RNA–Protein interactions for RNA: ENST00000594724.5

USE1-205, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-205ENST00000594724 DMAP1Q9NPF5 467 aaPredicted RBP15.65■□□□□ 0.1
USE1-205ENST00000594724 KIAA1468Q9P260 1216 aa15.65■□□□□ 0.1
USE1-205ENST00000594724 CHORDC1Q9UHD1 332 aaPredicted RBP15.65■□□□□ 0.1
USE1-205ENST00000594724 COQ4Q9Y3A0 265 aa15.65■□□□□ 0.1
USE1-205ENST00000594724 BICDL2A1A5D9 508 aa15.64■□□□□ 0.09
USE1-205ENST00000594724 SPECC1L-ADORA2AF8WAN1 911 aa15.64■□□□□ 0.09
USE1-205ENST00000594724 RTN3O95197 1032 aaPredicted RBP15.64■□□□□ 0.09
USE1-205ENST00000594724 ARSAP15289 507 aa15.64■□□□□ 0.09
USE1-205ENST00000594724 SLC5A3P53794 718 aa15.64■□□□□ 0.09
USE1-205ENST00000594724 ZXDBP98169 803 aa15.64■□□□□ 0.09
USE1-205ENST00000594724 PAK1Q13153 545 aa15.64■□□□□ 0.09
USE1-205ENST00000594724 ZNF77Q15935 545 aa15.64■□□□□ 0.09
USE1-205ENST00000594724 CC2D1AQ6P1N0 951 aaPredicted RBP15.64■□□□□ 0.09
USE1-205ENST00000594724 TXNDC11Q6PKC3 985 aa15.64■□□□□ 0.09
USE1-205ENST00000594724 SH3RF2Q8TEC5 729 aa15.64■□□□□ 0.09
USE1-205ENST00000594724 FBXO32Q969P5 355 aa15.64■□□□□ 0.09
USE1-205ENST00000594724 SLITRK1Q96PX8 696 aa15.64■□□□□ 0.09
USE1-205ENST00000594724 HNRNPABQ99729 332 aaKnown RBP15.64■□□□□ 0.09
USE1-205ENST00000594724 SRRTQ9BXP5 876 aaKnown RBP15.64■□□□□ 0.09
USE1-205ENST00000594724 RNF38Q9H0F5 515 aa15.64■□□□□ 0.09
USE1-205ENST00000594724 LMAN1LQ9HAT1 526 aa15.64■□□□□ 0.09
USE1-205ENST00000594724 HPS4Q9NQG7 708 aa15.64■□□□□ 0.09
USE1-205ENST00000594724 CISHQ9NSE2 258 aa15.64■□□□□ 0.09
USE1-205ENST00000594724 SPATA6Q9NWH7 488 aaPredicted RBP15.64■□□□□ 0.09
USE1-205ENST00000594724 OTOL1A6NHN0 477 aaPredicted RBP15.63■□□□□ 0.09
USE1-205ENST00000594724 FAM200BP0CF97 657 aa15.63■□□□□ 0.09
USE1-205ENST00000594724 CTHP32929 405 aa15.63■□□□□ 0.09
USE1-205ENST00000594724 PPP3CCP48454 512 aa15.63■□□□□ 0.09
USE1-205ENST00000594724 FMO5P49326 533 aa15.63■□□□□ 0.09
USE1-205ENST00000594724 MLLT6P55198 1093 aaPredicted RBP15.63■□□□□ 0.09
USE1-205ENST00000594724 LRMPQ12912 555 aa15.63■□□□□ 0.09
USE1-205ENST00000594724 RUNX3Q13761 415 aa15.63■□□□□ 0.09
USE1-205ENST00000594724 MTF1Q14872 753 aa15.63■□□□□ 0.09
USE1-205ENST00000594724 ITPRIPL2Q3MIP1 535 aa15.63■□□□□ 0.09
USE1-205ENST00000594724 MAML2Q8IZL2 1156 aaPredicted RBP15.63■□□□□ 0.09
USE1-205ENST00000594724 JAKMIP2Q96AA8 810 aa15.63■□□□□ 0.09
USE1-205ENST00000594724 HEXIM2Q96MH2 286 aaKnown RBP15.63■□□□□ 0.09
USE1-205ENST00000594724 CSNK1G1Q9HCP0 422 aa15.63■□□□□ 0.09
USE1-205ENST00000594724 IL37Q9NZH6 218 aa15.63■□□□□ 0.09
USE1-205ENST00000594724 ANAPC1Q9H1A4 1944 aa15.62■□□□□ 0.09
USE1-205ENST00000594724 ZNF638Q14966 1978 aaKnown RBP15.62■□□□□ 0.09
USE1-205ENST00000594724 TRIM21P19474 475 aaKnown RBP15.62■□□□□ 0.09
USE1-205ENST00000594724 RPS9P46781 194 aaKnown RBP15.62■□□□□ 0.09
USE1-205ENST00000594724 RAD23BP54727 409 aa15.62■□□□□ 0.09
USE1-205ENST00000594724 USP4Q13107 963 aa15.62■□□□□ 0.09
USE1-205ENST00000594724 PON2Q15165 354 aa15.62■□□□□ 0.09
USE1-205ENST00000594724 PPP1R26Q5T8A7 1209 aaPredicted RBP15.62■□□□□ 0.09
USE1-205ENST00000594724 FOXR2Q6PJQ5 311 aa15.62■□□□□ 0.09
USE1-205ENST00000594724 CLEC20AQ6ZU45 233 aa15.62■□□□□ 0.09
USE1-205ENST00000594724 GPRIN1Q7Z2K8 1008 aa15.62■□□□□ 0.09
USE1-205ENST00000594724 RALGPS2Q86X27 583 aaPredicted RBP15.62■□□□□ 0.09
USE1-205ENST00000594724 TRIML1Q8N9V2 468 aa15.62■□□□□ 0.09
USE1-205ENST00000594724 SLC4A11Q8NBS3 891 aa15.62■□□□□ 0.09
USE1-205ENST00000594724 TMEM176AQ96HP8 235 aa15.62■□□□□ 0.09
USE1-205ENST00000594724 FAXDC2Q96IV6 333 aa15.62■□□□□ 0.09
USE1-205ENST00000594724 LINC00597Q9H2U6 94 aa15.62■□□□□ 0.09
USE1-205ENST00000594724 RBM12Q9NTZ6 932 aaKnown RBP15.62■□□□□ 0.09
USE1-205ENST00000594724 DUS2Q9NX74 493 aaKnown RBP15.62■□□□□ 0.09
USE1-205ENST00000594724 SMPD4Q9NXE4 827 aa15.62■□□□□ 0.09
USE1-205ENST00000594724 GMIPQ9P107 970 aa15.62■□□□□ 0.09
USE1-205ENST00000594724 ARHGAP26Q9UNA1 814 aa15.62■□□□□ 0.09
USE1-205ENST00000594724 WNT6Q9Y6F9 365 aa15.62■□□□□ 0.09
USE1-205ENST00000594724 MIA3Q5JRA6 1907 aa15.62■□□□□ 0.09
USE1-205ENST00000594724 HHLA1C9JL84 531 aa15.61■□□□□ 0.09
USE1-205ENST00000594724 LEFTY2O00292 366 aa15.61■□□□□ 0.09
USE1-205ENST00000594724 LAMTOR5O43504 91 aa15.61■□□□□ 0.09
USE1-205ENST00000594724 OAS1P00973 400 aaKnown RBP15.61■□□□□ 0.09
USE1-205ENST00000594724 SP9P0CG40 484 aa15.61■□□□□ 0.09
USE1-205ENST00000594724 CHRNB1P11230 501 aa15.61■□□□□ 0.09
USE1-205ENST00000594724 NBL1P41271 181 aa15.61■□□□□ 0.09
USE1-205ENST00000594724 MAGEA9P43362 315 aa15.61■□□□□ 0.09
USE1-205ENST00000594724 PGFP49763 221 aa15.61■□□□□ 0.09
USE1-205ENST00000594724 PDE6CP51160 858 aa15.61■□□□□ 0.09
USE1-205ENST00000594724 SLC7A9P82251 487 aa15.61■□□□□ 0.09
USE1-205ENST00000594724 MTAPQ13126 283 aa15.61■□□□□ 0.09
USE1-205ENST00000594724 CUL2Q13617 745 aa15.61■□□□□ 0.09
USE1-205ENST00000594724 PDZD8Q8NEN9 1154 aa15.61■□□□□ 0.09
USE1-205ENST00000594724 OSCP1Q8WVF1 389 aa15.61■□□□□ 0.09
USE1-205ENST00000594724 OVCA2Q8WZ82 227 aa15.61■□□□□ 0.09
USE1-205ENST00000594724 MSANTD3Q96H12 275 aa15.61■□□□□ 0.09
USE1-205ENST00000594724 CLSTN2Q9H4D0 955 aa15.61■□□□□ 0.09
USE1-205ENST00000594724 COMMD8Q9NX08 183 aa15.61■□□□□ 0.09
USE1-205ENST00000594724 CPQQ9Y646 472 aa15.61■□□□□ 0.09
USE1-205ENST00000594724 FAM92AA1XBS5 289 aa15.6■□□□□ 0.09
USE1-205ENST00000594724 SCAMP3O14828 347 aaKnown RBP15.6■□□□□ 0.09
USE1-205ENST00000594724 COCHO43405 550 aa15.6■□□□□ 0.09
USE1-205ENST00000594724 OLFM2O95897 454 aa15.6■□□□□ 0.09
USE1-205ENST00000594724 MBL2P11226 248 aaPredicted RBP15.6■□□□□ 0.09
USE1-205ENST00000594724 TCF3P15923 654 aa15.6■□□□□ 0.09
USE1-205ENST00000594724 PFKLP17858 780 aa15.6■□□□□ 0.09
USE1-205ENST00000594724 IFNAR2P48551 515 aa15.6■□□□□ 0.09
USE1-205ENST00000594724 CSTF1Q05048 431 aaKnown RBP15.6■□□□□ 0.09
USE1-205ENST00000594724 PDGFRLQ15198 375 aa15.6■□□□□ 0.09
USE1-205ENST00000594724 HECTD3Q5T447 861 aa15.6■□□□□ 0.09
USE1-205ENST00000594724 CLEC17AQ6ZS10 378 aa15.6■□□□□ 0.09
USE1-205ENST00000594724 TRIM59Q8IWR1 403 aa15.6■□□□□ 0.09
USE1-205ENST00000594724 TTC39CQ8N584 583 aa15.6■□□□□ 0.09
USE1-205ENST00000594724 CHFRQ96EP1 664 aa15.6■□□□□ 0.09
USE1-205ENST00000594724 MED15Q96RN5 788 aa15.6■□□□□ 0.09
USE1-205ENST00000594724 DNAI2Q9GZS0 605 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms