RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 FMO5P49326 533 aa12.8□□□□□ -0.36
TPM4-212ENST00000590180 CETN1Q12798 172 aa12.8□□□□□ -0.36
TPM4-212ENST00000590180 ZNF268Q14587 947 aaPredicted RBP12.8□□□□□ -0.36
TPM4-212ENST00000590180 ITPRIPL2Q3MIP1 535 aa12.8□□□□□ -0.36
TPM4-212ENST00000590180 C1orf210Q8IVY1 113 aa12.8□□□□□ -0.36
TPM4-212ENST00000590180 TTC39CQ8N584 583 aa12.8□□□□□ -0.36
TPM4-212ENST00000590180 WHAMMQ8TF30 809 aa12.8□□□□□ -0.36
TPM4-212ENST00000590180 JAKMIP2Q96AA8 810 aa12.8□□□□□ -0.36
TPM4-212ENST00000590180 FAXDC2Q96IV6 333 aa12.8□□□□□ -0.36
TPM4-212ENST00000590180 PHOX2BQ99453 314 aa12.8□□□□□ -0.36
TPM4-212ENST00000590180 FAM83CQ9BQN1 747 aa12.8□□□□□ -0.36
TPM4-212ENST00000590180 EBF3Q9H4W6 596 aa12.8□□□□□ -0.36
TPM4-212ENST00000590180 CISHQ9NSE2 258 aa12.8□□□□□ -0.36
TPM4-212ENST00000590180 DLGAP2Q9P1A6 1054 aa12.8□□□□□ -0.36
TPM4-212ENST00000590180 COQ4Q9Y3A0 265 aa12.8□□□□□ -0.36
TPM4-212ENST00000590180 ZNF638Q14966 1978 aaKnown RBP12.8□□□□□ -0.36
TPM4-212ENST00000590180 SHISA7A6NL88 538 aa12.79□□□□□ -0.36
TPM4-212ENST00000590180 SPECC1L-ADORA2AF8WAN1 911 aa12.79□□□□□ -0.36
TPM4-212ENST00000590180 MBL2P11226 248 aaPredicted RBP12.79□□□□□ -0.36
TPM4-212ENST00000590180 PFKLP17858 780 aa12.79□□□□□ -0.36
TPM4-212ENST00000590180 IFNAR2P48551 515 aa12.79□□□□□ -0.36
TPM4-212ENST00000590180 SLC5A3P53794 718 aa12.79□□□□□ -0.36
TPM4-212ENST00000590180 MLLT6P55198 1093 aaPredicted RBP12.79□□□□□ -0.36
TPM4-212ENST00000590180 RUNX3Q13761 415 aa12.79□□□□□ -0.36
TPM4-212ENST00000590180 MTF1Q14872 753 aa12.79□□□□□ -0.36
TPM4-212ENST00000590180 PDGFRLQ15198 375 aa12.79□□□□□ -0.36
TPM4-212ENST00000590180 TRIM68Q6AZZ1 485 aa12.79□□□□□ -0.36
TPM4-212ENST00000590180 RALGPS2Q86X27 583 aaPredicted RBP12.79□□□□□ -0.36
TPM4-212ENST00000590180 PDZD8Q8NEN9 1154 aa12.79□□□□□ -0.36
TPM4-212ENST00000590180 ZMIZ2Q8NF64 920 aa12.79□□□□□ -0.36
TPM4-212ENST00000590180 SH3RF2Q8TEC5 729 aa12.79□□□□□ -0.36
TPM4-212ENST00000590180 CLDN23Q96B33 292 aa12.79□□□□□ -0.36
TPM4-212ENST00000590180 TMEM176AQ96HP8 235 aa12.79□□□□□ -0.36
TPM4-212ENST00000590180 RNF38Q9H0F5 515 aa12.79□□□□□ -0.36
TPM4-212ENST00000590180 CLSTN2Q9H4D0 955 aa12.79□□□□□ -0.36
TPM4-212ENST00000590180 COMMD8Q9NX08 183 aa12.79□□□□□ -0.36
TPM4-212ENST00000590180 DUS2Q9NX74 493 aaKnown RBP12.79□□□□□ -0.36
TPM4-212ENST00000590180 PTPRZ1P23471 2315 aaPredicted RBP12.79□□□□□ -0.36
TPM4-212ENST00000590180 KMT2EQ8IZD2 1858 aa12.78□□□□□ -0.36
TPM4-212ENST00000590180 LEFTY2O00292 366 aa12.78□□□□□ -0.36
TPM4-212ENST00000590180 TNFRSF10BO14763 440 aa12.78□□□□□ -0.36
TPM4-212ENST00000590180 LAMTOR5O43504 91 aa12.78□□□□□ -0.36
TPM4-212ENST00000590180 CCDC192P0DO97 292 aa12.78□□□□□ -0.36
TPM4-212ENST00000590180 ARSAP15289 507 aa12.78□□□□□ -0.36
TPM4-212ENST00000590180 MAGEA9P43362 315 aa12.78□□□□□ -0.36
TPM4-212ENST00000590180 RAD23BP54727 409 aa12.78□□□□□ -0.36
TPM4-212ENST00000590180 YWHAEP62258 255 aaKnown RBP12.78□□□□□ -0.36
TPM4-212ENST00000590180 AMPD2Q01433 879 aa12.78□□□□□ -0.36
TPM4-212ENST00000590180 KCNH2Q12809 1159 aa12.78□□□□□ -0.36
TPM4-212ENST00000590180 CUL2Q13617 745 aa12.78□□□□□ -0.36
TPM4-212ENST00000590180 PON2Q15165 354 aa12.78□□□□□ -0.36
TPM4-212ENST00000590180 TPD52L1Q16890 204 aaPredicted RBP12.78□□□□□ -0.36
TPM4-212ENST00000590180 HECTD3Q5T447 861 aa12.78□□□□□ -0.36
TPM4-212ENST00000590180 PPP1R26Q5T8A7 1209 aaPredicted RBP12.78□□□□□ -0.36
TPM4-212ENST00000590180 C1orf228Q6PIY5 440 aa12.78□□□□□ -0.36
TPM4-212ENST00000590180 FOXR2Q6PJQ5 311 aa12.78□□□□□ -0.36
TPM4-212ENST00000590180 SLC4A11Q8NBS3 891 aa12.78□□□□□ -0.36
TPM4-212ENST00000590180 OVCA2Q8WZ82 227 aa12.78□□□□□ -0.36
TPM4-212ENST00000590180 MSANTD3Q96H12 275 aa12.78□□□□□ -0.36
TPM4-212ENST00000590180 NT5C1BQ96P26 610 aa12.78□□□□□ -0.36
TPM4-212ENST00000590180 GBP4Q96PP9 640 aa12.78□□□□□ -0.36
TPM4-212ENST00000590180 ARID3AQ99856 593 aa12.78□□□□□ -0.36
TPM4-212ENST00000590180 DUSP16Q9BY84 665 aa12.78□□□□□ -0.36
TPM4-212ENST00000590180 NACA2Q9H009 215 aa12.78□□□□□ -0.36
TPM4-212ENST00000590180 LINC00597Q9H2U6 94 aa12.78□□□□□ -0.36
TPM4-212ENST00000590180 FBXO44Q9H4M3 255 aa12.78□□□□□ -0.36
TPM4-212ENST00000590180 CSNK1G1Q9HCP0 422 aa12.78□□□□□ -0.36
TPM4-212ENST00000590180 SMPD4Q9NXE4 827 aa12.78□□□□□ -0.36
TPM4-212ENST00000590180 IL37Q9NZH6 218 aa12.78□□□□□ -0.36
TPM4-212ENST00000590180 GMIPQ9P107 970 aa12.78□□□□□ -0.36
TPM4-212ENST00000590180 RWDD2AQ9UIY3 292 aa12.78□□□□□ -0.36
TPM4-212ENST00000590180 ARHGAP26Q9UNA1 814 aa12.78□□□□□ -0.36
TPM4-212ENST00000590180 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.78□□□□□ -0.36
TPM4-212ENST00000590180 CPQQ9Y646 472 aa12.78□□□□□ -0.36
TPM4-212ENST00000590180 WNT6Q9Y6F9 365 aa12.78□□□□□ -0.36
TPM4-212ENST00000590180 ZFHX2Q9C0A1 2572 aaPredicted RBP12.78□□□□□ -0.36
TPM4-212ENST00000590180 COL4A3Q01955 1670 aa12.77□□□□□ -0.36
TPM4-212ENST00000590180 CD19P15391 556 aa12.77□□□□□ -0.37
TPM4-212ENST00000590180 ACO1P21399 889 aaKnown RBP12.77□□□□□ -0.37
TPM4-212ENST00000590180 TBXAS1P24557 533 aaPredicted RBP12.77□□□□□ -0.37
TPM4-212ENST00000590180 CTHP32929 405 aa12.77□□□□□ -0.37
TPM4-212ENST00000590180 RPS9P46781 194 aaKnown RBP12.77□□□□□ -0.37
TPM4-212ENST00000590180 MRE11P49959 708 aa12.77□□□□□ -0.37
TPM4-212ENST00000590180 SLC7A9P82251 487 aa12.77□□□□□ -0.37
TPM4-212ENST00000590180 CSTF1Q05048 431 aaKnown RBP12.77□□□□□ -0.37
TPM4-212ENST00000590180 NR1H3Q13133 447 aa12.77□□□□□ -0.37
TPM4-212ENST00000590180 FZD5Q13467 585 aa12.77□□□□□ -0.37
TPM4-212ENST00000590180 ZNF77Q15935 545 aa12.77□□□□□ -0.37
TPM4-212ENST00000590180 TXNDC11Q6PKC3 985 aa12.77□□□□□ -0.37
TPM4-212ENST00000590180 CLEC20AQ6ZU45 233 aa12.77□□□□□ -0.37
TPM4-212ENST00000590180 MLKLQ8NB16 471 aa12.77□□□□□ -0.37
TPM4-212ENST00000590180 EHBP1Q8NDI1 1231 aa12.77□□□□□ -0.37
TPM4-212ENST00000590180 RIN3Q8TB24 985 aa12.77□□□□□ -0.37
TPM4-212ENST00000590180 OSCP1Q8WVF1 389 aa12.77□□□□□ -0.37
TPM4-212ENST00000590180 IPO9Q96P70 1041 aaKnown RBP12.77□□□□□ -0.37
TPM4-212ENST00000590180 NUP62CLQ9H1M0 184 aa12.77□□□□□ -0.37
TPM4-212ENST00000590180 HPS4Q9NQG7 708 aa12.77□□□□□ -0.37
TPM4-212ENST00000590180 LMBRD1Q9NUN5 540 aa12.77□□□□□ -0.37
TPM4-212ENST00000590180 PCDHB4Q9Y5E5 795 aa12.77□□□□□ -0.37
TPM4-212ENST00000590180 OTOL1A6NHN0 477 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms