RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 CAPN11Q9UMQ6 739 aa20.21■□□□□ 0.83
DDX39A-214ENST00000590556 PCDHGC3Q9UN70 934 aa20.21■□□□□ 0.83
DDX39A-214ENST00000590556 LUC7L2Q9Y383 392 aaKnown RBP20.21■□□□□ 0.83
DDX39A-214ENST00000590556 PATJQ8NI35 1801 aa20.2■□□□□ 0.82
DDX39A-214ENST00000590556 TULP2O00295 520 aa20.2■□□□□ 0.82
DDX39A-214ENST00000590556 GYPCP04921 128 aa20.2■□□□□ 0.82
DDX39A-214ENST00000590556 CDC25CP30307 473 aa20.2■□□□□ 0.82
DDX39A-214ENST00000590556 PLA2G4AP47712 749 aa20.2■□□□□ 0.82
DDX39A-214ENST00000590556 TRIM14Q14142 442 aa20.2■□□□□ 0.82
DDX39A-214ENST00000590556 SFMBT2Q5VUG0 894 aa20.2■□□□□ 0.82
DDX39A-214ENST00000590556 GAREM2Q75VX8 874 aa20.2■□□□□ 0.82
DDX39A-214ENST00000590556 GET4Q7L5D6 327 aaPredicted RBP20.2■□□□□ 0.82
DDX39A-214ENST00000590556 GPRIN1Q7Z2K8 1008 aa20.2■□□□□ 0.82
DDX39A-214ENST00000590556 ZNF677Q86XU0 584 aa20.2■□□□□ 0.82
DDX39A-214ENST00000590556 PASD1Q8IV76 773 aa20.2■□□□□ 0.82
DDX39A-214ENST00000590556 SLC35F5Q8WV83 523 aa20.2■□□□□ 0.82
DDX39A-214ENST00000590556 ING5Q8WYH8 240 aa20.2■□□□□ 0.82
DDX39A-214ENST00000590556 NUCKS1Q9H1E3 243 aaKnown RBP20.2■□□□□ 0.82
DDX39A-214ENST00000590556 ATXN3LQ9H3M9 355 aa20.2■□□□□ 0.82
DDX39A-214ENST00000590556 FBXO44Q9H4M3 255 aa20.2■□□□□ 0.82
DDX39A-214ENST00000590556 IL21Q9HBE4 155 aa20.2■□□□□ 0.82
DDX39A-214ENST00000590556 IL37Q9NZH6 218 aa20.2■□□□□ 0.82
DDX39A-214ENST00000590556 ZNF638Q14966 1978 aaKnown RBP20.2■□□□□ 0.82
DDX39A-214ENST00000590556 DENND4AQ7Z401 1863 aa20.2■□□□□ 0.82
DDX39A-214ENST00000590556 A0A1W2PRU2 124 aa20.19■□□□□ 0.82
DDX39A-214ENST00000590556 F11P03951 625 aa20.19■□□□□ 0.82
DDX39A-214ENST00000590556 GJA1P17302 382 aa20.19■□□□□ 0.82
DDX39A-214ENST00000590556 GBP2P32456 591 aaPredicted RBP20.19■□□□□ 0.82
DDX39A-214ENST00000590556 GPD2P43304 727 aa20.19■□□□□ 0.82
DDX39A-214ENST00000590556 KIF11P52732 1056 aa20.19■□□□□ 0.82
DDX39A-214ENST00000590556 ZBED6P86452 979 aa20.19■□□□□ 0.82
DDX39A-214ENST00000590556 TAF10Q12962 218 aa20.19■□□□□ 0.82
DDX39A-214ENST00000590556 ASIC2Q16515 512 aa20.19■□□□□ 0.82
DDX39A-214ENST00000590556 PMF1Q6P1K2 205 aa20.19■□□□□ 0.82
DDX39A-214ENST00000590556 OTOP3Q7RTS5 596 aa20.19■□□□□ 0.82
DDX39A-214ENST00000590556 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.19■□□□□ 0.82
DDX39A-214ENST00000590556 SHKBP1Q8TBC3 707 aa20.19■□□□□ 0.82
DDX39A-214ENST00000590556 SLC20A1Q8WUM9 679 aa20.19■□□□□ 0.82
DDX39A-214ENST00000590556 DDX1Q92499 740 aaKnown RBP20.19■□□□□ 0.82
DDX39A-214ENST00000590556 FBXO32Q969P5 355 aa20.19■□□□□ 0.82
DDX39A-214ENST00000590556 MRFAP1L1Q96HT8 127 aa20.19■□□□□ 0.82
DDX39A-214ENST00000590556 SLITRK1Q96PX8 696 aa20.19■□□□□ 0.82
DDX39A-214ENST00000590556 LHX5Q9H2C1 402 aa20.19■□□□□ 0.82
DDX39A-214ENST00000590556 LRRC4Q9HBW1 653 aa20.19■□□□□ 0.82
DDX39A-214ENST00000590556 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.19■□□□□ 0.82
DDX39A-214ENST00000590556 AIPL1Q9NZN9 384 aa20.19■□□□□ 0.82
DDX39A-214ENST00000590556 NOCTQ9UK39 431 aaKnown RBP20.19■□□□□ 0.82
DDX39A-214ENST00000590556 CEP83Q9Y592 693 aa20.19■□□□□ 0.82
DDX39A-214ENST00000590556 XIRP2A4UGR9 3374 aa20.18■□□□□ 0.82
DDX39A-214ENST00000590556 NRG2O14511 850 aaPredicted RBP20.18■□□□□ 0.82
DDX39A-214ENST00000590556 MOSPD3O75425 235 aa20.18■□□□□ 0.82
DDX39A-214ENST00000590556 MMEP08473 750 aa20.18■□□□□ 0.82
DDX39A-214ENST00000590556 TPM1P09493 284 aa20.18■□□□□ 0.82
DDX39A-214ENST00000590556 BMP1P13497 986 aa20.18■□□□□ 0.82
DDX39A-214ENST00000590556 CEBPBP17676 345 aa20.18■□□□□ 0.82
DDX39A-214ENST00000590556 SP100P23497 879 aaPredicted RBP20.18■□□□□ 0.82
DDX39A-214ENST00000590556 CASP14P31944 242 aa20.18■□□□□ 0.82
DDX39A-214ENST00000590556 RGS7P49802 495 aa20.18■□□□□ 0.82
DDX39A-214ENST00000590556 TKTL1P51854 596 aa20.18■□□□□ 0.82
DDX39A-214ENST00000590556 CDR2Q01850 454 aa20.18■□□□□ 0.82
DDX39A-214ENST00000590556 TEAD2Q15562 447 aa20.18■□□□□ 0.82
DDX39A-214ENST00000590556 ARHGAP15Q53QZ3 475 aa20.18■□□□□ 0.82
DDX39A-214ENST00000590556 TMC6Q7Z403 805 aa20.18■□□□□ 0.82
DDX39A-214ENST00000590556 IRF2BP2Q7Z5L9 587 aa20.18■□□□□ 0.82
DDX39A-214ENST00000590556 TMEM150AQ86TG1 271 aa20.18■□□□□ 0.82
DDX39A-214ENST00000590556 KCTD13Q8WZ19 329 aa20.18■□□□□ 0.82
DDX39A-214ENST00000590556 RPGRIP1Q96KN7 1286 aa20.18■□□□□ 0.82
DDX39A-214ENST00000590556 TRPM5Q9NZQ8 1165 aa20.18■□□□□ 0.82
DDX39A-214ENST00000590556 NR2E1Q9Y466 385 aa20.18■□□□□ 0.82
DDX39A-214ENST00000590556 FAM92AA1XBS5 289 aa20.17■□□□□ 0.82
DDX39A-214ENST00000590556 CHRNB2P17787 502 aa20.17■□□□□ 0.82
DDX39A-214ENST00000590556 PPP3CCP48454 512 aa20.17■□□□□ 0.82
DDX39A-214ENST00000590556 RAB41Q5JT25 222 aa20.17■□□□□ 0.82
DDX39A-214ENST00000590556 PDZD8Q8NEN9 1154 aa20.17■□□□□ 0.82
DDX39A-214ENST00000590556 STK32AQ8WU08 396 aa20.17■□□□□ 0.82
DDX39A-214ENST00000590556 OVCA2Q8WZ82 227 aa20.17■□□□□ 0.82
DDX39A-214ENST00000590556 MRPS31Q92665 395 aaKnown RBP20.17■□□□□ 0.82
DDX39A-214ENST00000590556 SYN2Q92777 582 aaPredicted RBP20.17■□□□□ 0.82
DDX39A-214ENST00000590556 FGF13Q92913 245 aa20.17■□□□□ 0.82
DDX39A-214ENST00000590556 ACSF2Q96CM8 615 aaPredicted RBP20.17■□□□□ 0.82
DDX39A-214ENST00000590556 HSFY1Q96LI6 401 aa20.17■□□□□ 0.82
DDX39A-214ENST00000590556 MYADMQ96S97 322 aa20.17■□□□□ 0.82
DDX39A-214ENST00000590556 PRKAG3Q9UGI9 489 aa20.17■□□□□ 0.82
DDX39A-214ENST00000590556 CHORDC1Q9UHD1 332 aaPredicted RBP20.17■□□□□ 0.82
DDX39A-214ENST00000590556 CDH7Q9ULB5 785 aa20.17■□□□□ 0.82
DDX39A-214ENST00000590556 SCML2Q9UQR0 700 aa20.17■□□□□ 0.82
DDX39A-214ENST00000590556 USTQ9Y2C2 406 aa20.17■□□□□ 0.82
DDX39A-214ENST00000590556 TCF20Q9UGU0 1960 aaKnown RBP20.16■□□□□ 0.82
DDX39A-214ENST00000590556 LCP1P13796 627 aa20.16■□□□□ 0.82
DDX39A-214ENST00000590556 CYP4F8P98187 520 aa20.16■□□□□ 0.82
DDX39A-214ENST00000590556 ADIGQ0VDE8 80 aa20.16■□□□□ 0.82
DDX39A-214ENST00000590556 E4F1Q66K89 784 aaPredicted RBP20.16■□□□□ 0.82
DDX39A-214ENST00000590556 NPAS3Q8IXF0 933 aa20.16■□□□□ 0.82
DDX39A-214ENST00000590556 SIX6OS1Q8N1H7 587 aa20.16■□□□□ 0.82
DDX39A-214ENST00000590556 WDTC1Q8N5D0 677 aa20.16■□□□□ 0.82
DDX39A-214ENST00000590556 TDRD5Q8NAT2 981 aaKnown RBP20.16■□□□□ 0.82
DDX39A-214ENST00000590556 TMEM35BQ8NCS4 154 aa20.16■□□□□ 0.82
DDX39A-214ENST00000590556 MCRS1Q96EZ8 462 aa20.16■□□□□ 0.82
DDX39A-214ENST00000590556 NOX5Q96PH1 765 aa20.16■□□□□ 0.82
DDX39A-214ENST00000590556 AGPAT1Q99943 283 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms