□ 0.6
SHKBP1-204ENST00000594862 NKD2Q969F2 451 aaPredicted RBP18.77■□□□□ 0.6
SHKBP1-204ENST00000594862 TWNKQ96RR1 684 aa18.77■□□□□ 0.6
SHKBP1-204ENST00000594862 CYP2S1Q96SQ9 504 aa18.77■□□□□ 0.6
SHKBP1-204ENST00000594862 SMOQ99835 787 aa18.77■□□□□ 0.6
SHKBP1-204ENST00000594862 DUSP9Q99956 384 aaKnown RBP18.77■□□□□ 0.6
SHKBP1-204ENST00000594862 FAM126AQ9BYI3 521 aaPredicted RBP18.77■□□□□ 0.6
SHKBP1-204ENST00000594862 LMAN1LQ9HAT1 526 aa18.77■□□□□ 0.6
SHKBP1-204ENST00000594862 CISHQ9NSE2 258 aa18.77■□□□□ 0.6
SHKBP1-204ENST00000594862 WDR87Q6ZQQ6 2873 aa18.77■□□□□ 0.6
SHKBP1-204ENST00000594862 NFATC1O95644 943 aa18.76■□□□□ 0.59
SHKBP1-204ENST00000594862 SP9P0CG40 484 aa18.76■□□□□ 0.59
SHKBP1-204ENST00000594862 CCDC192P0DO97 292 aa18.76■□□□□ 0.59
SHKBP1-204ENST00000594862 CCR3P51677 355 aa18.76■□□□□ 0.59
SHKBP1-204ENST00000594862 MARSP56192 900 aaKnown RBP18.76■□□□□ 0.59
SHKBP1-204ENST00000594862 MAP3K7CLP57077 242 aa18.76■□□□□ 0.59
SHKBP1-204ENST00000594862 TNK2Q07912 1038 aa18.76■□□□□ 0.59
SHKBP1-204ENST00000594862 FZD5Q13467 585 aa18.76■□□□□ 0.59
SHKBP1-204ENST00000594862 CUL2Q13617 745 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms