RNA–Protein interactions for RNA: ENST00000589994.5

PRKACA-208, Transcript of protein kinase cAMP-activated catalytic subunit alpha, human

TSL 2 BASIC

Gene PRKACA, Length 1,127 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKACA-208	ENST00000589994	WARS	P23381	471 aa	Known RBP	13.53	□□□□□ -0.24
PRKACA-208	ENST00000589994	ANXA13	P27216	316 aa		13.53	□□□□□ -0.24
PRKACA-208	ENST00000589994	TIE1	P35590	1138 aa		13.53	□□□□□ -0.24
PRKACA-208	ENST00000589994	DHPS	P49366	369 aa	Predicted RBP	13.53	□□□□□ -0.24
PRKACA-208	ENST00000589994	SHC2	P98077	582 aa		13.53	□□□□□ -0.24
PRKACA-208	ENST00000589994	ZNF252P-AS1	Q0IIN9	211 aa		13.53	□□□□□ -0.24
PRKACA-208	ENST00000589994	NR1H3	Q13133	447 aa		13.53	□□□□□ -0.24
PRKACA-208	ENST00000589994	ALCAM	Q13740	583 aa		13.53	□□□□□ -0.24
PRKACA-208	ENST00000589994	EMC10	Q5UCC4	262 aa		13.53	□□□□□ -0.24
PRKACA-208	ENST00000589994	VSTM1	Q6UX27	236 aa		13.53	□□□□□ -0.24
PRKACA-208	ENST00000589994	CCDC73	Q6ZRK6	1079 aa		13.53	□□□□□ -0.24
PRKACA-208	ENST00000589994	HS2ST1	Q7LGA3	356 aa		13.53	□□□□□ -0.24
PRKACA-208	ENST00000589994	ALLC	Q8N6M5	410 aa		13.53	□□□□□ -0.24
PRKACA-208	ENST00000589994	SPATA18	Q8TC71	538 aa		13.53	□□□□□ -0.24
PRKACA-208	ENST00000589994	EXOC4	Q96A65	974 aa		13.53	□□□□□ -0.24
PRKACA-208	ENST00000589994	ELMO3	Q96BJ8	720 aa		13.53	□□□□□ -0.24
PRKACA-208	ENST00000589994	SPATA17	Q96L03	361 aa		13.53	□□□□□ -0.24
PRKACA-208	ENST00000589994	TTLL2	Q9BWV7	592 aa		13.53	□□□□□ -0.24
PRKACA-208	ENST00000589994	ZNF518B	Q9C0D4	1074 aa		13.53	□□□□□ -0.24
PRKACA-208	ENST00000589994	FOXD4L1	Q9NU39	408 aa		13.53	□□□□□ -0.24
PRKACA-208	ENST00000589994	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.53	□□□□□ -0.24
PRKACA-208	ENST00000589994	R3HCC1	Q9Y3T6	440 aa	Known RBP	13.53	□□□□□ -0.24
PRKACA-208	ENST00000589994	ATXN2	Q99700	1313 aa	Known RBP	13.53	□□□□□ -0.24
PRKACA-208	ENST00000589994	ZNF840P	A6NDX5	716 aa		13.52	□□□□□ -0.25
PRKACA-208	ENST00000589994	ZNF233	A6NK53	670 aa		13.52	□□□□□ -0.25
PRKACA-208	ENST00000589994	SGK1	O00141	431 aa		13.52	□□□□□ -0.25
PRKACA-208	ENST00000589994	CLIC2	O15247	247 aa		13.52	□□□□□ -0.25
PRKACA-208	ENST00000589994	CST3	P01034	146 aa	Predicted RBP	13.52	□□□□□ -0.25
PRKACA-208	ENST00000589994	DLAT	P10515	647 aa	Known RBP	13.52	□□□□□ -0.25
PRKACA-208	ENST00000589994	TCF3	P15923	654 aa		13.52	□□□□□ -0.25
PRKACA-208	ENST00000589994	FOXC1	Q12948	553 aa		13.52	□□□□□ -0.25
PRKACA-208	ENST00000589994	TAF10	Q12962	218 aa		13.52	□□□□□ -0.25
PRKACA-208	ENST00000589994	CUL4A	Q13619	759 aa		13.52	□□□□□ -0.25
PRKACA-208	ENST00000589994	USP39	Q53GS9	565 aa	Known RBP	13.52	□□□□□ -0.25
PRKACA-208	ENST00000589994	SH3PXD2A	Q5TCZ1	1133 aa		13.52	□□□□□ -0.25
PRKACA-208	ENST00000589994	DPH6	Q7L8W6	267 aa		13.52	□□□□□ -0.25
PRKACA-208	ENST00000589994	TRAPPC11	Q7Z392	1133 aa		13.52	□□□□□ -0.25
PRKACA-208	ENST00000589994	CYP2U1	Q7Z449	544 aa		13.52	□□□□□ -0.25
PRKACA-208	ENST00000589994	RASSF3	Q86WH2	238 aa		13.52	□□□□□ -0.25
PRKACA-208	ENST00000589994	TXNDC5	Q8NBS9	432 aa	Known RBP	13.52	□□□□□ -0.25
PRKACA-208	ENST00000589994	MYCBPAP	Q8TBZ2	947 aa		13.52	□□□□□ -0.25
PRKACA-208	ENST00000589994	CNOT6L	Q96LI5	555 aa	Known RBP	13.52	□□□□□ -0.25
PRKACA-208	ENST00000589994	CFAP97	Q9P2B7	532 aa		13.52	□□□□□ -0.25
PRKACA-208	ENST00000589994	TMEM131	Q92545	1883 aa		13.51	□□□□□ -0.25
PRKACA-208	ENST00000589994	CDX4	O14627	284 aa	Predicted RBP	13.51	□□□□□ -0.25
PRKACA-208	ENST00000589994	KLF8	O95600	359 aa	Predicted RBP	13.51	□□□□□ -0.25
PRKACA-208	ENST00000589994	OAS1	P00973	400 aa	Known RBP	13.51	□□□□□ -0.25
PRKACA-208	ENST00000589994	CASP1	P29466	404 aa		13.51	□□□□□ -0.25
PRKACA-208	ENST00000589994	CYP2J2	P51589	502 aa		13.51	□□□□□ -0.25
PRKACA-208	ENST00000589994	IRX4	P78413	519 aa		13.51	□□□□□ -0.25
PRKACA-208	ENST00000589994	SLC7A9	P82251	487 aa		13.51	□□□□□ -0.25
PRKACA-208	ENST00000589994	DHCR24	Q15392	516 aa		13.51	□□□□□ -0.25
PRKACA-208	ENST00000589994	CRY1	Q16526	586 aa		13.51	□□□□□ -0.25
PRKACA-208	ENST00000589994	SNRNP35	Q16560	246 aa	Known RBP	13.51	□□□□□ -0.25
PRKACA-208	ENST00000589994	DUOXA2	Q1HG44	320 aa		13.51	□□□□□ -0.25
PRKACA-208	ENST00000589994	UAP1L1	Q3KQV9	507 aa		13.51	□□□□□ -0.25
PRKACA-208	ENST00000589994	RHBDF2	Q6PJF5	856 aa		13.51	□□□□□ -0.25
PRKACA-208	ENST00000589994	WDR49	Q8IV35	697 aa		13.51	□□□□□ -0.25
PRKACA-208	ENST00000589994	NELFCD	Q8IXH7	590 aa		13.51	□□□□□ -0.25
PRKACA-208	ENST00000589994	CCDC65	Q8IXS2	484 aa		13.51	□□□□□ -0.25
PRKACA-208	ENST00000589994	IL17RC	Q8NAC3	791 aa		13.51	□□□□□ -0.25
PRKACA-208	ENST00000589994	OR6B3	Q8NGW1	331 aa		13.51	□□□□□ -0.25
PRKACA-208	ENST00000589994	PIGK	Q92643	395 aa		13.51	□□□□□ -0.25
PRKACA-208	ENST00000589994	WBP2	Q969T9	261 aa		13.51	□□□□□ -0.25
PRKACA-208	ENST00000589994	ERLEC1	Q96DZ1	483 aa		13.51	□□□□□ -0.25
PRKACA-208	ENST00000589994	GZF1	Q9H116	711 aa	Predicted RBP	13.51	□□□□□ -0.25
PRKACA-208	ENST00000589994	SNX25	Q9H3E2	840 aa		13.51	□□□□□ -0.25
PRKACA-208	ENST00000589994	UPF2	Q9HAU5	1272 aa	Known RBP	13.51	□□□□□ -0.25
PRKACA-208	ENST00000589994	TMEM9B	Q9NQ34	198 aa		13.51	□□□□□ -0.25
PRKACA-208	ENST00000589994	FSCN3	Q9NQT6	498 aa		13.51	□□□□□ -0.25
PRKACA-208	ENST00000589994	ATRX	P46100	2492 aa		13.5	□□□□□ -0.25
PRKACA-208	ENST00000589994	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		13.5	□□□□□ -0.25
PRKACA-208	ENST00000589994	TRIM66	O15016	1216 aa		13.5	□□□□□ -0.25
PRKACA-208	ENST00000589994	TGFB1I1	O43294	461 aa		13.5	□□□□□ -0.25
PRKACA-208	ENST00000589994	ADAM23	O75077	832 aa		13.5	□□□□□ -0.25
PRKACA-208	ENST00000589994	OLFM2	O95897	454 aa		13.5	□□□□□ -0.25
PRKACA-208	ENST00000589994	MBL2	P11226	248 aa	Predicted RBP	13.5	□□□□□ -0.25
PRKACA-208	ENST00000589994	PTPN1	P18031	435 aa	Known RBP	13.5	□□□□□ -0.25
PRKACA-208	ENST00000589994	TNNI1	P19237	187 aa		13.5	□□□□□ -0.25
PRKACA-208	ENST00000589994	GNL1	P36915	607 aa	Predicted RBP	13.5	□□□□□ -0.25
PRKACA-208	ENST00000589994	PTGER3	P43115	390 aa		13.5	□□□□□ -0.25
PRKACA-208	ENST00000589994	NOP14	P78316	857 aa	Known RBP	13.5	□□□□□ -0.25
PRKACA-208	ENST00000589994	SLC39A14	Q15043	492 aa		13.5	□□□□□ -0.25
PRKACA-208	ENST00000589994	MAPRE1	Q15691	268 aa	Known RBP	13.5	□□□□□ -0.25
PRKACA-208	ENST00000589994	E2F4	Q16254	413 aa		13.5	□□□□□ -0.25
PRKACA-208	ENST00000589994	SCARA5	Q6ZMJ2	495 aa		13.5	□□□□□ -0.25
PRKACA-208	ENST00000589994	TMEFF1	Q8IYR6	380 aa		13.5	□□□□□ -0.25
PRKACA-208	ENST00000589994	ADGRG2	Q8IZP9	1017 aa		13.5	□□□□□ -0.25
PRKACA-208	ENST00000589994	NAT16	Q8N8M0	369 aa		13.5	□□□□□ -0.25
PRKACA-208	ENST00000589994	DEFB124	Q8NES8	71 aa		13.5	□□□□□ -0.25
PRKACA-208	ENST00000589994	HMGB4	Q8WW32	186 aa		13.5	□□□□□ -0.25
PRKACA-208	ENST00000589994	ZNF516	Q92618	1163 aa		13.5	□□□□□ -0.25
PRKACA-208	ENST00000589994	CCDC127	Q96BQ5	260 aa		13.5	□□□□□ -0.25
PRKACA-208	ENST00000589994	ZFR	Q96KR1	1074 aa	Known RBP	13.5	□□□□□ -0.25
PRKACA-208	ENST00000589994	FNBP1	Q96RU3	617 aa		13.5	□□□□□ -0.25
PRKACA-208	ENST00000589994	PNKP	Q96T60	521 aa		13.5	□□□□□ -0.25
PRKACA-208	ENST00000589994	CGRRF1	Q99675	332 aa		13.5	□□□□□ -0.25
PRKACA-208	ENST00000589994	B3GNT5	Q9BYG0	378 aa		13.5	□□□□□ -0.25
PRKACA-208	ENST00000589994	TMEM74B	Q9NUR3	256 aa		13.5	□□□□□ -0.25
PRKACA-208	ENST00000589994	NXF1	Q9UBU9	619 aa	Known RBP	13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms