RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 FLT3P36888 993 aa21.84■■□□□ 1.09
PNKP-203ENST00000593946 PAFAH1B1P43034 410 aa21.84■■□□□ 1.09
PNKP-203ENST00000593946 ZNF143P52747 638 aaPredicted RBP21.84■■□□□ 1.09
PNKP-203ENST00000593946 TAS2R40P59535 323 aa21.84■■□□□ 1.09
PNKP-203ENST00000593946 ADCY1Q08828 1119 aa21.84■■□□□ 1.09
PNKP-203ENST00000593946 TAF5Q15542 800 aa21.84■■□□□ 1.09
PNKP-203ENST00000593946 NFE2Q16621 373 aaPredicted RBP21.84■■□□□ 1.09
PNKP-203ENST00000593946 SPOUT1Q5T280 376 aaKnown RBP21.84■■□□□ 1.09
PNKP-203ENST00000593946 PSRC1Q6PGN9 363 aaPredicted RBP21.84■■□□□ 1.09
PNKP-203ENST00000593946 SPATA2LQ8IUW3 424 aaPredicted RBP21.84■■□□□ 1.09
PNKP-203ENST00000593946 ZNF558Q96NG5 402 aa21.84■■□□□ 1.09
PNKP-203ENST00000593946 YME1L1Q96TA2 773 aa21.84■■□□□ 1.09
PNKP-203ENST00000593946 LRRC4Q9HBW1 653 aa21.84■■□□□ 1.09
PNKP-203ENST00000593946 TTC7AQ9ULT0 858 aaPredicted RBP21.84■■□□□ 1.09
PNKP-203ENST00000593946 USTQ9Y2C2 406 aa21.84■■□□□ 1.09
PNKP-203ENST00000593946 CARNS1A5YM72 827 aa21.83■■□□□ 1.09
PNKP-203ENST00000593946 GRAP2O75791 330 aa21.83■■□□□ 1.09
PNKP-203ENST00000593946 LAG3P18627 525 aa21.83■■□□□ 1.09
PNKP-203ENST00000593946 GPD1P21695 349 aa21.83■■□□□ 1.09
PNKP-203ENST00000593946 RWDD2BP57060 319 aa21.83■■□□□ 1.09
PNKP-203ENST00000593946 RNASE9P60153 205 aaKnown RBP21.83■■□□□ 1.09
PNKP-203ENST00000593946 ITIH3Q06033 890 aa21.83■■□□□ 1.09
PNKP-203ENST00000593946 ACAP1Q15027 740 aa21.83■■□□□ 1.09
PNKP-203ENST00000593946 CC2D1AQ6P1N0 951 aaPredicted RBP21.83■■□□□ 1.09
PNKP-203ENST00000593946 ANKS3Q6ZW76 656 aa21.83■■□□□ 1.09
PNKP-203ENST00000593946 RHOT1Q8IXI2 618 aa21.83■■□□□ 1.09
PNKP-203ENST00000593946 SLC39A11Q8N1S5 342 aa21.83■■□□□ 1.09
PNKP-203ENST00000593946 FUBP3Q96I24 572 aaKnown RBP eCLIP21.83■■□□□ 1.09
PNKP-203ENST00000593946 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.83■■□□□ 1.093e-9■■■□□ 18.5
PNKP-203ENST00000593946 OXCT2Q9BYC2 517 aaPredicted RBP21.83■■□□□ 1.09
PNKP-203ENST00000593946 PNPLA8Q9NP80 782 aa21.83■■□□□ 1.09
PNKP-203ENST00000593946 H7C4K7 107 aa21.83■■□□□ 1.08
PNKP-203ENST00000593946 GJB5O95377 273 aa21.83■■□□□ 1.08
PNKP-203ENST00000593946 PDGFRAP16234 1089 aa21.83■■□□□ 1.08
PNKP-203ENST00000593946 TKTL1P51854 596 aa21.83■■□□□ 1.08
PNKP-203ENST00000593946 RABGGTBP53611 331 aa21.83■■□□□ 1.08
PNKP-203ENST00000593946 HTRA4P83105 476 aaPredicted RBP21.83■■□□□ 1.08
PNKP-203ENST00000593946 USP41Q3LFD5 358 aa21.83■■□□□ 1.08
PNKP-203ENST00000593946 RSRC2Q7L4I2 434 aaKnown RBP21.83■■□□□ 1.08
PNKP-203ENST00000593946 GPRIN1Q7Z2K8 1008 aa21.83■■□□□ 1.08
PNKP-203ENST00000593946 SIX6OS1Q8N1H7 587 aa21.83■■□□□ 1.08
PNKP-203ENST00000593946 ARFGAP1Q8N6T3 406 aa21.83■■□□□ 1.08
PNKP-203ENST00000593946 COLGALT1Q8NBJ5 622 aa21.83■■□□□ 1.08
PNKP-203ENST00000593946 RXFP2Q8WXD0 754 aa21.83■■□□□ 1.08
PNKP-203ENST00000593946 RNPC3Q96LT9 517 aaKnown RBP21.83■■□□□ 1.08
PNKP-203ENST00000593946 CNPY3Q9BT09 278 aa21.83■■□□□ 1.08
PNKP-203ENST00000593946 HTATIP2Q9BUP3 242 aa21.83■■□□□ 1.08
PNKP-203ENST00000593946 CXXC1Q9P0U4 656 aaPredicted RBP21.83■■□□□ 1.08
PNKP-203ENST00000593946 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.83■■□□□ 1.08
PNKP-203ENST00000593946 MYO16Q9Y6X6 1858 aa21.82■■□□□ 1.08
PNKP-203ENST00000593946 PGRMC1O00264 195 aaKnown RBP21.82■■□□□ 1.08
PNKP-203ENST00000593946 DPYSL4O14531 572 aa21.82■■□□□ 1.08
PNKP-203ENST00000593946 LRCH4O75427 683 aa21.82■■□□□ 1.08
PNKP-203ENST00000593946 FBXO21O94952 628 aa21.82■■□□□ 1.08
PNKP-203ENST00000593946 TCF4P15884 667 aa21.82■■□□□ 1.08
PNKP-203ENST00000593946 MRPS5P82675 430 aaKnown RBP21.82■■□□□ 1.08
PNKP-203ENST00000593946 EFHC1Q5JVL4 640 aa21.82■■□□□ 1.08
PNKP-203ENST00000593946 LRRC38Q5VT99 294 aa21.82■■□□□ 1.08
PNKP-203ENST00000593946 CNGB3Q9NQW8 809 aa21.82■■□□□ 1.08
PNKP-203ENST00000593946 CHST7Q9NS84 486 aa21.82■■□□□ 1.08
PNKP-203ENST00000593946 PYGMP11217 842 aa21.81■■□□□ 1.08
PNKP-203ENST00000593946 SYN1P17600 705 aa21.81■■□□□ 1.08
PNKP-203ENST00000593946 CYP2F1P24903 491 aa21.81■■□□□ 1.08
PNKP-203ENST00000593946 NDUFV1P49821 464 aa21.81■■□□□ 1.08
PNKP-203ENST00000593946 ZNF211Q13398 564 aaPredicted RBP21.81■■□□□ 1.08
PNKP-203ENST00000593946 RSPO2Q6UXX9 243 aaPredicted RBP21.81■■□□□ 1.08
PNKP-203ENST00000593946 SPATA4Q8NEY3 305 aa21.81■■□□□ 1.08
PNKP-203ENST00000593946 GOLGA1Q92805 767 aa21.81■■□□□ 1.08
PNKP-203ENST00000593946 ASNSD1Q9NWL6 643 aa21.81■■□□□ 1.08
PNKP-203ENST00000593946 ABI2Q9NYB9 513 aaPredicted RBP21.81■■□□□ 1.08
PNKP-203ENST00000593946 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.81■■□□□ 1.08
PNKP-203ENST00000593946 V9GYY5 206 aaPredicted RBP21.81■■□□□ 1.08
PNKP-203ENST00000593946 ZNF638Q14966 1978 aaKnown RBP21.81■■□□□ 1.08
PNKP-203ENST00000593946 GREB1Q4ZG55 1949 aa21.81■■□□□ 1.08
PNKP-203ENST00000593946 CCDC14Q49A88 953 aa21.8■■□□□ 1.08
PNKP-203ENST00000593946 KATNAL2Q8IYT4 538 aa21.8■■□□□ 1.08
PNKP-203ENST00000593946 PIK3R5Q8WYR1 880 aa21.8■■□□□ 1.08
PNKP-203ENST00000593946 HERVK_113Q902F9 699 aa21.8■■□□□ 1.08
PNKP-203ENST00000593946 TMEM169Q96HH4 297 aa21.8■■□□□ 1.08
PNKP-203ENST00000593946 ULBP1Q9BZM6 244 aa21.8■■□□□ 1.08
PNKP-203ENST00000593946 PCDHB5Q9Y5E4 795 aa21.8■■□□□ 1.08
PNKP-203ENST00000593946 COL4A4P53420 1690 aaPredicted RBP21.8■■□□□ 1.08
PNKP-203ENST00000593946 HSF2BPO75031 334 aa21.8■■□□□ 1.08
PNKP-203ENST00000593946 SOD2P04179 222 aa21.8■■□□□ 1.08
PNKP-203ENST00000593946 GLI1P08151 1106 aa21.8■■□□□ 1.08
PNKP-203ENST00000593946 SSR1P43307 286 aaKnown RBP21.8■■□□□ 1.08
PNKP-203ENST00000593946 DAOAP59103 153 aa21.8■■□□□ 1.08
PNKP-203ENST00000593946 SLC25A11Q02978 314 aaKnown RBP21.8■■□□□ 1.08
PNKP-203ENST00000593946 GPR17Q13304 367 aa21.8■■□□□ 1.08
PNKP-203ENST00000593946 NAA30Q147X3 362 aaPredicted RBP21.8■■□□□ 1.08
PNKP-203ENST00000593946 PRSS55Q6UWB4 352 aaPredicted RBP21.8■■□□□ 1.08
PNKP-203ENST00000593946 VSTM1Q6UX27 236 aa21.8■■□□□ 1.08
PNKP-203ENST00000593946 POLNQ7Z5Q5 900 aa21.8■■□□□ 1.08
PNKP-203ENST00000593946 NOA1Q8NC60 698 aaKnown RBP21.8■■□□□ 1.08
PNKP-203ENST00000593946 NDRG1Q92597 394 aaKnown RBP21.8■■□□□ 1.08
PNKP-203ENST00000593946 CFAP57Q96MR6 1250 aa21.8■■□□□ 1.08
PNKP-203ENST00000593946 SPG21Q9NZD8 308 aa21.8■■□□□ 1.08
PNKP-203ENST00000593946 MTRRQ9UBK8 725 aa21.8■■□□□ 1.08
PNKP-203ENST00000593946 PLXNA3P51805 1871 aa21.79■■□□□ 1.08
PNKP-203ENST00000593946 RNF8O76064 485 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms