RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 CENPFP49454 3210 aa9.2□□□□□ -0.94
SMAD4-206ENST00000588860 CASTOR2A6NHX0 329 aa9.2□□□□□ -0.94
SMAD4-206ENST00000588860 KBTBD13C9JR72 458 aa9.2□□□□□ -0.94
SMAD4-206ENST00000588860 LRCH4O75427 683 aa9.2□□□□□ -0.94
SMAD4-206ENST00000588860 GRAP2O75791 330 aa9.2□□□□□ -0.94
SMAD4-206ENST00000588860 RNF8O76064 485 aa9.2□□□□□ -0.94
SMAD4-206ENST00000588860 CKBP12277 381 aa9.2□□□□□ -0.94
SMAD4-206ENST00000588860 SKIP12755 728 aa9.2□□□□□ -0.94
SMAD4-206ENST00000588860 KRT10P13645 584 aa9.2□□□□□ -0.94
SMAD4-206ENST00000588860 ACAT1P24752 427 aaKnown RBP9.2□□□□□ -0.94
SMAD4-206ENST00000588860 TKTP29401 623 aaKnown RBP9.2□□□□□ -0.94
SMAD4-206ENST00000588860 GRK4P32298 578 aa9.2□□□□□ -0.94
SMAD4-206ENST00000588860 RPL9P32969 192 aaKnown RBP9.2□□□□□ -0.94
SMAD4-206ENST00000588860 HSPA9P38646 679 aaKnown RBP9.2□□□□□ -0.94
SMAD4-206ENST00000588860 RPL21P46778 160 aaKnown RBP9.2□□□□□ -0.94
SMAD4-206ENST00000588860 CLCNKBP51801 687 aa9.2□□□□□ -0.94
SMAD4-206ENST00000588860 AFF1P51825 1210 aaKnown RBP9.2□□□□□ -0.94
SMAD4-206ENST00000588860 PRMT2P55345 433 aa9.2□□□□□ -0.94
SMAD4-206ENST00000588860 COPS2P61201 443 aa9.2□□□□□ -0.94
SMAD4-206ENST00000588860 SLC6A3Q01959 620 aa9.2□□□□□ -0.94
SMAD4-206ENST00000588860 SLC25A11Q02978 314 aaKnown RBP9.2□□□□□ -0.94
SMAD4-206ENST00000588860 KRT17Q04695 432 aa9.2□□□□□ -0.94
SMAD4-206ENST00000588860 KLF1Q13351 362 aaPredicted RBP9.2□□□□□ -0.94
SMAD4-206ENST00000588860 PPP1R7Q15435 360 aa9.2□□□□□ -0.94
SMAD4-206ENST00000588860 SMTNL2Q2TAL5 461 aa9.2□□□□□ -0.94
SMAD4-206ENST00000588860 ALS2CLQ60I27 953 aa9.2□□□□□ -0.94
SMAD4-206ENST00000588860 WSCD1Q658N2 575 aa9.2□□□□□ -0.94
SMAD4-206ENST00000588860 OLFML1Q6UWY5 402 aa9.2□□□□□ -0.94
SMAD4-206ENST00000588860 MFSD7Q6UXD7 560 aa9.2□□□□□ -0.94
SMAD4-206ENST00000588860 POLNQ7Z5Q5 900 aa9.2□□□□□ -0.94
SMAD4-206ENST00000588860 ANKS1BQ7Z6G8 1248 aa9.2□□□□□ -0.94
SMAD4-206ENST00000588860 MREGQ8N565 214 aa9.2□□□□□ -0.94
SMAD4-206ENST00000588860 ANKRD52Q8NB46 1076 aa9.2□□□□□ -0.94
SMAD4-206ENST00000588860 B3GALNT2Q8NCR0 500 aa9.2□□□□□ -0.94
SMAD4-206ENST00000588860 GSTCDQ8NEC7 633 aa9.2□□□□□ -0.94
SMAD4-206ENST00000588860 FAM71BQ8TC56 605 aa9.2□□□□□ -0.94
SMAD4-206ENST00000588860 SLC2A14Q8TDB8 520 aa9.2□□□□□ -0.94
SMAD4-206ENST00000588860 GRK7Q8WTQ7 553 aa9.2□□□□□ -0.94
SMAD4-206ENST00000588860 STK32AQ8WU08 396 aa9.2□□□□□ -0.94
SMAD4-206ENST00000588860 RXFP2Q8WXD0 754 aa9.2□□□□□ -0.94
SMAD4-206ENST00000588860 RAPGEF5Q92565 580 aa9.2□□□□□ -0.94
SMAD4-206ENST00000588860 SENP8Q96LD8 212 aa9.2□□□□□ -0.94
SMAD4-206ENST00000588860 CCDC114Q96M63 670 aa9.2□□□□□ -0.94
SMAD4-206ENST00000588860 RUFY1Q96T51 708 aa9.2□□□□□ -0.94
SMAD4-206ENST00000588860 CNPY3Q9BT09 278 aa9.2□□□□□ -0.94
SMAD4-206ENST00000588860 MED10Q9BTT4 135 aa9.2□□□□□ -0.94
SMAD4-206ENST00000588860 MED4Q9NPJ6 270 aa9.2□□□□□ -0.94
SMAD4-206ENST00000588860 STARD7Q9NQZ5 370 aa9.2□□□□□ -0.94
SMAD4-206ENST00000588860 HOMER3Q9NSC5 361 aa9.2□□□□□ -0.94
SMAD4-206ENST00000588860 ASNSD1Q9NWL6 643 aa9.2□□□□□ -0.94
SMAD4-206ENST00000588860 PCSK1NQ9UHG2 260 aa9.2□□□□□ -0.94
SMAD4-206ENST00000588860 INPP5FQ9Y2H2 1132 aa9.2□□□□□ -0.94
SMAD4-206ENST00000588860 PTCH2Q9Y6C5 1203 aa9.2□□□□□ -0.94
SMAD4-206ENST00000588860 VWA8A3KMH1 1905 aa9.2□□□□□ -0.94
SMAD4-206ENST00000588860 FNDC1Q4ZHG4 1894 aaPredicted RBP9.19□□□□□ -0.94
SMAD4-206ENST00000588860 MICAL3Q7RTP6 2002 aa9.19□□□□□ -0.94
SMAD4-206ENST00000588860 HTTP42858 3142 aa9.19□□□□□ -0.94
SMAD4-206ENST00000588860 UNC80Q8N2C7 3258 aa9.19□□□□□ -0.94
SMAD4-206ENST00000588860 hCG_1818297A0A087WSY0 165 aa9.19□□□□□ -0.94
SMAD4-206ENST00000588860 A0A0U1RQF3 1178 aa9.19□□□□□ -0.94
SMAD4-206ENST00000588860 A0A1W2PPC1 479 aa9.19□□□□□ -0.94
SMAD4-206ENST00000588860 C2CD4BA6NLJ0 364 aa9.19□□□□□ -0.94
SMAD4-206ENST00000588860 DPYSL4O14531 572 aa9.19□□□□□ -0.94
SMAD4-206ENST00000588860 ZNF623O75123 536 aa9.19□□□□□ -0.94
SMAD4-206ENST00000588860 ATP2C2O75185 946 aa9.19□□□□□ -0.94
SMAD4-206ENST00000588860 TJP3O95049 919 aa9.19□□□□□ -0.94
SMAD4-206ENST00000588860 TRUB2O95900 331 aaKnown RBP9.19□□□□□ -0.94
SMAD4-206ENST00000588860 POMCP01189 267 aa9.19□□□□□ -0.94
SMAD4-206ENST00000588860 FAM163BP0C2L3 166 aa9.19□□□□□ -0.94
SMAD4-206ENST00000588860 LCP1P13796 627 aa9.19□□□□□ -0.94
SMAD4-206ENST00000588860 PDGFRAP16234 1089 aa9.19□□□□□ -0.94
SMAD4-206ENST00000588860 DESP17661 470 aa9.19□□□□□ -0.94
SMAD4-206ENST00000588860 PTPN1P18031 435 aaKnown RBP9.19□□□□□ -0.94
SMAD4-206ENST00000588860 IGFBP6P24592 240 aaPredicted RBP9.19□□□□□ -0.94
SMAD4-206ENST00000588860 MIPP30301 263 aa9.19□□□□□ -0.94
SMAD4-206ENST00000588860 GBP1P32455 592 aa9.19□□□□□ -0.94
SMAD4-206ENST00000588860 PTPN7P35236 360 aa9.19□□□□□ -0.94
SMAD4-206ENST00000588860 GGCXP38435 758 aa9.19□□□□□ -0.94
SMAD4-206ENST00000588860 CDKN2BP42772 138 aa9.19□□□□□ -0.94
SMAD4-206ENST00000588860 ZNF143P52747 638 aaPredicted RBP9.19□□□□□ -0.94
SMAD4-206ENST00000588860 GRIK3Q13003 919 aa9.19□□□□□ -0.94
SMAD4-206ENST00000588860 PTK6Q13882 451 aa9.19□□□□□ -0.94
SMAD4-206ENST00000588860 ACAP1Q15027 740 aa9.19□□□□□ -0.94
SMAD4-206ENST00000588860 C15orf59Q2T9L4 293 aaPredicted RBP9.19□□□□□ -0.94
SMAD4-206ENST00000588860 TFDP3Q5H9I0 405 aa9.19□□□□□ -0.94
SMAD4-206ENST00000588860 MDH1BQ5I0G3 518 aa9.19□□□□□ -0.94
SMAD4-206ENST00000588860 CFAP58Q5T655 872 aa9.19□□□□□ -0.94
SMAD4-206ENST00000588860 TRNP1Q6NT89 227 aa9.19□□□□□ -0.94
SMAD4-206ENST00000588860 SYDE1Q6ZW31 735 aaPredicted RBP9.19□□□□□ -0.94
SMAD4-206ENST00000588860 TMEM110Q86TL2 294 aa9.19□□□□□ -0.94
SMAD4-206ENST00000588860 ECHDC2Q86YB7 292 aa9.19□□□□□ -0.94
SMAD4-206ENST00000588860 ZDHHC17Q8IUH5 632 aa9.19□□□□□ -0.94
SMAD4-206ENST00000588860 TMEM86AQ8N2M4 240 aa9.19□□□□□ -0.94
SMAD4-206ENST00000588860 ARFGAP1Q8N6T3 406 aa9.19□□□□□ -0.94
SMAD4-206ENST00000588860 SLC35F5Q8WV83 523 aa9.19□□□□□ -0.94
SMAD4-206ENST00000588860 HSPH1Q92598 858 aa9.19□□□□□ -0.94
SMAD4-206ENST00000588860 SLCO2A1Q92959 643 aa9.19□□□□□ -0.94
SMAD4-206ENST00000588860 LRRC45Q96CN5 670 aa9.19□□□□□ -0.94
SMAD4-206ENST00000588860 PIWIL1Q96J94 861 aaKnown RBP9.19□□□□□ -0.94
SMAD4-206ENST00000588860 FAM118BQ9BPY3 351 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms