RNA–Protein interactions for RNA: ENST00000592839.6

SF3A2-207, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-207ENST00000592839 PRCPP42785 496 aa15.79■□□□□ 0.12
SF3A2-207ENST00000592839 CDH8P55286 799 aa15.79■□□□□ 0.12
SF3A2-207ENST00000592839 FKBP3Q00688 224 aaKnown RBP15.79■□□□□ 0.12
SF3A2-207ENST00000592839 AMPD2Q01433 879 aa15.79■□□□□ 0.12
SF3A2-207ENST00000592839 EML3Q32P44 896 aa15.79■□□□□ 0.12
SF3A2-207ENST00000592839 ZMIZ2Q8NF64 920 aa15.79■□□□□ 0.12
SF3A2-207ENST00000592839 SLITRK1Q96PX8 696 aa15.79■□□□□ 0.12
SF3A2-207ENST00000592839 IMPG2Q9BZV3 1241 aa15.79■□□□□ 0.12
SF3A2-207ENST00000592839 LMAN1LQ9HAT1 526 aa15.79■□□□□ 0.12
SF3A2-207ENST00000592839 APOBEC3GQ9HC16 384 aaKnown RBP15.79■□□□□ 0.12
SF3A2-207ENST00000592839 GKN1Q9NS71 199 aa15.79■□□□□ 0.12
SF3A2-207ENST00000592839 TRPM5Q9NZQ8 1165 aa15.79■□□□□ 0.12
SF3A2-207ENST00000592839 HOOK1Q9UJC3 728 aaKnown RBP15.79■□□□□ 0.12
SF3A2-207ENST00000592839 PCDHA5Q9Y5H7 936 aa15.79■□□□□ 0.12
SF3A2-207ENST00000592839 MYO16Q9Y6X6 1858 aa15.79■□□□□ 0.12
SF3A2-207ENST00000592839 CACNA1AO00555 2505 aa15.78■□□□□ 0.12
SF3A2-207ENST00000592839 C2orf78A6NCI8 922 aa15.78■□□□□ 0.12
SF3A2-207ENST00000592839 CHURC1-FNTBB4DL54 471 aa15.78■□□□□ 0.12
SF3A2-207ENST00000592839 CETN3O15182 167 aa15.78■□□□□ 0.12
SF3A2-207ENST00000592839 STX10O60499 249 aa15.78■□□□□ 0.12
SF3A2-207ENST00000592839 CKMP06732 381 aa15.78■□□□□ 0.12
SF3A2-207ENST00000592839 PIK3CAP42336 1068 aa15.78■□□□□ 0.12
SF3A2-207ENST00000592839 ID4P47928 161 aa15.78■□□□□ 0.12
SF3A2-207ENST00000592839 CDR1P51861 262 aa15.78■□□□□ 0.12
SF3A2-207ENST00000592839 KPNA1P52294 538 aaPredicted RBP15.78■□□□□ 0.12
SF3A2-207ENST00000592839 NDST1P52848 882 aa15.78■□□□□ 0.12
SF3A2-207ENST00000592839 ZXDBP98169 803 aa15.78■□□□□ 0.12
SF3A2-207ENST00000592839 TNK2Q07912 1038 aa15.78■□□□□ 0.12
SF3A2-207ENST00000592839 PPP2R5DQ14738 602 aa15.78■□□□□ 0.12
SF3A2-207ENST00000592839 ZNF276Q8N554 614 aa15.78■□□□□ 0.12
SF3A2-207ENST00000592839 WHAMMQ8TF30 809 aa15.78■□□□□ 0.12
SF3A2-207ENST00000592839 ATP2A3Q93084 1043 aa15.78■□□□□ 0.12
SF3A2-207ENST00000592839 HNRNPABQ99729 332 aaKnown RBP15.78■□□□□ 0.12
SF3A2-207ENST00000592839 NDRG2Q9UN36 371 aaKnown RBP15.78■□□□□ 0.12
SF3A2-207ENST00000592839 MAPK8IP1Q9UQF2 711 aa15.78■□□□□ 0.12
SF3A2-207ENST00000592839 DMXL1Q9Y485 3027 aa15.77■□□□□ 0.12
SF3A2-207ENST00000592839 MYH10P35580 1976 aa15.77■□□□□ 0.12
SF3A2-207ENST00000592839 CCDC163A0A0D9SF12 145 aa15.77■□□□□ 0.12
SF3A2-207ENST00000592839 GOLGA6L4A6NEF3 574 aa15.77■□□□□ 0.12
SF3A2-207ENST00000592839 TRIM49P0CI25 452 aa15.77■□□□□ 0.12
SF3A2-207ENST00000592839 TRIM49CP0CI26 452 aa15.77■□□□□ 0.12
SF3A2-207ENST00000592839 HDCP19113 662 aa15.77■□□□□ 0.12
SF3A2-207ENST00000592839 RAP1GAPP47736 663 aa15.77■□□□□ 0.12
SF3A2-207ENST00000592839 SOX9P48436 509 aa15.77■□□□□ 0.12
SF3A2-207ENST00000592839 GCLMP48507 274 aa15.77■□□□□ 0.12
SF3A2-207ENST00000592839 MXI1P50539 228 aa15.77■□□□□ 0.12
SF3A2-207ENST00000592839 SLC5A3P53794 718 aa15.77■□□□□ 0.12
SF3A2-207ENST00000592839 NRLP54845 237 aa15.77■□□□□ 0.12
SF3A2-207ENST00000592839 TAF10Q12962 218 aa15.77■□□□□ 0.12
SF3A2-207ENST00000592839 ERMP1Q7Z2K6 904 aa15.77■□□□□ 0.12
SF3A2-207ENST00000592839 SMYD4Q8IYR2 804 aaPredicted RBP15.77■□□□□ 0.12
SF3A2-207ENST00000592839 FBXL13Q8NEE6 735 aa15.77■□□□□ 0.12
SF3A2-207ENST00000592839 ZFRQ96KR1 1074 aaKnown RBP15.77■□□□□ 0.12
SF3A2-207ENST00000592839 SMOQ99835 787 aa15.77■□□□□ 0.12
SF3A2-207ENST00000592839 ECT2Q9H8V3 914 aa15.77■□□□□ 0.12
SF3A2-207ENST00000592839 HMGXB4Q9UGU5 601 aa15.77■□□□□ 0.12
SF3A2-207ENST00000592839 CEP250Q9BV73 2442 aa15.77■□□□□ 0.11
SF3A2-207ENST00000592839 HHLA1C9JL84 531 aa15.76■□□□□ 0.11
SF3A2-207ENST00000592839 K7ESF4 209 aa15.76■□□□□ 0.11
SF3A2-207ENST00000592839 CLDN5O00501 218 aa15.76■□□□□ 0.11
SF3A2-207ENST00000592839 KINO60870 393 aaKnown RBP15.76■□□□□ 0.11
SF3A2-207ENST00000592839 EPB41P11171 864 aaKnown RBP15.76■□□□□ 0.11
SF3A2-207ENST00000592839 DRD1P21728 446 aa15.76■□□□□ 0.11
SF3A2-207ENST00000592839 YWHAQP27348 245 aa15.76■□□□□ 0.11
SF3A2-207ENST00000592839 GJA4P35212 333 aa15.76■□□□□ 0.11
SF3A2-207ENST00000592839 EIF2DP41214 584 aaKnown RBP15.76■□□□□ 0.11
SF3A2-207ENST00000592839 FBXO43Q4G163 708 aa15.76■□□□□ 0.11
SF3A2-207ENST00000592839 SPOPLQ6IQ16 392 aa15.76■□□□□ 0.11
SF3A2-207ENST00000592839 CC2D1AQ6P1N0 951 aaPredicted RBP15.76■□□□□ 0.11
SF3A2-207ENST00000592839 DDX42Q86XP3 938 aaKnown RBP eCLIP15.76■□□□□ 0.11
SF3A2-207ENST00000592839 CPA6Q8N4T0 437 aa15.76■□□□□ 0.11
SF3A2-207ENST00000592839 ARL14EPQ8N8R7 260 aaPredicted RBP15.76■□□□□ 0.11
SF3A2-207ENST00000592839 SH3RF2Q8TEC5 729 aa15.76■□□□□ 0.11
SF3A2-207ENST00000592839 SMARCE1Q969G3 411 aa15.76■□□□□ 0.11
SF3A2-207ENST00000592839 EXOC4Q96A65 974 aa15.76■□□□□ 0.11
SF3A2-207ENST00000592839 DHTKD1Q96HY7 919 aaPredicted RBP15.76■□□□□ 0.11
SF3A2-207ENST00000592839 TWNKQ96RR1 684 aa15.76■□□□□ 0.11
SF3A2-207ENST00000592839 CYP2S1Q96SQ9 504 aa15.76■□□□□ 0.11
SF3A2-207ENST00000592839 KCNK16Q96T55 309 aa15.76■□□□□ 0.11
SF3A2-207ENST00000592839 NT5C1AQ9BXI3 368 aa15.76■□□□□ 0.11
SF3A2-207ENST00000592839 RNF38Q9H0F5 515 aa15.76■□□□□ 0.11
SF3A2-207ENST00000592839 EBF3Q9H4W6 596 aa15.76■□□□□ 0.11
SF3A2-207ENST00000592839 CYLDQ9NQC7 956 aa15.76■□□□□ 0.11
SF3A2-207ENST00000592839 R4GN57 208 aa15.76■□□□□ 0.11
SF3A2-207ENST00000592839 DNAH14Q0VDD8 3507 aa15.76■□□□□ 0.11
SF3A2-207ENST00000592839 TRIM21P19474 475 aaKnown RBP15.75■□□□□ 0.11
SF3A2-207ENST00000592839 CNR2P34972 360 aa15.75■□□□□ 0.11
SF3A2-207ENST00000592839 CXCL12P48061 93 aa15.75■□□□□ 0.11
SF3A2-207ENST00000592839 PMS1P54277 932 aaKnown RBP15.75■□□□□ 0.11
SF3A2-207ENST00000592839 MARSP56192 900 aaKnown RBP15.75■□□□□ 0.11
SF3A2-207ENST00000592839 CSTF1Q05048 431 aaKnown RBP15.75■□□□□ 0.11
SF3A2-207ENST00000592839 GAB4Q2WGN9 574 aa15.75■□□□□ 0.11
SF3A2-207ENST00000592839 TRIM68Q6AZZ1 485 aa15.75■□□□□ 0.11
SF3A2-207ENST00000592839 SMYD5Q6GMV2 418 aa15.75■□□□□ 0.11
SF3A2-207ENST00000592839 FSTL4Q6MZW2 842 aa15.75■□□□□ 0.11
SF3A2-207ENST00000592839 KLHDC10Q6PID8 442 aa15.75■□□□□ 0.11
SF3A2-207ENST00000592839 SCARA5Q6ZMJ2 495 aa15.75■□□□□ 0.11
SF3A2-207ENST00000592839 CLEC20AQ6ZU45 233 aa15.75■□□□□ 0.11
SF3A2-207ENST00000592839 ACOT1Q86TX2 421 aa15.75■□□□□ 0.11
SF3A2-207ENST00000592839 SLC2A14Q8TDB8 520 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms