RNA–Protein interactions for RNA: ENST00000588554.1

GPATCH8-206, Transcript of G-patch domain containing 8, humanhuman

TSL 2

Gene GPATCH8, Length 565 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-206ENST00000588554 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.08□□□□□ -1.12
GPATCH8-206ENST00000588554 C2orf78A6NCI8 922 aa8.08□□□□□ -1.12
GPATCH8-206ENST00000588554 GABRDO14764 452 aa8.08□□□□□ -1.12
GPATCH8-206ENST00000588554 SCAMP3O14828 347 aaKnown RBP8.08□□□□□ -1.12
GPATCH8-206ENST00000588554 CLIC2O15247 247 aa8.08□□□□□ -1.12
GPATCH8-206ENST00000588554 STX6O43752 255 aa8.08□□□□□ -1.12
GPATCH8-206ENST00000588554 EGFP01133 1207 aa8.08□□□□□ -1.12
GPATCH8-206ENST00000588554 GARTP22102 1010 aa8.08□□□□□ -1.12
GPATCH8-206ENST00000588554 PAX3P23760 479 aa8.08□□□□□ -1.12
GPATCH8-206ENST00000588554 WEE1P30291 646 aa8.08□□□□□ -1.12
GPATCH8-206ENST00000588554 ABCD1P33897 745 aa8.08□□□□□ -1.12
GPATCH8-206ENST00000588554 SOX11P35716 441 aa8.08□□□□□ -1.12
GPATCH8-206ENST00000588554 TXLNAP40222 546 aa8.08□□□□□ -1.12
GPATCH8-206ENST00000588554 NASPP49321 788 aaPredicted RBP8.08□□□□□ -1.12
GPATCH8-206ENST00000588554 NRLP54845 237 aa8.08□□□□□ -1.12
GPATCH8-206ENST00000588554 RBP5P82980 135 aa8.08□□□□□ -1.12
GPATCH8-206ENST00000588554 ZXDBP98169 803 aa8.08□□□□□ -1.12
GPATCH8-206ENST00000588554 RUNX3Q13761 415 aa8.08□□□□□ -1.12
GPATCH8-206ENST00000588554 LRRC32Q14392 662 aa8.08□□□□□ -1.12
GPATCH8-206ENST00000588554 STK38Q15208 465 aa8.08□□□□□ -1.12
GPATCH8-206ENST00000588554 DGKKQ5KSL6 1271 aa8.08□□□□□ -1.12
GPATCH8-206ENST00000588554 SHC4Q6S5L8 630 aa8.08□□□□□ -1.12
GPATCH8-206ENST00000588554 CCDC73Q6ZRK6 1079 aa8.08□□□□□ -1.12
GPATCH8-206ENST00000588554 MON1AQ86VX9 555 aa8.08□□□□□ -1.12
GPATCH8-206ENST00000588554 LONP2Q86WA8 852 aa8.08□□□□□ -1.12
GPATCH8-206ENST00000588554 NT5DC4Q86YG4 428 aa8.08□□□□□ -1.12
GPATCH8-206ENST00000588554 GPD1LQ8N335 351 aa8.08□□□□□ -1.12
GPATCH8-206ENST00000588554 ARL14EPQ8N8R7 260 aaPredicted RBP8.08□□□□□ -1.12
GPATCH8-206ENST00000588554 LINC00301Q8NCQ3 95 aa8.08□□□□□ -1.12
GPATCH8-206ENST00000588554 C2orf15Q8WU43 125 aaKnown RBP8.08□□□□□ -1.12
GPATCH8-206ENST00000588554 CACTINQ8WUQ7 758 aaKnown RBP8.08□□□□□ -1.12
GPATCH8-206ENST00000588554 KBTBD7Q8WVZ9 684 aa8.08□□□□□ -1.12
GPATCH8-206ENST00000588554 DHX58Q96C10 678 aa8.08□□□□□ -1.12
GPATCH8-206ENST00000588554 HPDLQ96IR7 371 aa8.08□□□□□ -1.12
GPATCH8-206ENST00000588554 ZNF560Q96MR9 790 aa8.08□□□□□ -1.12
GPATCH8-206ENST00000588554 GCNAQ96QF7 691 aa8.08□□□□□ -1.12
GPATCH8-206ENST00000588554 FAM126AQ9BYI3 521 aaPredicted RBP8.08□□□□□ -1.12
GPATCH8-206ENST00000588554 GRIP2Q9C0E4 1043 aa8.08□□□□□ -1.12
GPATCH8-206ENST00000588554 BLZF1Q9H2G9 400 aa8.08□□□□□ -1.12
GPATCH8-206ENST00000588554 INTS13Q9NVM9 706 aa8.08□□□□□ -1.12
GPATCH8-206ENST00000588554 THG1LQ9NWX6 298 aaKnown RBP8.08□□□□□ -1.12
GPATCH8-206ENST00000588554 GDAP2Q9NXN4 497 aa8.08□□□□□ -1.12
GPATCH8-206ENST00000588554 OBP2AQ9NY56 170 aa8.08□□□□□ -1.12
GPATCH8-206ENST00000588554 ITGA11Q9UKX5 1188 aa8.08□□□□□ -1.12
GPATCH8-206ENST00000588554 WNT6Q9Y6F9 365 aa8.08□□□□□ -1.12
GPATCH8-206ENST00000588554 F5P12259 2224 aa8.07□□□□□ -1.12
GPATCH8-206ENST00000588554 TCHHQ07283 1943 aa8.07□□□□□ -1.12
GPATCH8-206ENST00000588554 SPTLC2O15270 562 aa8.07□□□□□ -1.12
GPATCH8-206ENST00000588554 TGFB1I1O43294 461 aa8.07□□□□□ -1.12
GPATCH8-206ENST00000588554 NOL4O94818 638 aa8.07□□□□□ -1.12
GPATCH8-206ENST00000588554 LDHAP00338 332 aaKnown RBP8.07□□□□□ -1.12
GPATCH8-206ENST00000588554 TMEM191BP0C7N4 346 aa8.07□□□□□ -1.12
GPATCH8-206ENST00000588554 BDNFP23560 247 aa8.07□□□□□ -1.12
GPATCH8-206ENST00000588554 PNPLA4P41247 253 aa8.07□□□□□ -1.12
GPATCH8-206ENST00000588554 CACNA2D1P54289 1103 aa8.07□□□□□ -1.12
GPATCH8-206ENST00000588554 MYL7Q01449 175 aa8.07□□□□□ -1.12
GPATCH8-206ENST00000588554 TSPY1Q01534 308 aa8.07□□□□□ -1.12
GPATCH8-206ENST00000588554 POU5F1Q01860 360 aaKnown RBP8.07□□□□□ -1.12
GPATCH8-206ENST00000588554 SMARCB1Q12824 385 aa8.07□□□□□ -1.12
GPATCH8-206ENST00000588554 POU4F2Q12837 409 aa8.07□□□□□ -1.12
GPATCH8-206ENST00000588554 NFE2Q16621 373 aaPredicted RBP8.07□□□□□ -1.12
GPATCH8-206ENST00000588554 TMEM196Q5HYL7 178 aa8.07□□□□□ -1.12
GPATCH8-206ENST00000588554 LAIR1Q6GTX8 287 aa8.07□□□□□ -1.12
GPATCH8-206ENST00000588554 FAM171BQ6P995 826 aa8.07□□□□□ -1.12
GPATCH8-206ENST00000588554 LIMS2Q7Z4I7 341 aa8.07□□□□□ -1.12
GPATCH8-206ENST00000588554 SPATA2LQ8IUW3 424 aaPredicted RBP8.07□□□□□ -1.12
GPATCH8-206ENST00000588554 NELFCDQ8IXH7 590 aa8.07□□□□□ -1.12
GPATCH8-206ENST00000588554 GRAMD1CQ8IYS0 662 aa8.07□□□□□ -1.12
GPATCH8-206ENST00000588554 ADGRF2Q8IZF7 708 aa8.07□□□□□ -1.12
GPATCH8-206ENST00000588554 TOP6BLQ8N6T0 577 aa8.07□□□□□ -1.12
GPATCH8-206ENST00000588554 LRRC52Q8N7C0 313 aa8.07□□□□□ -1.12
GPATCH8-206ENST00000588554 MRPS31Q92665 395 aaKnown RBP8.07□□□□□ -1.12
GPATCH8-206ENST00000588554 CCDC127Q96BQ5 260 aa8.07□□□□□ -1.12
GPATCH8-206ENST00000588554 CHAMP1Q96JM3 812 aa8.07□□□□□ -1.12
GPATCH8-206ENST00000588554 MRPL45Q9BRJ2 306 aaKnown RBP8.07□□□□□ -1.12
GPATCH8-206ENST00000588554 TRIM9Q9C026 710 aa8.07□□□□□ -1.12
GPATCH8-206ENST00000588554 RNF38Q9H0F5 515 aa8.07□□□□□ -1.12
GPATCH8-206ENST00000588554 GZF1Q9H116 711 aaPredicted RBP8.07□□□□□ -1.12
GPATCH8-206ENST00000588554 SMOC1Q9H4F8 434 aa8.07□□□□□ -1.12
GPATCH8-206ENST00000588554 TMEM206Q9H813 350 aa8.07□□□□□ -1.12
GPATCH8-206ENST00000588554 RAB6BQ9NRW1 208 aa8.07□□□□□ -1.12
GPATCH8-206ENST00000588554 RXFP3Q9NSD7 469 aa8.07□□□□□ -1.12
GPATCH8-206ENST00000588554 SEMA4GQ9NTN9 838 aa8.07□□□□□ -1.12
GPATCH8-206ENST00000588554 TMEM30AQ9NV96 361 aa8.07□□□□□ -1.12
GPATCH8-206ENST00000588554 KBTBD4Q9NVX7 518 aa8.07□□□□□ -1.12
GPATCH8-206ENST00000588554 HSPBP1Q9NZL4 362 aa8.07□□□□□ -1.12
GPATCH8-206ENST00000588554 GCNT4Q9P109 453 aa8.07□□□□□ -1.12
GPATCH8-206ENST00000588554 GMEB2Q9UKD1 530 aa8.07□□□□□ -1.12
GPATCH8-206ENST00000588554 RAB23Q9ULC3 237 aa8.07□□□□□ -1.12
GPATCH8-206ENST00000588554 INVSQ9Y283 1065 aa8.07□□□□□ -1.12
GPATCH8-206ENST00000588554 NUP210Q8TEM1 1887 aaPredicted RBP8.06□□□□□ -1.12
GPATCH8-206ENST00000588554 ZNF233A6NK53 670 aa8.06□□□□□ -1.12
GPATCH8-206ENST00000588554 K7ELQ4 463 aaPredicted RBP8.06□□□□□ -1.12
GPATCH8-206ENST00000588554 TRDMT1O14717 391 aaKnown RBP8.06□□□□□ -1.12
GPATCH8-206ENST00000588554 DCLK1O15075 740 aa8.06□□□□□ -1.12
GPATCH8-206ENST00000588554 TNNC2P02585 160 aa8.06□□□□□ -1.12
GPATCH8-206ENST00000588554 RETP07949 1114 aa8.06□□□□□ -1.12
GPATCH8-206ENST00000588554 CSH1P0DML2 217 aa8.06□□□□□ -1.12
GPATCH8-206ENST00000588554 CSH2P0DML3 217 aa8.06□□□□□ -1.12
GPATCH8-206ENST00000588554 DLATP10515 647 aaKnown RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms