RNA–Protein interactions for RNA: ENST00000592815.5

CIRBP-240, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-240ENST00000592815 KCNK16Q96T55 309 aa17.1■□□□□ 0.33
CIRBP-240ENST00000592815 SDCBP2Q9H190 292 aa17.1■□□□□ 0.33
CIRBP-240ENST00000592815 POLR3BQ9NW08 1133 aaPredicted RBP17.1■□□□□ 0.33
CIRBP-240ENST00000592815 SMPD4Q9NXE4 827 aa17.1■□□□□ 0.33
CIRBP-240ENST00000592815 DLL3Q9NYJ7 618 aa17.1■□□□□ 0.33
CIRBP-240ENST00000592815 FRMD4BQ9Y2L6 1034 aa17.1■□□□□ 0.33
CIRBP-240ENST00000592815 DENND4CQ5VZ89 1909 aa17.09■□□□□ 0.33
CIRBP-240ENST00000592815 ZNF638Q14966 1978 aaKnown RBP17.09■□□□□ 0.33
CIRBP-240ENST00000592815 CALUO43852 315 aaPredicted RBP17.09■□□□□ 0.33
CIRBP-240ENST00000592815 PRR29P0C7W0 189 aa17.09■□□□□ 0.33
CIRBP-240ENST00000592815 YWHAQP27348 245 aa17.09■□□□□ 0.33
CIRBP-240ENST00000592815 SLC7A9P82251 487 aa17.09■□□□□ 0.33
CIRBP-240ENST00000592815 LMNB2Q03252 620 aa17.09■□□□□ 0.33
CIRBP-240ENST00000592815 SV2AQ7L0J3 742 aa17.09■□□□□ 0.33
CIRBP-240ENST00000592815 ACOT1Q86TX2 421 aa17.09■□□□□ 0.33
CIRBP-240ENST00000592815 CCDC47Q96A33 483 aaKnown RBP17.09■□□□□ 0.33
CIRBP-240ENST00000592815 TNIP3Q96KP6 325 aa17.09■□□□□ 0.33
CIRBP-240ENST00000592815 CHORDC1Q9UHD1 332 aaPredicted RBP17.09■□□□□ 0.33
CIRBP-240ENST00000592815 ATP8B3O60423 1300 aa17.09■□□□□ 0.33
CIRBP-240ENST00000592815 KIF26AQ9ULI4 1882 aaPredicted RBP17.08■□□□□ 0.33
CIRBP-240ENST00000592815 FAM237AA0A1B0GTK4 181 aa17.08■□□□□ 0.32
CIRBP-240ENST00000592815 PRR5-ARHGAP8B1AHC4 643 aa17.08■□□□□ 0.32
CIRBP-240ENST00000592815 IKBKBO14920 756 aa17.08■□□□□ 0.32
CIRBP-240ENST00000592815 RTN3O95197 1032 aaPredicted RBP17.08■□□□□ 0.32
CIRBP-240ENST00000592815 KIF20AO95235 890 aa17.08■□□□□ 0.32
CIRBP-240ENST00000592815 NFATC1O95644 943 aa17.08■□□□□ 0.32
CIRBP-240ENST00000592815 P4HA1P13674 534 aa17.08■□□□□ 0.32
CIRBP-240ENST00000592815 ARHGAP8P85298 464 aa17.08■□□□□ 0.32
CIRBP-240ENST00000592815 ZACNQ401N2 412 aa17.08■□□□□ 0.32
CIRBP-240ENST00000592815 FBXO43Q4G163 708 aa17.08■□□□□ 0.32
CIRBP-240ENST00000592815 PAQR9Q6ZVX9 377 aa17.08■□□□□ 0.32
CIRBP-240ENST00000592815 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.08■□□□□ 0.32
CIRBP-240ENST00000592815 FAM35AQ86V20 835 aa17.08■□□□□ 0.32
CIRBP-240ENST00000592815 EZH1Q92800 747 aaPredicted RBP17.08■□□□□ 0.32
CIRBP-240ENST00000592815 SCAND2PQ9GZW5 306 aaPredicted RBP17.08■□□□□ 0.32
CIRBP-240ENST00000592815 MAPK8IP1Q9UQF2 711 aa17.08■□□□□ 0.32
CIRBP-240ENST00000592815 TRAF3IP3Q9Y228 551 aa17.08■□□□□ 0.32
CIRBP-240ENST00000592815 CPQQ9Y646 472 aa17.08■□□□□ 0.32
CIRBP-240ENST00000592815 SCAMP3O14828 347 aaKnown RBP17.07■□□□□ 0.32
CIRBP-240ENST00000592815 RHOBTB3O94955 611 aa17.07■□□□□ 0.32
CIRBP-240ENST00000592815 OAS1P00973 400 aaKnown RBP17.07■□□□□ 0.32
CIRBP-240ENST00000592815 MBL2P11226 248 aaPredicted RBP17.07■□□□□ 0.32
CIRBP-240ENST00000592815 SDHBP21912 280 aa17.07■□□□□ 0.32
CIRBP-240ENST00000592815 VAMP7P51809 220 aa17.07■□□□□ 0.32
CIRBP-240ENST00000592815 DPYDQ12882 1025 aa17.07■□□□□ 0.32
CIRBP-240ENST00000592815 ORC1Q13415 861 aa17.07■□□□□ 0.32
CIRBP-240ENST00000592815 C1orf220Q5T0J3 134 aa17.07■□□□□ 0.32
CIRBP-240ENST00000592815 SPOPLQ6IQ16 392 aa17.07■□□□□ 0.32
CIRBP-240ENST00000592815 KRBA2Q6ZNG9 492 aa17.07■□□□□ 0.32
CIRBP-240ENST00000592815 FILIP1Q7Z7B0 1213 aa17.07■□□□□ 0.32
CIRBP-240ENST00000592815 ADGRG2Q8IZP9 1017 aa17.07■□□□□ 0.32
CIRBP-240ENST00000592815 FAM160A2Q8N612 972 aaPredicted RBP17.07■□□□□ 0.32
CIRBP-240ENST00000592815 RPLP0P6Q8NHW5 317 aa17.07■□□□□ 0.32
CIRBP-240ENST00000592815 SCAMP5Q8TAC9 235 aa17.07■□□□□ 0.32
CIRBP-240ENST00000592815 TAF4BQ92750 862 aa17.07■□□□□ 0.32
CIRBP-240ENST00000592815 FBXO32Q969P5 355 aa17.07■□□□□ 0.32
CIRBP-240ENST00000592815 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.07■□□□□ 0.326e-9■■■■■ 134.6
CIRBP-240ENST00000592815 CFAP97Q9P2B7 532 aa17.07■□□□□ 0.32
CIRBP-240ENST00000592815 ATP6V1DQ9Y5K8 247 aa17.07■□□□□ 0.32
CIRBP-240ENST00000592815 GTF3C3Q9Y5Q9 886 aa17.07■□□□□ 0.32
CIRBP-240ENST00000592815 OBSL1O75147 1896 aa17.07■□□□□ 0.32
CIRBP-240ENST00000592815 CACNA1AO00555 2505 aa17.07■□□□□ 0.32
CIRBP-240ENST00000592815 CCDC163A0A0D9SF12 145 aa17.06■□□□□ 0.32
CIRBP-240ENST00000592815 A0A1W2PQ27 194 aa17.06■□□□□ 0.32
CIRBP-240ENST00000592815 A0A1W2PQ64 194 aa17.06■□□□□ 0.32
CIRBP-240ENST00000592815 A0A1W2PQD8 194 aa17.06■□□□□ 0.32
CIRBP-240ENST00000592815 SLC9A3R1O14745 358 aaPredicted RBP17.06■□□□□ 0.32
CIRBP-240ENST00000592815 RPP40O75818 363 aaKnown RBP17.06■□□□□ 0.32
CIRBP-240ENST00000592815 AP1G2O75843 785 aa17.06■□□□□ 0.32
CIRBP-240ENST00000592815 OLFM2O95897 454 aa17.06■□□□□ 0.32
CIRBP-240ENST00000592815 ASS1P00966 412 aaKnown RBP17.06■□□□□ 0.32
CIRBP-240ENST00000592815 HLA-DRAP01903 254 aa17.06■□□□□ 0.32
CIRBP-240ENST00000592815 PIK3CAP42336 1068 aa17.06■□□□□ 0.32
CIRBP-240ENST00000592815 NDST1P52848 882 aa17.06■□□□□ 0.32
CIRBP-240ENST00000592815 ATXN1P54253 815 aaKnown RBP17.06■□□□□ 0.32
CIRBP-240ENST00000592815 FUKQ8N0W3 1084 aa17.06■□□□□ 0.32
CIRBP-240ENST00000592815 CRYBG2Q8N1P7 616 aa17.06■□□□□ 0.32
CIRBP-240ENST00000592815 CAMKK1Q8N5S9 505 aa17.06■□□□□ 0.32
CIRBP-240ENST00000592815 PDZD8Q8NEN9 1154 aa17.06■□□□□ 0.32
CIRBP-240ENST00000592815 GAB3Q8WWW8 586 aa17.06■□□□□ 0.32
CIRBP-240ENST00000592815 SMARCD1Q96GM5 515 aa17.06■□□□□ 0.32
CIRBP-240ENST00000592815 HHIPQ96QV1 700 aa17.06■□□□□ 0.32
CIRBP-240ENST00000592815 GOLPH3LQ9H4A5 285 aa17.06■□□□□ 0.32
CIRBP-240ENST00000592815 DMAP1Q9NPF5 467 aaPredicted RBP17.06■□□□□ 0.32
CIRBP-240ENST00000592815 SEMA4GQ9NTN9 838 aa17.06■□□□□ 0.32
CIRBP-240ENST00000592815 CDV3Q9UKY7 258 aaKnown RBP17.06■□□□□ 0.32
CIRBP-240ENST00000592815 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.06■□□□□ 0.32
CIRBP-240ENST00000592815 MED19A0JLT2 244 aaPredicted RBP17.05■□□□□ 0.32
CIRBP-240ENST00000592815 TNFRSF10BO14763 440 aa17.05■□□□□ 0.32
CIRBP-240ENST00000592815 AXIN1O15169 862 aa17.05■□□□□ 0.32
CIRBP-240ENST00000592815 MAPK13O15264 365 aa17.05■□□□□ 0.32
CIRBP-240ENST00000592815 LRP3O75074 770 aa17.05■□□□□ 0.32
CIRBP-240ENST00000592815 AKAP3O75969 853 aa17.05■□□□□ 0.32
CIRBP-240ENST00000592815 ZNF202O95125 648 aa17.05■□□□□ 0.32
CIRBP-240ENST00000592815 CCDC192P0DO97 292 aa17.05■□□□□ 0.32
CIRBP-240ENST00000592815 CCDC130P13994 396 aa17.05■□□□□ 0.32
CIRBP-240ENST00000592815 NR2F2P24468 414 aa17.05■□□□□ 0.32
CIRBP-240ENST00000592815 OPRD1P41143 372 aa17.05■□□□□ 0.32
CIRBP-240ENST00000592815 GCLMP48507 274 aa17.05■□□□□ 0.32
CIRBP-240ENST00000592815 SLC5A3P53794 718 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms