RNA–Protein interactions for RNA: ENST00000587697.1

TNFRSF11A-203, Transcript of TNF receptor superfamily member 11a, humanhuman

TSL 3

Gene TNFRSF11A, Length 528 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-203ENST00000587697 SCUBE3Q8IX30 993 aa12.54□□□□□ -0.4
TNFRSF11A-203ENST00000587697 SCML4Q8N228 414 aa12.54□□□□□ -0.4
TNFRSF11A-203ENST00000587697 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.54□□□□□ -0.4
TNFRSF11A-203ENST00000587697 CLEC4CQ8WTT0 213 aa12.54□□□□□ -0.4
TNFRSF11A-203ENST00000587697 ALG3Q92685 438 aa12.54□□□□□ -0.4
TNFRSF11A-203ENST00000587697 KCNK16Q96T55 309 aa12.54□□□□□ -0.4
TNFRSF11A-203ENST00000587697 ASNSD1Q9NWL6 643 aa12.54□□□□□ -0.4
TNFRSF11A-203ENST00000587697 SPG21Q9NZD8 308 aa12.54□□□□□ -0.4
TNFRSF11A-203ENST00000587697 BACE2Q9Y5Z0 518 aa12.54□□□□□ -0.4
TNFRSF11A-203ENST00000587697 CCDC66A2RUB6 948 aa12.53□□□□□ -0.4
TNFRSF11A-203ENST00000587697 KCNK3O14649 394 aa12.53□□□□□ -0.4
TNFRSF11A-203ENST00000587697 PSTPIP1O43586 416 aa12.53□□□□□ -0.4
TNFRSF11A-203ENST00000587697 FBXO21O94952 628 aa12.53□□□□□ -0.4
TNFRSF11A-203ENST00000587697 SLU7O95391 586 aaKnown RBP12.53□□□□□ -0.4
TNFRSF11A-203ENST00000587697 VNN2O95498 520 aa12.53□□□□□ -0.4
TNFRSF11A-203ENST00000587697 GPD1P21695 349 aa12.53□□□□□ -0.4
TNFRSF11A-203ENST00000587697 CXCR5P32302 372 aa12.53□□□□□ -0.4
TNFRSF11A-203ENST00000587697 PPM1AP35813 382 aa12.53□□□□□ -0.4
TNFRSF11A-203ENST00000587697 FLT3P36888 993 aa12.53□□□□□ -0.4
TNFRSF11A-203ENST00000587697 MAGEA11P43364 429 aa12.53□□□□□ -0.4
TNFRSF11A-203ENST00000587697 TKTL1P51854 596 aa12.53□□□□□ -0.4
TNFRSF11A-203ENST00000587697 ZNF143P52747 638 aaPredicted RBP12.53□□□□□ -0.4
TNFRSF11A-203ENST00000587697 TAS2R40P59535 323 aa12.53□□□□□ -0.4
TNFRSF11A-203ENST00000587697 DSG1Q02413 1049 aa12.53□□□□□ -0.4
TNFRSF11A-203ENST00000587697 GPR17Q13304 367 aa12.53□□□□□ -0.4
TNFRSF11A-203ENST00000587697 PSMD5Q16401 504 aa12.53□□□□□ -0.4
TNFRSF11A-203ENST00000587697 SLC8B1Q6J4K2 584 aa12.53□□□□□ -0.4
TNFRSF11A-203ENST00000587697 PRSS55Q6UWB4 352 aaPredicted RBP12.53□□□□□ -0.4
TNFRSF11A-203ENST00000587697 DDX53Q86TM3 631 aaKnown RBP12.53□□□□□ -0.4
TNFRSF11A-203ENST00000587697 FIBCD1Q8N539 461 aa12.53□□□□□ -0.4
TNFRSF11A-203ENST00000587697 EMC1Q8N766 993 aa12.53□□□□□ -0.4
TNFRSF11A-203ENST00000587697 KRT35Q92764 455 aa12.53□□□□□ -0.4
TNFRSF11A-203ENST00000587697 CLP1Q92989 425 aaKnown RBP12.53□□□□□ -0.4
TNFRSF11A-203ENST00000587697 TMEM169Q96HH4 297 aa12.53□□□□□ -0.4
TNFRSF11A-203ENST00000587697 PBKQ96KB5 322 aa12.53□□□□□ -0.4
TNFRSF11A-203ENST00000587697 PSMB7Q99436 277 aa12.53□□□□□ -0.4
TNFRSF11A-203ENST00000587697 LBHD1Q9BQE6 289 aaPredicted RBP12.53□□□□□ -0.4
TNFRSF11A-203ENST00000587697 CARD6Q9BX69 1037 aa12.53□□□□□ -0.4
TNFRSF11A-203ENST00000587697 CARD9Q9H257 536 aa12.53□□□□□ -0.4
TNFRSF11A-203ENST00000587697 LRRC4Q9HBW1 653 aa12.53□□□□□ -0.4
TNFRSF11A-203ENST00000587697 CNGB3Q9NQW8 809 aa12.53□□□□□ -0.4
TNFRSF11A-203ENST00000587697 AAASQ9NRG9 546 aa12.53□□□□□ -0.4
TNFRSF11A-203ENST00000587697 INSL6Q9Y581 213 aa12.53□□□□□ -0.4
TNFRSF11A-203ENST00000587697 PCDHB5Q9Y5E4 795 aa12.53□□□□□ -0.4
TNFRSF11A-203ENST00000587697 PCDHA3Q9Y5H8 950 aa12.53□□□□□ -0.4
TNFRSF11A-203ENST00000587697 SLC4A7Q9Y6M7 1214 aa12.53□□□□□ -0.4
TNFRSF11A-203ENST00000587697 MTMR11A4FU01 709 aa12.52□□□□□ -0.41
TNFRSF11A-203ENST00000587697 F8VP50 259 aa12.52□□□□□ -0.41
TNFRSF11A-203ENST00000587697 PDE2AO00408 941 aaPredicted RBP12.52□□□□□ -0.41
TNFRSF11A-203ENST00000587697 DAB1O75553 588 aa12.52□□□□□ -0.41
TNFRSF11A-203ENST00000587697 GLI1P08151 1106 aa12.52□□□□□ -0.41
TNFRSF11A-203ENST00000587697 CYP2F1P24903 491 aa12.52□□□□□ -0.41
TNFRSF11A-203ENST00000587697 PSMA2P25787 234 aa12.52□□□□□ -0.41
TNFRSF11A-203ENST00000587697 PTPN9P43378 593 aa12.52□□□□□ -0.41
TNFRSF11A-203ENST00000587697 GLUD2P49448 558 aa12.52□□□□□ -0.41
TNFRSF11A-203ENST00000587697 DNA2P51530 1060 aa12.52□□□□□ -0.41
TNFRSF11A-203ENST00000587697 CDR1P51861 262 aa12.52□□□□□ -0.41
TNFRSF11A-203ENST00000587697 RABGGTBP53611 331 aa12.52□□□□□ -0.41
TNFRSF11A-203ENST00000587697 TERF1P54274 439 aa12.52□□□□□ -0.41
TNFRSF11A-203ENST00000587697 DAOAP59103 153 aa12.52□□□□□ -0.41
TNFRSF11A-203ENST00000587697 MRPS5P82675 430 aaKnown RBP12.52□□□□□ -0.41
TNFRSF11A-203ENST00000587697 CKAP4Q07065 602 aaKnown RBP12.52□□□□□ -0.41
TNFRSF11A-203ENST00000587697 SMARCB1Q12824 385 aa12.52□□□□□ -0.41
TNFRSF11A-203ENST00000587697 ACAP1Q15027 740 aa12.52□□□□□ -0.41
TNFRSF11A-203ENST00000587697 TAF5Q15542 800 aa12.52□□□□□ -0.41
TNFRSF11A-203ENST00000587697 EFHC1Q5JVL4 640 aa12.52□□□□□ -0.41
TNFRSF11A-203ENST00000587697 DAB2IPQ5VWQ8 1189 aa12.52□□□□□ -0.41
TNFRSF11A-203ENST00000587697 VSTM1Q6UX27 236 aa12.52□□□□□ -0.41
TNFRSF11A-203ENST00000587697 BHLHA9Q7RTU4 235 aa12.52□□□□□ -0.41
TNFRSF11A-203ENST00000587697 GPR65Q8IYL9 337 aa12.52□□□□□ -0.41
TNFRSF11A-203ENST00000587697 SIX6OS1Q8N1H7 587 aa12.52□□□□□ -0.41
TNFRSF11A-203ENST00000587697 RASGEF1CQ8N431 466 aa12.52□□□□□ -0.41
TNFRSF11A-203ENST00000587697 ARFGAP1Q8N6T3 406 aa12.52□□□□□ -0.41
TNFRSF11A-203ENST00000587697 UBL4BQ8N7F7 174 aa12.52□□□□□ -0.41
TNFRSF11A-203ENST00000587697 CEP112Q8N8E3 955 aa12.52□□□□□ -0.41
TNFRSF11A-203ENST00000587697 LRRN4CLQ8ND94 238 aa12.52□□□□□ -0.41
TNFRSF11A-203ENST00000587697 MYRIPQ8NFW9 859 aa12.52□□□□□ -0.41
TNFRSF11A-203ENST00000587697 SPPL2BQ8TCT7 592 aa12.52□□□□□ -0.41
TNFRSF11A-203ENST00000587697 C2orf15Q8WU43 125 aaKnown RBP12.52□□□□□ -0.41
TNFRSF11A-203ENST00000587697 RXFP2Q8WXD0 754 aa12.52□□□□□ -0.41
TNFRSF11A-203ENST00000587697 RIN2Q8WYP3 895 aaPredicted RBP12.52□□□□□ -0.41
TNFRSF11A-203ENST00000587697 CAPZA3Q96KX2 299 aa12.52□□□□□ -0.41
TNFRSF11A-203ENST00000587697 C8orf48Q96LL4 319 aa12.52□□□□□ -0.41
TNFRSF11A-203ENST00000587697 RAD9AQ99638 391 aa12.52□□□□□ -0.41
TNFRSF11A-203ENST00000587697 CNPY3Q9BT09 278 aa12.52□□□□□ -0.41
TNFRSF11A-203ENST00000587697 C11orf84Q9BUA3 381 aaPredicted RBP12.52□□□□□ -0.41
TNFRSF11A-203ENST00000587697 ULBP1Q9BZM6 244 aa12.52□□□□□ -0.41
TNFRSF11A-203ENST00000587697 MTIF3Q9H2K0 278 aaKnown RBP12.52□□□□□ -0.41
TNFRSF11A-203ENST00000587697 ABI2Q9NYB9 513 aaPredicted RBP12.52□□□□□ -0.41
TNFRSF11A-203ENST00000587697 RNF14Q9UBS8 474 aa12.52□□□□□ -0.41
TNFRSF11A-203ENST00000587697 CDY1Q9Y6F8 540 aa12.52□□□□□ -0.41
TNFRSF11A-203ENST00000587697 TNFRSF10BO14763 440 aa12.51□□□□□ -0.41
TNFRSF11A-203ENST00000587697 ADAM12O43184 909 aa12.51□□□□□ -0.41
TNFRSF11A-203ENST00000587697 SART1O43290 800 aaKnown RBP12.51□□□□□ -0.41
TNFRSF11A-203ENST00000587697 HSF2BPO75031 334 aa12.51□□□□□ -0.41
TNFRSF11A-203ENST00000587697 LRCH4O75427 683 aa12.51□□□□□ -0.41
TNFRSF11A-203ENST00000587697 GRAP2O75791 330 aa12.51□□□□□ -0.41
TNFRSF11A-203ENST00000587697 CPB1P15086 417 aa12.51□□□□□ -0.41
TNFRSF11A-203ENST00000587697 ATP2A2P16615 1042 aaKnown RBP12.51□□□□□ -0.41
TNFRSF11A-203ENST00000587697 NDUFV1P49821 464 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms