RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 USP3Q9Y6I4 520 aa9.57□□□□□ -0.88
CIRBP-218ENST00000588344 PRRC2BQ5JSZ5 2229 aaKnown RBP9.56□□□□□ -0.88
CIRBP-218ENST00000588344 COL4A4P53420 1690 aaPredicted RBP9.56□□□□□ -0.88
CIRBP-218ENST00000588344 GOLGA6L3A6NEY3 463 aa9.56□□□□□ -0.88
CIRBP-218ENST00000588344 LRRC53A6NM62 1247 aa9.56□□□□□ -0.88
CIRBP-218ENST00000588344 HHLA1C9JL84 531 aa9.56□□□□□ -0.88
CIRBP-218ENST00000588344 BEST1O76090 585 aa9.56□□□□□ -0.88
CIRBP-218ENST00000588344 FBXO21O94952 628 aa9.56□□□□□ -0.88
CIRBP-218ENST00000588344 F11P03951 625 aa9.56□□□□□ -0.88
CIRBP-218ENST00000588344 GABRR2P28476 465 aa9.56□□□□□ -0.88
CIRBP-218ENST00000588344 WEE1P30291 646 aa9.56□□□□□ -0.88
CIRBP-218ENST00000588344 HOXD11P31277 338 aaPredicted RBP9.56□□□□□ -0.88
CIRBP-218ENST00000588344 HNRNPH3P31942 346 aaKnown RBP9.56□□□□□ -0.88
CIRBP-218ENST00000588344 PRKCIP41743 596 aa9.56□□□□□ -0.88
CIRBP-218ENST00000588344 RPL34P49207 117 aaKnown RBP9.56□□□□□ -0.88
CIRBP-218ENST00000588344 ZNF75DP51815 510 aa9.56□□□□□ -0.88
CIRBP-218ENST00000588344 SLC5A3P53794 718 aa9.56□□□□□ -0.88
CIRBP-218ENST00000588344 CACNA2D1P54289 1103 aa9.56□□□□□ -0.88
CIRBP-218ENST00000588344 CLUL1Q15846 466 aa9.56□□□□□ -0.88
CIRBP-218ENST00000588344 ASIC2Q16515 512 aa9.56□□□□□ -0.88
CIRBP-218ENST00000588344 CCDC142Q17RM4 750 aa9.56□□□□□ -0.88
CIRBP-218ENST00000588344 SNX30Q5VWJ9 437 aa9.56□□□□□ -0.88
CIRBP-218ENST00000588344 PM20D1Q6GTS8 502 aa9.56□□□□□ -0.88
CIRBP-218ENST00000588344 TMEM110Q86TL2 294 aa9.56□□□□□ -0.88
CIRBP-218ENST00000588344 VPS36Q86VN1 386 aa9.56□□□□□ -0.88
CIRBP-218ENST00000588344 TMC8Q8IU68 726 aa9.56□□□□□ -0.88
CIRBP-218ENST00000588344 ZDHHC17Q8IUH5 632 aa9.56□□□□□ -0.88
CIRBP-218ENST00000588344 SIX6OS1Q8N1H7 587 aa9.56□□□□□ -0.88
CIRBP-218ENST00000588344 ZNF276Q8N554 614 aa9.56□□□□□ -0.88
CIRBP-218ENST00000588344 ZMIZ2Q8NF64 920 aa9.56□□□□□ -0.88
CIRBP-218ENST00000588344 UBA3Q8TBC4 463 aa9.56□□□□□ -0.88
CIRBP-218ENST00000588344 GPR152Q8TDT2 470 aa9.56□□□□□ -0.88
CIRBP-218ENST00000588344 CPLX3Q8WVH0 158 aa9.56□□□□□ -0.88
CIRBP-218ENST00000588344 IRGQQ8WZA9 623 aa9.56□□□□□ -0.88
CIRBP-218ENST00000588344 DDX1Q92499 740 aaKnown RBP9.56□□□□□ -0.88
CIRBP-218ENST00000588344 SECISBP2LQ93073 1101 aaKnown RBP9.56□□□□□ -0.88
CIRBP-218ENST00000588344 E2F7Q96AV8 911 aa9.56□□□□□ -0.88
CIRBP-218ENST00000588344 CDK5RAP1Q96SZ6 601 aaKnown RBP9.56□□□□□ -0.88
CIRBP-218ENST00000588344 APOL5Q9BWW9 433 aa9.56□□□□□ -0.88
CIRBP-218ENST00000588344 LRRC3Q9BY71 257 aa9.56□□□□□ -0.88
CIRBP-218ENST00000588344 ATXN3LQ9H3M9 355 aa9.56□□□□□ -0.88
CIRBP-218ENST00000588344 TASP1Q9H6P5 420 aa9.56□□□□□ -0.88
CIRBP-218ENST00000588344 CNGB3Q9NQW8 809 aa9.56□□□□□ -0.88
CIRBP-218ENST00000588344 TLR8Q9NR97 1041 aaKnown RBP9.56□□□□□ -0.88
CIRBP-218ENST00000588344 TMEM51Q9NW97 253 aa9.56□□□□□ -0.88
CIRBP-218ENST00000588344 CDH7Q9ULB5 785 aa9.56□□□□□ -0.88
CIRBP-218ENST00000588344 MAGED2Q9UNF1 606 aaPredicted RBP9.56□□□□□ -0.88
CIRBP-218ENST00000588344 GOLGA6L6A8MZA4 724 aa9.55□□□□□ -0.88
CIRBP-218ENST00000588344 AKR1B15C9JRZ8 316 aaPredicted RBP9.55□□□□□ -0.88
CIRBP-218ENST00000588344 ZBED1O96006 694 aa9.55□□□□□ -0.88
CIRBP-218ENST00000588344 GYPCP04921 128 aa9.55□□□□□ -0.88
CIRBP-218ENST00000588344 SERPING1P05155 500 aa9.55□□□□□ -0.88
CIRBP-218ENST00000588344 PNMA6AP0CW24 399 aaPredicted RBP9.55□□□□□ -0.88
CIRBP-218ENST00000588344 MYL4P12829 197 aa9.55□□□□□ -0.88
CIRBP-218ENST00000588344 TNFAIP3P21580 790 aa9.55□□□□□ -0.88
CIRBP-218ENST00000588344 CDC25BP30305 580 aa9.55□□□□□ -0.88
CIRBP-218ENST00000588344 CASP14P31944 242 aa9.55□□□□□ -0.88
CIRBP-218ENST00000588344 CDH5P33151 784 aaPredicted RBP9.55□□□□□ -0.88
CIRBP-218ENST00000588344 GPR15P49685 360 aa9.55□□□□□ -0.88
CIRBP-218ENST00000588344 TUBP50607 506 aa9.55□□□□□ -0.88
CIRBP-218ENST00000588344 TFF2Q03403 129 aa9.55□□□□□ -0.88
CIRBP-218ENST00000588344 ARID5AQ03989 594 aa9.55□□□□□ -0.88
CIRBP-218ENST00000588344 KLHL30Q0D2K2 578 aa9.55□□□□□ -0.88
CIRBP-218ENST00000588344 TAF10Q12962 218 aa9.55□□□□□ -0.88
CIRBP-218ENST00000588344 ARID5BQ14865 1188 aa9.55□□□□□ -0.88
CIRBP-218ENST00000588344 PRSS36Q5K4E3 855 aa9.55□□□□□ -0.88
CIRBP-218ENST00000588344 SDHAF4Q5VUM1 108 aa9.55□□□□□ -0.88
CIRBP-218ENST00000588344 CCDC186Q7Z3E2 898 aa9.55□□□□□ -0.88
CIRBP-218ENST00000588344 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.55□□□□□ -0.88
CIRBP-218ENST00000588344 NOP9Q86U38 636 aaKnown RBP9.55□□□□□ -0.88
CIRBP-218ENST00000588344 ADHFE1Q8IWW8 467 aa9.55□□□□□ -0.88
CIRBP-218ENST00000588344 ZDHHC14Q8IZN3 488 aa9.55□□□□□ -0.88
CIRBP-218ENST00000588344 HS6ST3Q8IZP7 471 aa9.55□□□□□ -0.88
CIRBP-218ENST00000588344 ANP32BQ92688 251 aaKnown RBP9.55□□□□□ -0.88
CIRBP-218ENST00000588344 GOLGA1Q92805 767 aa9.55□□□□□ -0.88
CIRBP-218ENST00000588344 FBXO32Q969P5 355 aa9.55□□□□□ -0.88
CIRBP-218ENST00000588344 PPP1R13BQ96KQ4 1090 aa9.55□□□□□ -0.88
CIRBP-218ENST00000588344 AGPAT1Q99943 283 aa9.55□□□□□ -0.88
CIRBP-218ENST00000588344 ZSWIM1Q9BR11 485 aa9.55□□□□□ -0.88
CIRBP-218ENST00000588344 SLC4A5Q9BY07 1137 aa9.55□□□□□ -0.88
CIRBP-218ENST00000588344 POMKQ9H5K3 350 aa9.55□□□□□ -0.88
CIRBP-218ENST00000588344 TMEM30AQ9NV96 361 aa9.55□□□□□ -0.88
CIRBP-218ENST00000588344 HCFC1R1Q9NWW0 138 aa9.55□□□□□ -0.88
CIRBP-218ENST00000588344 CLIC5Q9NZA1 410 aa9.55□□□□□ -0.88
CIRBP-218ENST00000588344 IMPACTQ9P2X3 320 aa9.55□□□□□ -0.88
CIRBP-218ENST00000588344 EPS15L1Q9UBC2 864 aa9.55□□□□□ -0.88
CIRBP-218ENST00000588344 NOCTQ9UK39 431 aaKnown RBP9.55□□□□□ -0.88
CIRBP-218ENST00000588344 VWA8A3KMH1 1905 aa9.54□□□□□ -0.88
CIRBP-218ENST00000588344 SPTBN5Q9NRC6 3674 aaKnown RBP9.54□□□□□ -0.88
CIRBP-218ENST00000588344 A0A1W2PRU2 124 aa9.54□□□□□ -0.88
CIRBP-218ENST00000588344 ZNF840PA6NDX5 716 aa9.54□□□□□ -0.88
CIRBP-218ENST00000588344 GLI1P08151 1106 aa9.54□□□□□ -0.88
CIRBP-218ENST00000588344 MMEP08473 750 aa9.54□□□□□ -0.88
CIRBP-218ENST00000588344 ZDHHC11BP0C7U3 371 aa9.54□□□□□ -0.88
CIRBP-218ENST00000588344 RALAP11233 206 aa9.54□□□□□ -0.88
CIRBP-218ENST00000588344 GZMAP12544 262 aa9.54□□□□□ -0.88
CIRBP-218ENST00000588344 BMP1P13497 986 aa9.54□□□□□ -0.88
CIRBP-218ENST00000588344 TKTL1P51854 596 aa9.54□□□□□ -0.88
CIRBP-218ENST00000588344 CDR1P51861 262 aa9.54□□□□□ -0.88
CIRBP-218ENST00000588344 NTHL1P78549 312 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms