RNA–Protein interactions for RNA: ENST00000592909.1

SMCO4P1-201, Transcript of single-pass membrane protein with coiled-coil domains 4 pseudogene 1, humanhuman

BASIC

Gene SMCO4P1, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4P1-201ENST00000592909 CALCOCO1Q9P1Z2 691 aa10.85□□□□□ -0.67
SMCO4P1-201ENST00000592909 SUSD2Q9UGT4 822 aa10.85□□□□□ -0.67
SMCO4P1-201ENST00000592909 TNRC6BQ9UPQ9 1833 aaKnown RBP10.85□□□□□ -0.67
SMCO4P1-201ENST00000592909 SCN1AP35498 2009 aa10.85□□□□□ -0.67
SMCO4P1-201ENST00000592909 LOC400499M0QZD8 3231 aa10.85□□□□□ -0.67
SMCO4P1-201ENST00000592909 ZNF638Q14966 1978 aaKnown RBP10.85□□□□□ -0.67
SMCO4P1-201ENST00000592909 PCDH15Q96QU1 1955 aa10.85□□□□□ -0.67
SMCO4P1-201ENST00000592909 ZNF840PA6NDX5 716 aa10.84□□□□□ -0.67
SMCO4P1-201ENST00000592909 ANKRD63C9JTQ0 380 aa10.84□□□□□ -0.67
SMCO4P1-201ENST00000592909 K7ENM7 598 aa10.84□□□□□ -0.67
SMCO4P1-201ENST00000592909 TK2O00142 265 aa10.84□□□□□ -0.67
SMCO4P1-201ENST00000592909 GABRDO14764 452 aa10.84□□□□□ -0.67
SMCO4P1-201ENST00000592909 HUS1O60921 280 aa10.84□□□□□ -0.67
SMCO4P1-201ENST00000592909 DKK1O94907 266 aa10.84□□□□□ -0.67
SMCO4P1-201ENST00000592909 ADH5P11766 374 aa10.84□□□□□ -0.67
SMCO4P1-201ENST00000592909 PPP3CCP48454 512 aa10.84□□□□□ -0.67
SMCO4P1-201ENST00000592909 LHX1P48742 406 aa10.84□□□□□ -0.67
SMCO4P1-201ENST00000592909 GTF2BQ00403 316 aa10.84□□□□□ -0.67
SMCO4P1-201ENST00000592909 GNL2Q13823 731 aaKnown RBP10.84□□□□□ -0.67
SMCO4P1-201ENST00000592909 PLEKHG6Q3KR16 790 aa10.84□□□□□ -0.67
SMCO4P1-201ENST00000592909 VSTM1Q6UX27 236 aa10.84□□□□□ -0.67
SMCO4P1-201ENST00000592909 CRELD2Q6UXH1 353 aaPredicted RBP10.84□□□□□ -0.67
SMCO4P1-201ENST00000592909 SCUBE3Q8IX30 993 aa10.84□□□□□ -0.67
SMCO4P1-201ENST00000592909 MYCT1Q8N699 235 aa10.84□□□□□ -0.67
SMCO4P1-201ENST00000592909 ZNF513Q8N8E2 541 aaPredicted RBP10.84□□□□□ -0.67
SMCO4P1-201ENST00000592909 HSPA12BQ96MM6 686 aa10.84□□□□□ -0.67
SMCO4P1-201ENST00000592909 UBL7Q96S82 380 aaPredicted RBP10.84□□□□□ -0.67
SMCO4P1-201ENST00000592909 FIZ1Q96SL8 496 aa10.84□□□□□ -0.67
SMCO4P1-201ENST00000592909 PLIN2Q99541 437 aa10.84□□□□□ -0.67
SMCO4P1-201ENST00000592909 TTLL2Q9BWV7 592 aa10.84□□□□□ -0.67
SMCO4P1-201ENST00000592909 PARVGQ9HBI0 331 aa10.84□□□□□ -0.67
SMCO4P1-201ENST00000592909 GDAP2Q9NXN4 497 aa10.84□□□□□ -0.67
SMCO4P1-201ENST00000592909 EHD2Q9NZN4 543 aa10.84□□□□□ -0.67
SMCO4P1-201ENST00000592909 TBC1D14Q9P2M4 693 aa10.84□□□□□ -0.67
SMCO4P1-201ENST00000592909 AGO2Q9UKV8 859 aaKnown RBP10.84□□□□□ -0.67
SMCO4P1-201ENST00000592909 PCOLCE2Q9UKZ9 415 aa10.84□□□□□ -0.67
SMCO4P1-201ENST00000592909 CPQQ9Y646 472 aa10.84□□□□□ -0.67
SMCO4P1-201ENST00000592909 OBSL1O75147 1896 aa10.83□□□□□ -0.68
SMCO4P1-201ENST00000592909 A0A1W2PQF6 199 aa10.83□□□□□ -0.68
SMCO4P1-201ENST00000592909 TBC1D3BA6NDS4 549 aa10.83□□□□□ -0.68
SMCO4P1-201ENST00000592909 ZBTB24O43167 697 aaPredicted RBP10.83□□□□□ -0.68
SMCO4P1-201ENST00000592909 TRAK2O60296 914 aa10.83□□□□□ -0.68
SMCO4P1-201ENST00000592909 IL18RAPO95256 599 aa10.83□□□□□ -0.68
SMCO4P1-201ENST00000592909 GNSP15586 552 aa10.83□□□□□ -0.68
SMCO4P1-201ENST00000592909 PCSK1P29120 753 aa10.83□□□□□ -0.68
SMCO4P1-201ENST00000592909 POLR2BP30876 1174 aaKnown RBP10.83□□□□□ -0.68
SMCO4P1-201ENST00000592909 NTSR1P30989 418 aa10.83□□□□□ -0.68
SMCO4P1-201ENST00000592909 GAD2Q05329 585 aa10.83□□□□□ -0.68
SMCO4P1-201ENST00000592909 KDSRQ06136 332 aa10.83□□□□□ -0.68
SMCO4P1-201ENST00000592909 CCDC142Q17RM4 750 aa10.83□□□□□ -0.68
SMCO4P1-201ENST00000592909 PREPLQ4J6C6 727 aaPredicted RBP10.83□□□□□ -0.68
SMCO4P1-201ENST00000592909 TMEM119Q4V9L6 283 aa10.83□□□□□ -0.68
SMCO4P1-201ENST00000592909 SYCP2LQ5T4T6 812 aa10.83□□□□□ -0.68
SMCO4P1-201ENST00000592909 C4orf50Q6ZRC1 276 aa10.83□□□□□ -0.68
SMCO4P1-201ENST00000592909 DENND5BQ6ZUT9 1274 aa10.83□□□□□ -0.68
SMCO4P1-201ENST00000592909 OSTM1Q86WC4 334 aa10.83□□□□□ -0.68
SMCO4P1-201ENST00000592909 DDX42Q86XP3 938 aaKnown RBP eCLIP10.83□□□□□ -0.68
SMCO4P1-201ENST00000592909 ETFBKMTQ8IXQ9 262 aa10.83□□□□□ -0.68
SMCO4P1-201ENST00000592909 TOP6BLQ8N6T0 577 aa10.83□□□□□ -0.68
SMCO4P1-201ENST00000592909 LRRC52Q8N7C0 313 aa10.83□□□□□ -0.68
SMCO4P1-201ENST00000592909 CXorf38Q8TB03 319 aa10.83□□□□□ -0.68
SMCO4P1-201ENST00000592909 FOXJ1Q92949 421 aa10.83□□□□□ -0.68
SMCO4P1-201ENST00000592909 REEP2Q9BRK0 252 aa10.83□□□□□ -0.68
SMCO4P1-201ENST00000592909 LLPHQ9BRT6 129 aaKnown RBP10.83□□□□□ -0.68
SMCO4P1-201ENST00000592909 CD248Q9HCU0 757 aa10.83□□□□□ -0.68
SMCO4P1-201ENST00000592909 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.83□□□□□ -0.68
SMCO4P1-201ENST00000592909 HCN2Q9UL51 889 aa10.83□□□□□ -0.68
SMCO4P1-201ENST00000592909 AGAP1Q9UPQ3 857 aa10.83□□□□□ -0.68
SMCO4P1-201ENST00000592909 STARD13Q9Y3M8 1113 aa10.83□□□□□ -0.68
SMCO4P1-201ENST00000592909 MAST4O15021 2626 aa10.83□□□□□ -0.68
SMCO4P1-201ENST00000592909 CELSR3Q9NYQ7 3312 aa10.83□□□□□ -0.68
SMCO4P1-201ENST00000592909 PLXNB3Q9ULL4 1909 aa10.82□□□□□ -0.68
SMCO4P1-201ENST00000592909 PLXND1Q9Y4D7 1925 aa10.82□□□□□ -0.68
SMCO4P1-201ENST00000592909 E2F8A0AVK6 867 aa10.82□□□□□ -0.68
SMCO4P1-201ENST00000592909 TISP43B9A030 160 aa10.82□□□□□ -0.68
SMCO4P1-201ENST00000592909 HOXC11O43248 304 aaPredicted RBP10.82□□□□□ -0.68
SMCO4P1-201ENST00000592909 FAM13AO94988 1023 aa10.82□□□□□ -0.68
SMCO4P1-201ENST00000592909 OAS1P00973 400 aaKnown RBP10.82□□□□□ -0.68
SMCO4P1-201ENST00000592909 ZNF883P0CG24 379 aa10.82□□□□□ -0.68
SMCO4P1-201ENST00000592909 HOXB2P14652 356 aa10.82□□□□□ -0.68
SMCO4P1-201ENST00000592909 USP46P62068 366 aa10.82□□□□□ -0.68
SMCO4P1-201ENST00000592909 CYP4F3Q08477 520 aa10.82□□□□□ -0.68
SMCO4P1-201ENST00000592909 GRIK2Q13002 908 aa10.82□□□□□ -0.68
SMCO4P1-201ENST00000592909 WDR45BQ5MNZ6 344 aa10.82□□□□□ -0.68
SMCO4P1-201ENST00000592909 LY6G5CQ5SRR4 150 aa10.82□□□□□ -0.68
SMCO4P1-201ENST00000592909 DBX2Q6ZNG2 339 aa10.82□□□□□ -0.68
SMCO4P1-201ENST00000592909 NUDT18Q6ZVK8 323 aa10.82□□□□□ -0.68
SMCO4P1-201ENST00000592909 RGL4Q8IZJ4 473 aa10.82□□□□□ -0.68
SMCO4P1-201ENST00000592909 C1orf127Q8N9H9 656 aa10.82□□□□□ -0.68
SMCO4P1-201ENST00000592909 CACTINQ8WUQ7 758 aaKnown RBP10.82□□□□□ -0.68
SMCO4P1-201ENST00000592909 OTUB2Q96DC9 234 aa10.82□□□□□ -0.68
SMCO4P1-201ENST00000592909 CDK5RAP3Q96JB5 506 aa10.82□□□□□ -0.68
SMCO4P1-201ENST00000592909 ST6GALNAC4Q9H4F1 302 aa10.82□□□□□ -0.68
SMCO4P1-201ENST00000592909 SMPD4Q9NXE4 827 aa10.82□□□□□ -0.68
SMCO4P1-201ENST00000592909 TOR4AQ9NXH8 423 aa10.82□□□□□ -0.68
SMCO4P1-201ENST00000592909 CFAP97Q9P2B7 532 aa10.82□□□□□ -0.68
SMCO4P1-201ENST00000592909 DEC1Q9P2X7 70 aa10.82□□□□□ -0.68
SMCO4P1-201ENST00000592909 MAGEC2Q9UBF1 373 aaPredicted RBP10.82□□□□□ -0.68
SMCO4P1-201ENST00000592909 CYP8B1Q9UNU6 501 aa10.82□□□□□ -0.68
SMCO4P1-201ENST00000592909 NFE2L3Q9Y4A8 694 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms