RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 SPOUT1Q5T280 376 aaKnown RBP27.35■■□□□ 1.97
SCAMP4-210ENST00000588555 RSPO2Q6UXX9 243 aaPredicted RBP27.35■■□□□ 1.97
SCAMP4-210ENST00000588555 GPRIN1Q7Z2K8 1008 aa27.35■■□□□ 1.97
SCAMP4-210ENST00000588555 SPATA2LQ8IUW3 424 aaPredicted RBP27.35■■□□□ 1.97
SCAMP4-210ENST00000588555 RASGEF1CQ8N431 466 aa27.35■■□□□ 1.97
SCAMP4-210ENST00000588555 DMAP1Q9NPF5 467 aaPredicted RBP27.35■■□□□ 1.97
SCAMP4-210ENST00000588555 USTQ9Y2C2 406 aa27.35■■□□□ 1.97
SCAMP4-210ENST00000588555 LAG3P18627 525 aa27.34■■□□□ 1.97
SCAMP4-210ENST00000588555 RNASE9P60153 205 aaKnown RBP27.34■■□□□ 1.97
SCAMP4-210ENST00000588555 NFE2Q16621 373 aaPredicted RBP27.34■■□□□ 1.97
SCAMP4-210ENST00000588555 ANKS3Q6ZW76 656 aa27.34■■□□□ 1.97
SCAMP4-210ENST00000588555 ARCQ7LC44 396 aa27.34■■□□□ 1.97
SCAMP4-210ENST00000588555 ARFGAP1Q8N6T3 406 aa27.34■■□□□ 1.97
SCAMP4-210ENST00000588555 COLGALT1Q8NBJ5 622 aa27.34■■□□□ 1.97
SCAMP4-210ENST00000588555 HTATIP2Q9BUP3 242 aa27.34■■□□□ 1.97
SCAMP4-210ENST00000588555 LRRC4Q9HBW1 653 aa27.34■■□□□ 1.97
SCAMP4-210ENST00000588555 CHST7Q9NS84 486 aa27.34■■□□□ 1.97
SCAMP4-210ENST00000588555 TCF4P15884 667 aa27.33■■□□□ 1.97
SCAMP4-210ENST00000588555 NDUFV1P49821 464 aa27.33■■□□□ 1.97
SCAMP4-210ENST00000588555 ZNF143P52747 638 aaPredicted RBP27.33■■□□□ 1.97
SCAMP4-210ENST00000588555 USP41Q3LFD5 358 aa27.33■■□□□ 1.97
SCAMP4-210ENST00000588555 CC2D1AQ6P1N0 951 aaPredicted RBP27.33■■□□□ 1.97
SCAMP4-210ENST00000588555 ACTRT1Q8TDG2 376 aa27.33■■□□□ 1.97
SCAMP4-210ENST00000588555 RXFP2Q8WXD0 754 aa27.33■■□□□ 1.97
SCAMP4-210ENST00000588555 FUBP3Q96I24 572 aaKnown RBP eCLIP27.33■■□□□ 1.97
SCAMP4-210ENST00000588555 PNPLA8Q9NP80 782 aa27.33■■□□□ 1.97
SCAMP4-210ENST00000588555 CTAGE15A4D2H0 777 aa27.32■■□□□ 1.96
SCAMP4-210ENST00000588555 H7C4K7 107 aa27.32■■□□□ 1.96
SCAMP4-210ENST00000588555 PSTPIP1O43586 416 aa27.32■■□□□ 1.96
SCAMP4-210ENST00000588555 CEP104O60308 925 aa27.32■■□□□ 1.96
SCAMP4-210ENST00000588555 CTAGE8P0CG41 777 aa27.32■■□□□ 1.96
SCAMP4-210ENST00000588555 GPD1P21695 349 aa27.32■■□□□ 1.96
SCAMP4-210ENST00000588555 TKTL1P51854 596 aa27.32■■□□□ 1.96
SCAMP4-210ENST00000588555 CCDC181Q5TID7 509 aa27.32■■□□□ 1.96
SCAMP4-210ENST00000588555 CTAGE6Q86UF2 777 aa27.32■■□□□ 1.96
SCAMP4-210ENST00000588555 CTAGE4Q8IX94 777 aa27.32■■□□□ 1.96
SCAMP4-210ENST00000588555 HERVK_113Q902F9 699 aa27.32■■□□□ 1.96
SCAMP4-210ENST00000588555 OXCT2Q9BYC2 517 aaPredicted RBP27.32■■□□□ 1.96
SCAMP4-210ENST00000588555 UQCRHLA0A096LP55 91 aa27.32■■□□□ 1.96
SCAMP4-210ENST00000588555 EFCAB8A8MWE9 144 aa27.32■■□□□ 1.96
SCAMP4-210ENST00000588555 DPYSL4O14531 572 aa27.32■■□□□ 1.96
SCAMP4-210ENST00000588555 LRCH4O75427 683 aa27.32■■□□□ 1.96
SCAMP4-210ENST00000588555 UQCRHP07919 91 aa27.32■■□□□ 1.96
SCAMP4-210ENST00000588555 LINC00271P0C7V0 271 aa27.32■■□□□ 1.96
SCAMP4-210ENST00000588555 PDGFRAP16234 1089 aa27.32■■□□□ 1.96
SCAMP4-210ENST00000588555 CYP2F1P24903 491 aa27.32■■□□□ 1.96
SCAMP4-210ENST00000588555 MRPS5P82675 430 aaKnown RBP27.32■■□□□ 1.96
SCAMP4-210ENST00000588555 PRSS55Q6UWB4 352 aaPredicted RBP27.32■■□□□ 1.96
SCAMP4-210ENST00000588555 RHOT1Q8IXI2 618 aa27.32■■□□□ 1.96
SCAMP4-210ENST00000588555 SIX6OS1Q8N1H7 587 aa27.32■■□□□ 1.96
SCAMP4-210ENST00000588555 CNPY3Q9BT09 278 aa27.32■■□□□ 1.96
SCAMP4-210ENST00000588555 TTC7AQ9ULT0 858 aaPredicted RBP27.32■■□□□ 1.96
SCAMP4-210ENST00000588555 ZMYND8Q9ULU4 1186 aaPredicted RBP27.32■■□□□ 1.96
SCAMP4-210ENST00000588555 CARNS1A5YM72 827 aa27.31■■□□□ 1.96
SCAMP4-210ENST00000588555 PAFAH1B1P43034 410 aa27.31■■□□□ 1.96
SCAMP4-210ENST00000588555 RWDD2BP57060 319 aa27.31■■□□□ 1.96
SCAMP4-210ENST00000588555 ZNF211Q13398 564 aaPredicted RBP27.31■■□□□ 1.96
SCAMP4-210ENST00000588555 ACAP1Q15027 740 aa27.31■■□□□ 1.96
SCAMP4-210ENST00000588555 RSRC2Q7L4I2 434 aaKnown RBP27.31■■□□□ 1.96
SCAMP4-210ENST00000588555 PIK3R5Q8WYR1 880 aa27.31■■□□□ 1.96
SCAMP4-210ENST00000588555 RNPC3Q96LT9 517 aaKnown RBP27.31■■□□□ 1.96
SCAMP4-210ENST00000588555 ULBP1Q9BZM6 244 aa27.31■■□□□ 1.96
SCAMP4-210ENST00000588555 ABI2Q9NYB9 513 aaPredicted RBP27.31■■□□□ 1.96
SCAMP4-210ENST00000588555 FBXO21O94952 628 aa27.3■■□□□ 1.96
SCAMP4-210ENST00000588555 SOD2P04179 222 aa27.3■■□□□ 1.96
SCAMP4-210ENST00000588555 PYGMP11217 842 aa27.3■■□□□ 1.96
SCAMP4-210ENST00000588555 ITIH3Q06033 890 aa27.3■■□□□ 1.96
SCAMP4-210ENST00000588555 GPR17Q13304 367 aa27.3■■□□□ 1.96
SCAMP4-210ENST00000588555 EFHC1Q5JVL4 640 aa27.3■■□□□ 1.96
SCAMP4-210ENST00000588555 LRRC38Q5VT99 294 aa27.3■■□□□ 1.96
SCAMP4-210ENST00000588555 NDRG1Q92597 394 aaKnown RBP27.3■■□□□ 1.96
SCAMP4-210ENST00000588555 TMEM169Q96HH4 297 aa27.3■■□□□ 1.96
SCAMP4-210ENST00000588555 RPGRIP1Q96KN7 1286 aa27.3■■□□□ 1.96
SCAMP4-210ENST00000588555 CNGB3Q9NQW8 809 aa27.3■■□□□ 1.96
SCAMP4-210ENST00000588555 SPG21Q9NZD8 308 aa27.3■■□□□ 1.96
SCAMP4-210ENST00000588555 MTRRQ9UBK8 725 aa27.3■■□□□ 1.96
SCAMP4-210ENST00000588555 DAOAP59103 153 aa27.3■■□□□ 1.96
SCAMP4-210ENST00000588555 CCDC14Q49A88 953 aa27.3■■□□□ 1.96
SCAMP4-210ENST00000588555 AADACL2Q6P093 401 aa27.3■■□□□ 1.96
SCAMP4-210ENST00000588555 SBDSQ9Y3A5 250 aaKnown RBP eCLIP27.3■■□□□ 1.96
SCAMP4-210ENST00000588555 PCDHB5Q9Y5E4 795 aa27.3■■□□□ 1.96
SCAMP4-210ENST00000588555 PGRMC1O00264 195 aaKnown RBP27.29■■□□□ 1.96
SCAMP4-210ENST00000588555 SLC25A11Q02978 314 aaKnown RBP27.29■■□□□ 1.96
SCAMP4-210ENST00000588555 VSTM1Q6UX27 236 aa27.29■■□□□ 1.96
SCAMP4-210ENST00000588555 SPATA4Q8NEY3 305 aa27.29■■□□□ 1.96
SCAMP4-210ENST00000588555 RIN2Q8WYP3 895 aaPredicted RBP27.29■■□□□ 1.96
SCAMP4-210ENST00000588555 CFAP57Q96MR6 1250 aa27.29■■□□□ 1.96
SCAMP4-210ENST00000588555 C11orf84Q9BUA3 381 aaPredicted RBP27.29■■□□□ 1.96
SCAMP4-210ENST00000588555 ASNSD1Q9NWL6 643 aa27.29■■□□□ 1.96
SCAMP4-210ENST00000588555 INSL6Q9Y581 213 aa27.29■■□□□ 1.96
SCAMP4-210ENST00000588555 BACE2Q9Y5Z0 518 aa27.29■■□□□ 1.96
SCAMP4-210ENST00000588555 TNFRSF10BO14763 440 aa27.28■■□□□ 1.96
SCAMP4-210ENST00000588555 HSF2BPO75031 334 aa27.28■■□□□ 1.96
SCAMP4-210ENST00000588555 VNN2O95498 520 aa27.28■■□□□ 1.96
SCAMP4-210ENST00000588555 CPB1P15086 417 aa27.28■■□□□ 1.96
SCAMP4-210ENST00000588555 MAGEA11P43364 429 aa27.28■■□□□ 1.96
SCAMP4-210ENST00000588555 NAA30Q147X3 362 aaPredicted RBP27.28■■□□□ 1.96
SCAMP4-210ENST00000588555 C15orf59Q2T9L4 293 aaPredicted RBP27.28■■□□□ 1.96
SCAMP4-210ENST00000588555 SH3PXD2AQ5TCZ1 1133 aa27.28■■□□□ 1.96
SCAMP4-210ENST00000588555 SLC8B1Q6J4K2 584 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms