RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 RAB23Q9ULC3 237 aa19.13■□□□□ 0.65
VAT1-208ENST00000590924 MYOFQ9NZM1 2061 aa19.13■□□□□ 0.65
VAT1-208ENST00000590924 HCRTO43612 131 aa19.12■□□□□ 0.65
VAT1-208ENST00000590924 C4BPAP04003 597 aaKnown RBP19.12■□□□□ 0.65
VAT1-208ENST00000590924 PRKCSHP14314 528 aaPredicted RBP19.12■□□□□ 0.65
VAT1-208ENST00000590924 HOXA6P31267 233 aa19.12■□□□□ 0.65
VAT1-208ENST00000590924 CNR2P34972 360 aa19.12■□□□□ 0.65
VAT1-208ENST00000590924 MAGEA11P43364 429 aa19.12■□□□□ 0.65
VAT1-208ENST00000590924 DLG4P78352 724 aa19.12■□□□□ 0.65
VAT1-208ENST00000590924 ANO6Q4KMQ2 910 aa19.12■□□□□ 0.65
VAT1-208ENST00000590924 C1orf220Q5T0J3 134 aa19.12■□□□□ 0.65
VAT1-208ENST00000590924 C4orf50Q6ZRC1 276 aa19.12■□□□□ 0.65
VAT1-208ENST00000590924 KBTBD7Q8WVZ9 684 aa19.12■□□□□ 0.65
VAT1-208ENST00000590924 CDH9Q9ULB4 789 aa19.12■□□□□ 0.65
VAT1-208ENST00000590924 PMM2O15305 246 aa19.11■□□□□ 0.65
VAT1-208ENST00000590924 TGM1P22735 817 aa19.11■□□□□ 0.65
VAT1-208ENST00000590924 MYL5Q02045 173 aa19.11■□□□□ 0.65
VAT1-208ENST00000590924 LMNB2Q03252 620 aa19.11■□□□□ 0.65
VAT1-208ENST00000590924 DMWDQ09019 674 aa19.11■□□□□ 0.65
VAT1-208ENST00000590924 MAPRE1Q15691 268 aaKnown RBP19.11■□□□□ 0.65
VAT1-208ENST00000590924 RSPO4Q2I0M5 234 aaPredicted RBP19.11■□□□□ 0.65
VAT1-208ENST00000590924 ZACNQ401N2 412 aa19.11■□□□□ 0.65
VAT1-208ENST00000590924 TMEM196Q5HYL7 178 aa19.11■□□□□ 0.65
VAT1-208ENST00000590924 LONP2Q86WA8 852 aa19.11■□□□□ 0.65
VAT1-208ENST00000590924 IRF2BP1Q8IU81 584 aa19.11■□□□□ 0.65
VAT1-208ENST00000590924 TRIM59Q8IWR1 403 aa19.11■□□□□ 0.65
VAT1-208ENST00000590924 RIN3Q8TB24 985 aa19.11■□□□□ 0.65
VAT1-208ENST00000590924 CHFRQ96EP1 664 aa19.11■□□□□ 0.65
VAT1-208ENST00000590924 SYT15Q9BQS2 421 aa19.11■□□□□ 0.65
VAT1-208ENST00000590924 EBF3Q9H4W6 596 aa19.11■□□□□ 0.65
VAT1-208ENST00000590924 C2orf42Q9NWW7 574 aa19.11■□□□□ 0.65
VAT1-208ENST00000590924 NFE2L3Q9Y4A8 694 aa19.11■□□□□ 0.65
VAT1-208ENST00000590924 OTOL1A6NHN0 477 aaPredicted RBP19.1■□□□□ 0.65
VAT1-208ENST00000590924 SMTNL1A8MU46 457 aa19.1■□□□□ 0.65
VAT1-208ENST00000590924 CHURC1-FNTBB4DL54 471 aa19.1■□□□□ 0.65
VAT1-208ENST00000590924 TRDMT1O14717 391 aaKnown RBP19.1■□□□□ 0.65
VAT1-208ENST00000590924 STAU1O95793 577 aaKnown RBP19.1■□□□□ 0.65
VAT1-208ENST00000590924 SDHBP21912 280 aa19.1■□□□□ 0.65
VAT1-208ENST00000590924 WARSP23381 471 aaKnown RBP19.1■□□□□ 0.65
VAT1-208ENST00000590924 LMO2P25791 158 aa19.1■□□□□ 0.65
VAT1-208ENST00000590924 ATICP31939 592 aa19.1■□□□□ 0.65
VAT1-208ENST00000590924 FNTBP49356 437 aa19.1■□□□□ 0.65
VAT1-208ENST00000590924 ZNF165P49910 485 aa19.1■□□□□ 0.65
VAT1-208ENST00000590924 PDGFRLQ15198 375 aa19.1■□□□□ 0.65
VAT1-208ENST00000590924 TRIM68Q6AZZ1 485 aa19.1■□□□□ 0.65
VAT1-208ENST00000590924 CC2D1AQ6P1N0 951 aaPredicted RBP19.1■□□□□ 0.65
VAT1-208ENST00000590924 VSTM1Q6UX27 236 aa19.1■□□□□ 0.65
VAT1-208ENST00000590924 SV2AQ7L0J3 742 aa19.1■□□□□ 0.65
VAT1-208ENST00000590924 SCN4BQ8IWT1 228 aa19.1■□□□□ 0.65
VAT1-208ENST00000590924 SLC35C1Q96A29 364 aa19.1■□□□□ 0.65
VAT1-208ENST00000590924 CEP295NLQ96MC4 621 aa19.1■□□□□ 0.65
VAT1-208ENST00000590924 TMEM8AQ9HCN3 771 aa19.1■□□□□ 0.65
VAT1-208ENST00000590924 SPTBN2O15020 2390 aa19.09■□□□□ 0.65
VAT1-208ENST00000590924 PRR5-ARHGAP8B1AHC4 643 aa19.09■□□□□ 0.65
VAT1-208ENST00000590924 PHACTR2O75167 634 aa19.09■□□□□ 0.65
VAT1-208ENST00000590924 ATP2C2O75185 946 aa19.09■□□□□ 0.65
VAT1-208ENST00000590924 USP17L7P0C7H9 530 aa19.09■□□□□ 0.65
VAT1-208ENST00000590924 PSMC1P62191 440 aaKnown RBP19.09■□□□□ 0.65
VAT1-208ENST00000590924 ARHGAP8P85298 464 aa19.09■□□□□ 0.65
VAT1-208ENST00000590924 AMPD2Q01433 879 aa19.09■□□□□ 0.65
VAT1-208ENST00000590924 PPP3CAQ08209 521 aa19.09■□□□□ 0.65
VAT1-208ENST00000590924 USP4Q13107 963 aa19.09■□□□□ 0.65
VAT1-208ENST00000590924 SIM2Q14190 667 aaPredicted RBP19.09■□□□□ 0.65
VAT1-208ENST00000590924 MTF1Q14872 753 aa19.09■□□□□ 0.65
VAT1-208ENST00000590924 ZNF77Q15935 545 aa19.09■□□□□ 0.65
VAT1-208ENST00000590924 LPAL2Q16609 132 aa19.09■□□□□ 0.65
VAT1-208ENST00000590924 TCERG1LQ5VWI1 586 aa19.09■□□□□ 0.65
VAT1-208ENST00000590924 TDRD10Q5VZ19 366 aaKnown RBP19.09■□□□□ 0.65
VAT1-208ENST00000590924 KRT39Q6A163 491 aa19.09■□□□□ 0.65
VAT1-208ENST00000590924 FSTL4Q6MZW2 842 aa19.09■□□□□ 0.65
VAT1-208ENST00000590924 PRR23BQ6ZRT6 265 aa19.09■□□□□ 0.65
VAT1-208ENST00000590924 TAF4BQ92750 862 aa19.09■□□□□ 0.65
VAT1-208ENST00000590924 MYLPFQ96A32 169 aa19.09■□□□□ 0.65
VAT1-208ENST00000590924 SPATA17Q96L03 361 aa19.09■□□□□ 0.65
VAT1-208ENST00000590924 CNOT6LQ96LI5 555 aaKnown RBP19.09■□□□□ 0.65
VAT1-208ENST00000590924 PARD6AQ9NPB6 346 aa19.09■□□□□ 0.65
VAT1-208ENST00000590924 CRTAC1Q9NQ79 661 aa19.09■□□□□ 0.65
VAT1-208ENST00000590924 MAGEC2Q9UBF1 373 aaPredicted RBP19.09■□□□□ 0.65
VAT1-208ENST00000590924 USP18Q9UMW8 372 aa19.09■□□□□ 0.65
VAT1-208ENST00000590924 NUP205Q92621 2012 aa19.08■□□□□ 0.65
VAT1-208ENST00000590924 TRAV19A0A0A6YYK7 116 aa19.08■□□□□ 0.64
VAT1-208ENST00000590924 MED19A0JLT2 244 aaPredicted RBP19.08■□□□□ 0.64
VAT1-208ENST00000590924 P4HA2O15460 535 aa19.08■□□□□ 0.64
VAT1-208ENST00000590924 HRO43593 1189 aa19.08■□□□□ 0.64
VAT1-208ENST00000590924 LRP3O75074 770 aa19.08■□□□□ 0.64
VAT1-208ENST00000590924 CST3P01034 146 aaPredicted RBP19.08■□□□□ 0.64
VAT1-208ENST00000590924 CKMP06732 381 aa19.08■□□□□ 0.64
VAT1-208ENST00000590924 RETP07949 1114 aa19.08■□□□□ 0.64
VAT1-208ENST00000590924 TRIM49P0CI25 452 aa19.08■□□□□ 0.64
VAT1-208ENST00000590924 TRIM49CP0CI26 452 aa19.08■□□□□ 0.64
VAT1-208ENST00000590924 ARSAP15289 507 aa19.08■□□□□ 0.64
VAT1-208ENST00000590924 EEF1GP26641 437 aaKnown RBP19.08■□□□□ 0.64
VAT1-208ENST00000590924 GRSF1Q12849 480 aaKnown RBP eCLIP19.08■□□□□ 0.64
VAT1-208ENST00000590924 TRPC3Q13507 836 aa19.08■□□□□ 0.64
VAT1-208ENST00000590924 CDKAL1Q5VV42 579 aa19.08■□□□□ 0.64
VAT1-208ENST00000590924 HEATR6Q6AI08 1181 aaKnown RBP19.08■□□□□ 0.64
VAT1-208ENST00000590924 LRSAM1Q6UWE0 723 aa19.08■□□□□ 0.64
VAT1-208ENST00000590924 SLC22A12Q96S37 553 aa19.08■□□□□ 0.64
VAT1-208ENST00000590924 MMS19Q96T76 1030 aa19.08■□□□□ 0.64
VAT1-208ENST00000590924 VRTNQ9H8Y1 702 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms