RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 PPP2R2DQ66LE6 453 aa15.27■□□□□ 0.03
NPC1-207ENST00000588867 DCUN1D2Q6PH85 259 aa15.27■□□□□ 0.03
NPC1-207ENST00000588867 VSTM1Q6UX27 236 aa15.27■□□□□ 0.03
NPC1-207ENST00000588867 SIX6OS1Q8N1H7 587 aa15.27■□□□□ 0.03
NPC1-207ENST00000588867 C3orf20Q8ND61 904 aa15.27■□□□□ 0.03
NPC1-207ENST00000588867 C2orf15Q8WU43 125 aaKnown RBP15.27■□□□□ 0.03
NPC1-207ENST00000588867 UBXN6Q9BZV1 441 aa15.27■□□□□ 0.03
NPC1-207ENST00000588867 SLC28A3Q9HAS3 691 aa15.27■□□□□ 0.03
NPC1-207ENST00000588867 ABCB6Q9NP58 842 aa15.27■□□□□ 0.03
NPC1-207ENST00000588867 CYLDQ9NQC7 956 aa15.27■□□□□ 0.03
NPC1-207ENST00000588867 TLR9Q9NR96 1032 aa15.27■□□□□ 0.03
NPC1-207ENST00000588867 PAPSS1O43252 624 aaPredicted RBP15.26■□□□□ 0.03
NPC1-207ENST00000588867 VNN2O95498 520 aa15.26■□□□□ 0.03
NPC1-207ENST00000588867 CNPP09543 421 aaKnown RBP15.26■□□□□ 0.03
NPC1-207ENST00000588867 KRT3P12035 628 aa15.26■□□□□ 0.03
NPC1-207ENST00000588867 RPL34P49207 117 aaKnown RBP15.26■□□□□ 0.03
NPC1-207ENST00000588867 GPR15P49685 360 aa15.26■□□□□ 0.03
NPC1-207ENST00000588867 UBE3AQ05086 875 aa15.26■□□□□ 0.03
NPC1-207ENST00000588867 IFRD2Q12894 506 aaPredicted RBP15.26■□□□□ 0.03
NPC1-207ENST00000588867 GPM6BQ13491 265 aa15.26■□□□□ 0.03
NPC1-207ENST00000588867 RAB33AQ14088 237 aa15.26■□□□□ 0.03
NPC1-207ENST00000588867 CHRDL2Q6WN34 429 aa15.26■□□□□ 0.03
NPC1-207ENST00000588867 GPRIN1Q7Z2K8 1008 aa15.26■□□□□ 0.03
NPC1-207ENST00000588867 GPR65Q8IYL9 337 aa15.26■□□□□ 0.03
NPC1-207ENST00000588867 CLEC4CQ8WTT0 213 aa15.26■□□□□ 0.03
NPC1-207ENST00000588867 BTBD6Q96KE9 485 aa15.26■□□□□ 0.03
NPC1-207ENST00000588867 ALS2CR12Q96Q35 445 aa15.26■□□□□ 0.03
NPC1-207ENST00000588867 CRISPLD1Q9H336 500 aa15.26■□□□□ 0.03
NPC1-207ENST00000588867 METTL5Q9NRN9 209 aaKnown RBP15.26■□□□□ 0.03
NPC1-207ENST00000588867 FNIP2Q9P278 1114 aa15.26■□□□□ 0.03
NPC1-207ENST00000588867 ANAPC7Q9UJX3 599 aa15.26■□□□□ 0.03
NPC1-207ENST00000588867 TMEM110-MUSTN1A8MSY1 372 aa15.26■□□□□ 0.03
NPC1-207ENST00000588867 HHLA1C9JL84 531 aa15.26■□□□□ 0.03
NPC1-207ENST00000588867 TRIM66O15016 1216 aa15.26■□□□□ 0.03
NPC1-207ENST00000588867 LPXNO60711 386 aa15.26■□□□□ 0.03
NPC1-207ENST00000588867 PALMO75781 387 aa15.26■□□□□ 0.03
NPC1-207ENST00000588867 GRAP2O75791 330 aa15.26■□□□□ 0.03
NPC1-207ENST00000588867 ABLIM3O94929 683 aa15.26■□□□□ 0.03
NPC1-207ENST00000588867 TNNT1P13805 278 aa15.26■□□□□ 0.03
NPC1-207ENST00000588867 MAGEA11P43364 429 aa15.26■□□□□ 0.03
NPC1-207ENST00000588867 RPL7AP62424 266 aaKnown RBP15.26■□□□□ 0.03
NPC1-207ENST00000588867 SLC6A3Q01959 620 aa15.26■□□□□ 0.03
NPC1-207ENST00000588867 SMC1AQ14683 1233 aaKnown RBP15.26■□□□□ 0.03
NPC1-207ENST00000588867 DNTTIP2Q5QJE6 756 aaKnown RBP15.26■□□□□ 0.03
NPC1-207ENST00000588867 TPGS2Q68CL5 300 aa15.26■□□□□ 0.03
NPC1-207ENST00000588867 SYT10Q6XYQ8 523 aa15.26■□□□□ 0.03
NPC1-207ENST00000588867 SLC35F6Q8N357 371 aa15.26■□□□□ 0.03
NPC1-207ENST00000588867 TPCN2Q8NHX9 752 aa15.26■□□□□ 0.03
NPC1-207ENST00000588867 FEZF2Q8TBJ5 459 aa15.26■□□□□ 0.03
NPC1-207ENST00000588867 GPR152Q8TDT2 470 aa15.26■□□□□ 0.03
NPC1-207ENST00000588867 ARNTL2Q8WYA1 636 aa15.26■□□□□ 0.03
NPC1-207ENST00000588867 NDRG1Q92597 394 aaKnown RBP15.26■□□□□ 0.03
NPC1-207ENST00000588867 ZNF592Q92610 1267 aa15.26■□□□□ 0.03
NPC1-207ENST00000588867 MCRS1Q96EZ8 462 aa15.26■□□□□ 0.03
NPC1-207ENST00000588867 MCEEQ96PE7 176 aa15.26■□□□□ 0.03
NPC1-207ENST00000588867 CYP4F11Q9HBI6 524 aa15.26■□□□□ 0.03
NPC1-207ENST00000588867 RXFP1Q9HBX9 757 aa15.26■□□□□ 0.03
NPC1-207ENST00000588867 AFF4Q9UHB7 1163 aaKnown RBP15.26■□□□□ 0.03
NPC1-207ENST00000588867 PCDHGC5Q9Y5F6 944 aa15.26■□□□□ 0.03
NPC1-207ENST00000588867 TCRBV5S1A1TA0A578 114 aa15.25■□□□□ 0.03
NPC1-207ENST00000588867 SIGLEC16A6NMB1 481 aa15.25■□□□□ 0.03
NPC1-207ENST00000588867 HIDE1A8MVS5 230 aa15.25■□□□□ 0.03
NPC1-207ENST00000588867 HAPLN1P10915 354 aaPredicted RBP15.25■□□□□ 0.03
NPC1-207ENST00000588867 ATF2P15336 505 aa15.25■□□□□ 0.03
NPC1-207ENST00000588867 ELF1P32519 619 aa15.25■□□□□ 0.03
NPC1-207ENST00000588867 ETF1P62495 437 aaKnown RBP15.25■□□□□ 0.03
NPC1-207ENST00000588867 MESDQ14696 234 aa15.25■□□□□ 0.03
NPC1-207ENST00000588867 TCEAL1Q15170 157 aa15.25■□□□□ 0.03
NPC1-207ENST00000588867 DAAM2Q86T65 1068 aa15.25■□□□□ 0.03
NPC1-207ENST00000588867 ZDHHC17Q8IUH5 632 aa15.25■□□□□ 0.03
NPC1-207ENST00000588867 MRPL43Q8N983 215 aaKnown RBP15.25■□□□□ 0.03
NPC1-207ENST00000588867 STKLD1Q8NE28 680 aa15.25■□□□□ 0.03
NPC1-207ENST00000588867 TRIM58Q8NG06 486 aa15.25■□□□□ 0.03
NPC1-207ENST00000588867 SCAMP5Q8TAC9 235 aa15.25■□□□□ 0.03
NPC1-207ENST00000588867 PIWIL1Q96J94 861 aaKnown RBP15.25■□□□□ 0.03
NPC1-207ENST00000588867 C8orf48Q96LL4 319 aa15.25■□□□□ 0.03
NPC1-207ENST00000588867 WDR24Q96S15 920 aa15.25■□□□□ 0.03
NPC1-207ENST00000588867 EMILIN2Q9BXX0 1053 aa15.25■□□□□ 0.03
NPC1-207ENST00000588867 ULBP1Q9BZM6 244 aa15.25■□□□□ 0.03
NPC1-207ENST00000588867 TRIM7Q9C029 511 aa15.25■□□□□ 0.03
NPC1-207ENST00000588867 GOLPH3Q9H4A6 298 aa15.25■□□□□ 0.03
NPC1-207ENST00000588867 DNAI1Q9UI46 699 aa15.25■□□□□ 0.03
NPC1-207ENST00000588867 GRID2IPA4D2P6 1211 aa15.24■□□□□ 0.03
NPC1-207ENST00000588867 H3BNC9 293 aa15.24■□□□□ 0.03
NPC1-207ENST00000588867 MYO1FO00160 1098 aa15.24■□□□□ 0.03
NPC1-207ENST00000588867 BUB1BO60566 1050 aaPredicted RBP15.24■□□□□ 0.03
NPC1-207ENST00000588867 SEC24AO95486 1093 aa15.24■□□□□ 0.03
NPC1-207ENST00000588867 USP17L7P0C7H9 530 aa15.24■□□□□ 0.03
NPC1-207ENST00000588867 SPATA31D3P0C874 917 aa15.24■□□□□ 0.03
NPC1-207ENST00000588867 KLRC2P26717 231 aa15.24■□□□□ 0.03
NPC1-207ENST00000588867 RFC1P35251 1148 aaPredicted RBP15.24■□□□□ 0.03
NPC1-207ENST00000588867 TUFMP49411 452 aaKnown RBP15.24■□□□□ 0.03
NPC1-207ENST00000588867 GSCP56915 257 aaPredicted RBP15.24■□□□□ 0.03
NPC1-207ENST00000588867 TAF5Q15542 800 aa15.24■□□□□ 0.03
NPC1-207ENST00000588867 PTPROQ16827 1216 aa15.24■□□□□ 0.03
NPC1-207ENST00000588867 RAB41Q5JT25 222 aa15.24■□□□□ 0.03
NPC1-207ENST00000588867 OLFML1Q6UWY5 402 aa15.24■□□□□ 0.03
NPC1-207ENST00000588867 SPATA31D4Q6ZUB0 917 aa15.24■□□□□ 0.03
NPC1-207ENST00000588867 KLHL5Q96PQ7 755 aa15.24■□□□□ 0.03
NPC1-207ENST00000588867 PNPLA8Q9NP80 782 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms