RNA–Protein interactions for RNA: ENST00000588269.1

PRKCSH-207, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-207ENST00000588269 NACA2Q9H009 215 aa12.43□□□□□ -0.42
PRKCSH-207ENST00000588269 SDCBP2Q9H190 292 aa12.43□□□□□ -0.42
PRKCSH-207ENST00000588269 APOBEC3GQ9HC16 384 aaKnown RBP12.43□□□□□ -0.42
PRKCSH-207ENST00000588269 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.43□□□□□ -0.421e-6■■□□□ 12.4
PRKCSH-207ENST00000588269 HEBP1Q9NRV9 189 aa12.43□□□□□ -0.42
PRKCSH-207ENST00000588269 FAM49BQ9NUQ9 324 aa12.43□□□□□ -0.42
PRKCSH-207ENST00000588269 COQ4Q9Y3A0 265 aa12.43□□□□□ -0.42
PRKCSH-207ENST00000588269 FANCMQ8IYD8 2048 aa12.43□□□□□ -0.42
PRKCSH-207ENST00000588269 MBD3O95983 291 aa12.42□□□□□ -0.42
PRKCSH-207ENST00000588269 CCDC130P13994 396 aa12.42□□□□□ -0.42
PRKCSH-207ENST00000588269 FMO5P49326 533 aa12.42□□□□□ -0.42
PRKCSH-207ENST00000588269 TUBP50607 506 aa12.42□□□□□ -0.42
PRKCSH-207ENST00000588269 MARSP56192 900 aaKnown RBP12.42□□□□□ -0.42
PRKCSH-207ENST00000588269 GOLGA8FQ08AF8 430 aa12.42□□□□□ -0.42
PRKCSH-207ENST00000588269 GOLGA8DPQ0D2H9 430 aa12.42□□□□□ -0.42
PRKCSH-207ENST00000588269 IFRD2Q12894 506 aaPredicted RBP12.42□□□□□ -0.42
PRKCSH-207ENST00000588269 CUL2Q13617 745 aa12.42□□□□□ -0.42
PRKCSH-207ENST00000588269 LRRC32Q14392 662 aa12.42□□□□□ -0.42
PRKCSH-207ENST00000588269 CBWD6Q4V339 395 aa12.42□□□□□ -0.42
PRKCSH-207ENST00000588269 CBWD3Q5JTY5 395 aa12.42□□□□□ -0.42
PRKCSH-207ENST00000588269 CBWD5Q5RIA9 395 aa12.42□□□□□ -0.42
PRKCSH-207ENST00000588269 TXNDC8Q6A555 127 aa12.42□□□□□ -0.42
PRKCSH-207ENST00000588269 TMEM150AQ86TG1 271 aa12.42□□□□□ -0.42
PRKCSH-207ENST00000588269 TADA2BQ86TJ2 420 aa12.42□□□□□ -0.42
PRKCSH-207ENST00000588269 RALGPS2Q86X27 583 aaPredicted RBP12.42□□□□□ -0.42
PRKCSH-207ENST00000588269 FUKQ8N0W3 1084 aa12.42□□□□□ -0.42
PRKCSH-207ENST00000588269 CPA6Q8N4T0 437 aa12.42□□□□□ -0.42
PRKCSH-207ENST00000588269 KIAA1958Q8N8K9 716 aa12.42□□□□□ -0.42
PRKCSH-207ENST00000588269 HNRNPABQ99729 332 aaKnown RBP12.42□□□□□ -0.42
PRKCSH-207ENST00000588269 DDX23Q9BUQ8 820 aaKnown RBP12.42□□□□□ -0.42
PRKCSH-207ENST00000588269 SLC46A2Q9BY10 475 aa12.42□□□□□ -0.42
PRKCSH-207ENST00000588269 PLA2G2FQ9BZM2 168 aa12.42□□□□□ -0.42
PRKCSH-207ENST00000588269 LTB4R2Q9NPC1 389 aa12.42□□□□□ -0.42
PRKCSH-207ENST00000588269 CISHQ9NSE2 258 aa12.42□□□□□ -0.42
PRKCSH-207ENST00000588269 HESX1Q9UBX0 185 aa12.42□□□□□ -0.42
PRKCSH-207ENST00000588269 HMGXB4Q9UGU5 601 aa12.42□□□□□ -0.42
PRKCSH-207ENST00000588269 ARHGAP26Q9UNA1 814 aa12.42□□□□□ -0.42
PRKCSH-207ENST00000588269 PTPRDP23468 1912 aa12.42□□□□□ -0.42
PRKCSH-207ENST00000588269 CLDN5O00501 218 aa12.41□□□□□ -0.42
PRKCSH-207ENST00000588269 NRG2O14511 850 aaPredicted RBP12.41□□□□□ -0.42
PRKCSH-207ENST00000588269 SLC9A3R1O14745 358 aaPredicted RBP12.41□□□□□ -0.42
PRKCSH-207ENST00000588269 TADA3O75528 432 aa12.41□□□□□ -0.42
PRKCSH-207ENST00000588269 ABL1P00519 1130 aa12.41□□□□□ -0.42
PRKCSH-207ENST00000588269 AFPP02771 609 aaKnown RBP12.41□□□□□ -0.42
PRKCSH-207ENST00000588269 HDCP19113 662 aa12.41□□□□□ -0.42
PRKCSH-207ENST00000588269 BMP6P22004 513 aa12.41□□□□□ -0.42
PRKCSH-207ENST00000588269 ADORA2BP29275 332 aa12.41□□□□□ -0.42
PRKCSH-207ENST00000588269 IFNAR2P48551 515 aa12.41□□□□□ -0.42
PRKCSH-207ENST00000588269 STX17P56962 302 aa12.41□□□□□ -0.42
PRKCSH-207ENST00000588269 TAF10Q12962 218 aa12.41□□□□□ -0.42
PRKCSH-207ENST00000588269 USP4Q13107 963 aa12.41□□□□□ -0.42
PRKCSH-207ENST00000588269 MTF1Q14872 753 aa12.41□□□□□ -0.42
PRKCSH-207ENST00000588269 ITPRIPL2Q3MIP1 535 aa12.41□□□□□ -0.42
PRKCSH-207ENST00000588269 CT47A1Q5JQC4 288 aaPredicted RBP12.41□□□□□ -0.42
PRKCSH-207ENST00000588269 ZC3H14Q6PJT7 736 aaKnown RBP12.41□□□□□ -0.42
PRKCSH-207ENST00000588269 C1orf210Q8IVY1 113 aa12.41□□□□□ -0.42
PRKCSH-207ENST00000588269 FAM3CQ92520 227 aa12.41□□□□□ -0.42
PRKCSH-207ENST00000588269 USP13Q92995 863 aaPredicted RBP12.41□□□□□ -0.42
PRKCSH-207ENST00000588269 ATP2A3Q93084 1043 aa12.41□□□□□ -0.42
PRKCSH-207ENST00000588269 CYFIP2Q96F07 1278 aa12.41□□□□□ -0.42
PRKCSH-207ENST00000588269 TMEM176AQ96HP8 235 aa12.41□□□□□ -0.42
PRKCSH-207ENST00000588269 HEXIM2Q96MH2 286 aaKnown RBP12.41□□□□□ -0.42
PRKCSH-207ENST00000588269 CDK5RAP1Q96SZ6 601 aaKnown RBP12.41□□□□□ -0.42
PRKCSH-207ENST00000588269 DUSP9Q99956 384 aaKnown RBP12.41□□□□□ -0.42
PRKCSH-207ENST00000588269 SRRTQ9BXP5 876 aaKnown RBP12.41□□□□□ -0.42
PRKCSH-207ENST00000588269 TLR8Q9NR97 1041 aaKnown RBP12.41□□□□□ -0.42
PRKCSH-207ENST00000588269 NME7Q9Y5B8 376 aa12.41□□□□□ -0.42
PRKCSH-207ENST00000588269 PATJQ8NI35 1801 aa12.41□□□□□ -0.42
PRKCSH-207ENST00000588269 SPTBN4Q9H254 2564 aa12.4□□□□□ -0.42
PRKCSH-207ENST00000588269 ZNF840PA6NDX5 716 aa12.4□□□□□ -0.42
PRKCSH-207ENST00000588269 FAM170BA6NMN3 283 aa12.4□□□□□ -0.42
PRKCSH-207ENST00000588269 NFATC1O95644 943 aa12.4□□□□□ -0.42
PRKCSH-207ENST00000588269 TCF3P15923 654 aa12.4□□□□□ -0.42
PRKCSH-207ENST00000588269 RPS9P46781 194 aaKnown RBP12.4□□□□□ -0.42
PRKCSH-207ENST00000588269 MAP3K7CLP57077 242 aa12.4□□□□□ -0.42
PRKCSH-207ENST00000588269 NR1H3Q13133 447 aa12.4□□□□□ -0.42
PRKCSH-207ENST00000588269 ORC1Q13415 861 aa12.4□□□□□ -0.42
PRKCSH-207ENST00000588269 STILQ15468 1287 aa12.4□□□□□ -0.42
PRKCSH-207ENST00000588269 TSSK4Q6SA08 328 aa12.4□□□□□ -0.42
PRKCSH-207ENST00000588269 TRIM59Q8IWR1 403 aa12.4□□□□□ -0.42
PRKCSH-207ENST00000588269 PPM1KQ8N3J5 372 aa12.4□□□□□ -0.42
PRKCSH-207ENST00000588269 ARL14EPQ8N8R7 260 aaPredicted RBP12.4□□□□□ -0.42
PRKCSH-207ENST00000588269 TTC16Q8NEE8 873 aa12.4□□□□□ -0.42
PRKCSH-207ENST00000588269 SEMA4DQ92854 862 aa12.4□□□□□ -0.42
PRKCSH-207ENST00000588269 CNOT6LQ96LI5 555 aaKnown RBP12.4□□□□□ -0.42
PRKCSH-207ENST00000588269 CSNK1G1Q9HCP0 422 aa12.4□□□□□ -0.42
PRKCSH-207ENST00000588269 KIAA1257Q9ULG3 409 aa12.4□□□□□ -0.42
PRKCSH-207ENST00000588269 ARNTLO00327 626 aa12.39□□□□□ -0.43
PRKCSH-207ENST00000588269 LAMTOR5O43504 91 aa12.39□□□□□ -0.43
PRKCSH-207ENST00000588269 TPM2P07951 284 aa12.39□□□□□ -0.43
PRKCSH-207ENST00000588269 MBL2P11226 248 aaPredicted RBP12.39□□□□□ -0.43
PRKCSH-207ENST00000588269 CD19P15391 556 aa12.39□□□□□ -0.43
PRKCSH-207ENST00000588269 ERCC5P28715 1186 aaPredicted RBP12.39□□□□□ -0.43
PRKCSH-207ENST00000588269 CTHP32929 405 aa12.39□□□□□ -0.43
PRKCSH-207ENST00000588269 PSEN1P49768 467 aa12.39□□□□□ -0.43
PRKCSH-207ENST00000588269 BCAT1P54687 386 aa12.39□□□□□ -0.43
PRKCSH-207ENST00000588269 USP46P62068 366 aa12.39□□□□□ -0.43
PRKCSH-207ENST00000588269 FOXK2Q01167 660 aa12.39□□□□□ -0.43
PRKCSH-207ENST00000588269 GCNT1Q02742 428 aa12.39□□□□□ -0.43
PRKCSH-207ENST00000588269 KCNH2Q12809 1159 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms