RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 CPQQ9Y646 472 aa16.27■□□□□ 0.2
ACTN4-211ENST00000589528 TCRBV21S2A2A0A5A6 115 aa16.26■□□□□ 0.19
ACTN4-211ENST00000589528 ANTXRLA6NF34 631 aa16.26■□□□□ 0.19
ACTN4-211ENST00000589528 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.26■□□□□ 0.19
ACTN4-211ENST00000589528 SGK1O00141 431 aa16.26■□□□□ 0.19
ACTN4-211ENST00000589528 SCAMP3O14828 347 aaKnown RBP16.26■□□□□ 0.19
ACTN4-211ENST00000589528 AP5Z1O43299 807 aa16.26■□□□□ 0.19
ACTN4-211ENST00000589528 PPP1R37O75864 691 aa16.26■□□□□ 0.19
ACTN4-211ENST00000589528 PDGFRBP09619 1106 aa16.26■□□□□ 0.19
ACTN4-211ENST00000589528 MBL2P11226 248 aaPredicted RBP16.26■□□□□ 0.19
ACTN4-211ENST00000589528 IDEP14735 1019 aa16.26■□□□□ 0.19
ACTN4-211ENST00000589528 TXLNAP40222 546 aa16.26■□□□□ 0.19
ACTN4-211ENST00000589528 EIF2DP41214 584 aaKnown RBP16.26■□□□□ 0.19
ACTN4-211ENST00000589528 PTGER3P43115 390 aa16.26■□□□□ 0.19
ACTN4-211ENST00000589528 SLC6A11P48066 632 aa16.26■□□□□ 0.19
ACTN4-211ENST00000589528 ZXDBP98169 803 aa16.26■□□□□ 0.19
ACTN4-211ENST00000589528 ACAP1Q15027 740 aa16.26■□□□□ 0.19
ACTN4-211ENST00000589528 SF3A1Q15459 793 aaKnown RBP16.26■□□□□ 0.19
ACTN4-211ENST00000589528 SV2BQ7L1I2 683 aa16.26■□□□□ 0.19
ACTN4-211ENST00000589528 DPH6Q7L8W6 267 aa16.26■□□□□ 0.19
ACTN4-211ENST00000589528 HS2ST1Q7LGA3 356 aa16.26■□□□□ 0.19
ACTN4-211ENST00000589528 ADGRG2Q8IZP9 1017 aa16.26■□□□□ 0.19
ACTN4-211ENST00000589528 HPDLQ96IR7 371 aa16.26■□□□□ 0.19
ACTN4-211ENST00000589528 FAM84AQ96KN4 292 aa16.26■□□□□ 0.19
ACTN4-211ENST00000589528 FNBP1Q96RU3 617 aa16.26■□□□□ 0.19
ACTN4-211ENST00000589528 KIF2CQ99661 725 aa16.26■□□□□ 0.19
ACTN4-211ENST00000589528 CFAP97Q9P2B7 532 aa16.26■□□□□ 0.19
ACTN4-211ENST00000589528 SIX4Q9UIU6 781 aa16.26■□□□□ 0.19
ACTN4-211ENST00000589528 SMC3Q9UQE7 1217 aa16.26■□□□□ 0.19
ACTN4-211ENST00000589528 MYH10P35580 1976 aa16.26■□□□□ 0.19
ACTN4-211ENST00000589528 SPAARA0A1B0GVQ0 90 aa16.25■□□□□ 0.19
ACTN4-211ENST00000589528 ZBTB24O43167 697 aaPredicted RBP16.25■□□□□ 0.19
ACTN4-211ENST00000589528 ADH5P11766 374 aa16.25■□□□□ 0.19
ACTN4-211ENST00000589528 LMO2P25791 158 aa16.25■□□□□ 0.19
ACTN4-211ENST00000589528 GRIA2P42262 883 aa16.25■□□□□ 0.19
ACTN4-211ENST00000589528 USP46P62068 366 aa16.25■□□□□ 0.19
ACTN4-211ENST00000589528 SLC7A9P82251 487 aa16.25■□□□□ 0.19
ACTN4-211ENST00000589528 GFPT1Q06210 699 aaPredicted RBP16.25■□□□□ 0.19
ACTN4-211ENST00000589528 IFRD2Q12894 506 aaPredicted RBP16.25■□□□□ 0.19
ACTN4-211ENST00000589528 ALCAMQ13740 583 aa16.25■□□□□ 0.19
ACTN4-211ENST00000589528 GAB4Q2WGN9 574 aa16.25■□□□□ 0.19
ACTN4-211ENST00000589528 SPDYCQ5MJ68 293 aa16.25■□□□□ 0.19
ACTN4-211ENST00000589528 TDRD10Q5VZ19 366 aaKnown RBP16.25■□□□□ 0.19
ACTN4-211ENST00000589528 BTBD8Q5XKL5 378 aa16.25■□□□□ 0.19
ACTN4-211ENST00000589528 LARP1BQ659C4 914 aaKnown RBP16.25■□□□□ 0.19
ACTN4-211ENST00000589528 SLC23A3Q6PIS1 610 aa16.25■□□□□ 0.19
ACTN4-211ENST00000589528 NUDT18Q6ZVK8 323 aa16.25■□□□□ 0.19
ACTN4-211ENST00000589528 TRMT11Q7Z4G4 463 aaKnown RBP16.25■□□□□ 0.19
ACTN4-211ENST00000589528 BRAPQ7Z569 592 aa16.25■□□□□ 0.19
ACTN4-211ENST00000589528 KIAA1958Q8N8K9 716 aa16.25■□□□□ 0.19
ACTN4-211ENST00000589528 CEP76Q8TAP6 659 aa16.25■□□□□ 0.19
ACTN4-211ENST00000589528 EPSTI1Q96J88 318 aa16.25■□□□□ 0.19
ACTN4-211ENST00000589528 SLITRK1Q96PX8 696 aa16.25■□□□□ 0.19
ACTN4-211ENST00000589528 CBWD1Q9BRT8 395 aa16.25■□□□□ 0.19
ACTN4-211ENST00000589528 STRA6Q9BX79 667 aa16.25■□□□□ 0.19
ACTN4-211ENST00000589528 SNX25Q9H3E2 840 aa16.25■□□□□ 0.19
ACTN4-211ENST00000589528 CRTAC1Q9NQ79 661 aa16.25■□□□□ 0.19
ACTN4-211ENST00000589528 TMEM74BQ9NUR3 256 aa16.25■□□□□ 0.19
ACTN4-211ENST00000589528 TBC1D14Q9P2M4 693 aa16.25■□□□□ 0.19
ACTN4-211ENST00000589528 LHX6Q9UPM6 363 aa16.25■□□□□ 0.19
ACTN4-211ENST00000589528 MSRB2Q9Y3D2 182 aa16.25■□□□□ 0.19
ACTN4-211ENST00000589528 ZFYVE26Q68DK2 2539 aa16.24■□□□□ 0.19
ACTN4-211ENST00000589528 TBC1D3BA6NDS4 549 aa16.24■□□□□ 0.19
ACTN4-211ENST00000589528 ZNF840PA6NDX5 716 aa16.24■□□□□ 0.19
ACTN4-211ENST00000589528 OPHN1O60890 802 aa16.24■□□□□ 0.19
ACTN4-211ENST00000589528 PRPF6O94906 941 aaKnown RBP16.24■□□□□ 0.19
ACTN4-211ENST00000589528 HOXB3P14651 431 aaPredicted RBP16.24■□□□□ 0.19
ACTN4-211ENST00000589528 HNRNPLP14866 589 aaKnown RBP eCLIP16.24■□□□□ 0.19
ACTN4-211ENST00000589528 ITPKAP23677 461 aa16.24■□□□□ 0.19
ACTN4-211ENST00000589528 HOXD12P35452 270 aa16.24■□□□□ 0.19
ACTN4-211ENST00000589528 TNFRSF4P43489 277 aa16.24■□□□□ 0.19
ACTN4-211ENST00000589528 RPL6Q02878 288 aaKnown RBP16.24■□□□□ 0.19
ACTN4-211ENST00000589528 RABEP1Q15276 862 aa16.24■□□□□ 0.19
ACTN4-211ENST00000589528 DUOXA1Q1HG43 343 aa16.24■□□□□ 0.19
ACTN4-211ENST00000589528 PREPLQ4J6C6 727 aaPredicted RBP16.24■□□□□ 0.19
ACTN4-211ENST00000589528 MDH1BQ5I0G3 518 aa16.24■□□□□ 0.19
ACTN4-211ENST00000589528 EMC10Q5UCC4 262 aa16.24■□□□□ 0.19
ACTN4-211ENST00000589528 RRAGBQ5VZM2 374 aa16.24■□□□□ 0.19
ACTN4-211ENST00000589528 SCARA3Q6AZY7 606 aa16.24■□□□□ 0.19
ACTN4-211ENST00000589528 RABEPKQ7Z6M1 372 aa16.24■□□□□ 0.19
ACTN4-211ENST00000589528 SFTPA1Q8IWL2 248 aa16.24■□□□□ 0.19
ACTN4-211ENST00000589528 GPD1LQ8N335 351 aa16.24■□□□□ 0.19
ACTN4-211ENST00000589528 FRMD1Q8N878 549 aa16.24■□□□□ 0.19
ACTN4-211ENST00000589528 CXorf38Q8TB03 319 aa16.24■□□□□ 0.19
ACTN4-211ENST00000589528 KBTBD7Q8WVZ9 684 aa16.24■□□□□ 0.19
ACTN4-211ENST00000589528 TMX3Q96JJ7 454 aa16.24■□□□□ 0.19
ACTN4-211ENST00000589528 TTLL2Q9BWV7 592 aa16.24■□□□□ 0.19
ACTN4-211ENST00000589528 RNF38Q9H0F5 515 aa16.24■□□□□ 0.19
ACTN4-211ENST00000589528 ZDHHC4Q9NPG8 344 aa16.24■□□□□ 0.19
ACTN4-211ENST00000589528 MBD1Q9UIS9 605 aaPredicted RBP16.24■□□□□ 0.19
ACTN4-211ENST00000589528 KLK13Q9UKR3 277 aa16.24■□□□□ 0.19
ACTN4-211ENST00000589528 AKAP13Q12802 2813 aa16.23■□□□□ 0.19
ACTN4-211ENST00000589528 F8VP50 259 aa16.23■□□□□ 0.19
ACTN4-211ENST00000589528 H0Y626 953 aa16.23■□□□□ 0.19
ACTN4-211ENST00000589528 TRIM16O95361 564 aa16.23■□□□□ 0.19
ACTN4-211ENST00000589528 WARSP23381 471 aaKnown RBP16.23■□□□□ 0.19
ACTN4-211ENST00000589528 NOP14P78316 857 aaKnown RBP16.23■□□□□ 0.19
ACTN4-211ENST00000589528 RING1Q06587 406 aa16.23■□□□□ 0.19
ACTN4-211ENST00000589528 TAF10Q12962 218 aa16.23■□□□□ 0.19
ACTN4-211ENST00000589528 SURF1Q15526 300 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms