RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 KCNE1P15382 129 aa19.48■□□□□ 0.71
RETREG3-205ENST00000586870 CA8P35219 290 aa19.48■□□□□ 0.71
RETREG3-205ENST00000586870 DSC1Q08554 894 aa19.48■□□□□ 0.71
RETREG3-205ENST00000586870 HLTFQ14527 1009 aaKnown RBP eCLIP19.48■□□□□ 0.71
RETREG3-205ENST00000586870 DENND1BQ6P3S1 775 aa19.48■□□□□ 0.71
RETREG3-205ENST00000586870 DNAJC24Q6P3W2 148 aa19.48■□□□□ 0.71
RETREG3-205ENST00000586870 C12orf50Q8NA57 414 aaPredicted RBP19.48■□□□□ 0.71
RETREG3-205ENST00000586870 MRPL38Q96DV4 380 aaKnown RBP19.48■□□□□ 0.71
RETREG3-205ENST00000586870 DDX27Q96GQ7 796 aaKnown RBP19.48■□□□□ 0.71
RETREG3-205ENST00000586870 IGSF21Q96ID5 467 aa19.48■□□□□ 0.71
RETREG3-205ENST00000586870 TSPAN18Q96SJ8 248 aa19.48■□□□□ 0.71
RETREG3-205ENST00000586870 ELOVL4Q9GZR5 314 aa19.48■□□□□ 0.71
RETREG3-205ENST00000586870 CNTN3Q9P232 1028 aa19.48■□□□□ 0.71
RETREG3-205ENST00000586870 MTCH2Q9Y6C9 303 aa19.48■□□□□ 0.71
RETREG3-205ENST00000586870 XPOTO43592 962 aaKnown RBP19.47■□□□□ 0.71
RETREG3-205ENST00000586870 HSF2BPO75031 334 aa19.47■□□□□ 0.71
RETREG3-205ENST00000586870 FAM153BP0C7A2 387 aa19.47■□□□□ 0.71
RETREG3-205ENST00000586870 DRG2P55039 364 aaKnown RBP19.47■□□□□ 0.71
RETREG3-205ENST00000586870 INCA1Q0VD86 236 aa19.47■□□□□ 0.71
RETREG3-205ENST00000586870 MYO1EQ12965 1108 aa19.47■□□□□ 0.71
RETREG3-205ENST00000586870 TERF2Q15554 542 aa19.47■□□□□ 0.71
RETREG3-205ENST00000586870 TRADDQ15628 312 aa19.47■□□□□ 0.71
RETREG3-205ENST00000586870 CCDC85BQ15834 202 aaPredicted RBP19.47■□□□□ 0.71
RETREG3-205ENST00000586870 ZBTB6Q15916 424 aa19.47■□□□□ 0.71
RETREG3-205ENST00000586870 FAM153CQ494X1 144 aa19.47■□□□□ 0.71
RETREG3-205ENST00000586870 XKR4Q5GH76 650 aa19.47■□□□□ 0.71
RETREG3-205ENST00000586870 BEST2Q8NFU1 509 aa19.47■□□□□ 0.71
RETREG3-205ENST00000586870 PPP1R10Q96QC0 940 aaKnown RBP19.47■□□□□ 0.71
RETREG3-205ENST00000586870 ERP44Q9BS26 406 aa19.47■□□□□ 0.71
RETREG3-205ENST00000586870 FAM153AQ9UHL3 310 aa19.47■□□□□ 0.71
RETREG3-205ENST00000586870 BARX2Q9UMQ3 279 aaPredicted RBP19.47■□□□□ 0.71
RETREG3-205ENST00000586870 LZTS1Q9Y250 596 aa19.47■□□□□ 0.71
RETREG3-205ENST00000586870 CITO14578 2027 aa19.47■□□□□ 0.71
RETREG3-205ENST00000586870 PODXLO00592 558 aa19.47■□□□□ 0.71
RETREG3-205ENST00000586870 B4GALT3O60512 393 aa19.47■□□□□ 0.71
RETREG3-205ENST00000586870 SYF2O95926 243 aaKnown RBP19.47■□□□□ 0.71
RETREG3-205ENST00000586870 RARAP10276 462 aa19.47■□□□□ 0.71
RETREG3-205ENST00000586870 ECHS1P30084 290 aa19.47■□□□□ 0.71
RETREG3-205ENST00000586870 PTGIRP43119 386 aa19.47■□□□□ 0.71
RETREG3-205ENST00000586870 FNTAP49354 379 aa19.47■□□□□ 0.71
RETREG3-205ENST00000586870 GUCY2FP51841 1108 aa19.47■□□□□ 0.71
RETREG3-205ENST00000586870 SIX1Q15475 284 aaPredicted RBP19.47■□□□□ 0.71
RETREG3-205ENST00000586870 CNGA2Q16280 664 aa19.47■□□□□ 0.71
RETREG3-205ENST00000586870 PPP1R15BQ5SWA1 713 aa19.47■□□□□ 0.71
RETREG3-205ENST00000586870 TMC7Q7Z402 723 aa19.47■□□□□ 0.71
RETREG3-205ENST00000586870 KATNAL2Q8IYT4 538 aa19.47■□□□□ 0.71
RETREG3-205ENST00000586870 ZDHHC14Q8IZN3 488 aa19.47■□□□□ 0.71
RETREG3-205ENST00000586870 TSEN2Q8NCE0 465 aaKnown RBP19.47■□□□□ 0.71
RETREG3-205ENST00000586870 C3orf20Q8ND61 904 aa19.47■□□□□ 0.71
RETREG3-205ENST00000586870 UROC1Q96N76 676 aa19.47■□□□□ 0.71
RETREG3-205ENST00000586870 ENTPD7Q9NQZ7 604 aa19.47■□□□□ 0.71
RETREG3-205ENST00000586870 TLR9Q9NR96 1032 aa19.47■□□□□ 0.71
RETREG3-205ENST00000586870 WDR35Q9P2L0 1181 aa19.47■□□□□ 0.71
RETREG3-205ENST00000586870 STK39Q9UEW8 545 aa19.47■□□□□ 0.71
RETREG3-205ENST00000586870 AGPSO00116 658 aa19.46■□□□□ 0.71
RETREG3-205ENST00000586870 DAPK3O43293 454 aa19.46■□□□□ 0.71
RETREG3-205ENST00000586870 OPA1O60313 960 aa19.46■□□□□ 0.71
RETREG3-205ENST00000586870 POU3F3P20264 500 aaPredicted RBP19.46■□□□□ 0.71
RETREG3-205ENST00000586870 COILP38432 576 aaPredicted RBP19.46■□□□□ 0.71
RETREG3-205ENST00000586870 HSPA9P38646 679 aaKnown RBP19.46■□□□□ 0.71
RETREG3-205ENST00000586870 GSCP56915 257 aaPredicted RBP19.46■□□□□ 0.71
RETREG3-205ENST00000586870 DUPD1Q68J44 220 aa19.46■□□□□ 0.71
RETREG3-205ENST00000586870 DCUN1D2Q6PH85 259 aa19.46■□□□□ 0.71
RETREG3-205ENST00000586870 DDX53Q86TM3 631 aaKnown RBP19.46■□□□□ 0.71
RETREG3-205ENST00000586870 DDX42Q86XP3 938 aaKnown RBP eCLIP19.46■□□□□ 0.71
RETREG3-205ENST00000586870 JAMLQ86YT9 394 aa19.46■□□□□ 0.71
RETREG3-205ENST00000586870 LRRC52Q8N7C0 313 aa19.46■□□□□ 0.71
RETREG3-205ENST00000586870 PPP2R3CQ969Q6 453 aa19.46■□□□□ 0.71
RETREG3-205ENST00000586870 LRRC45Q96CN5 670 aa19.46■□□□□ 0.71
RETREG3-205ENST00000586870 ZMAT2Q96NC0 199 aaKnown RBP19.46■□□□□ 0.71
RETREG3-205ENST00000586870 TWNKQ96RR1 684 aa19.46■□□□□ 0.71
RETREG3-205ENST00000586870 LRRC19Q9H756 370 aa19.46■□□□□ 0.71
RETREG3-205ENST00000586870 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.46■□□□□ 0.71
RETREG3-205ENST00000586870 GBP1P32455 592 aa19.45■□□□□ 0.7
RETREG3-205ENST00000586870 GGCXP38435 758 aa19.45■□□□□ 0.7
RETREG3-205ENST00000586870 TAS2R40P59535 323 aa19.45■□□□□ 0.7
RETREG3-205ENST00000586870 PIGHQ14442 188 aaPredicted RBP19.45■□□□□ 0.7
RETREG3-205ENST00000586870 SKIV2LQ15477 1246 aaKnown RBP19.45■□□□□ 0.7
RETREG3-205ENST00000586870 TIGD5Q53EQ6 642 aa19.45■□□□□ 0.7
RETREG3-205ENST00000586870 LRRC38Q5VT99 294 aa19.45■□□□□ 0.7
RETREG3-205ENST00000586870 CCDC137Q6PK04 289 aaKnown RBP19.45■□□□□ 0.7
RETREG3-205ENST00000586870 TMEM173Q86WV6 379 aaPredicted RBP19.45■□□□□ 0.7
RETREG3-205ENST00000586870 VPS52Q8N1B4 723 aa19.45■□□□□ 0.7
RETREG3-205ENST00000586870 TMEM130Q8N3G9 435 aa19.45■□□□□ 0.7
RETREG3-205ENST00000586870 EXD1Q8NHP7 514 aa19.45■□□□□ 0.7
RETREG3-205ENST00000586870 TCF25Q9BQ70 676 aa19.45■□□□□ 0.7
RETREG3-205ENST00000586870 TRIM51Q9BSJ1 452 aa19.45■□□□□ 0.7
RETREG3-205ENST00000586870 CACNG4Q9UBN1 327 aa19.45■□□□□ 0.7
RETREG3-205ENST00000586870 UBQLN1Q9UMX0 589 aaKnown RBP19.45■□□□□ 0.7
RETREG3-205ENST00000586870 B3GAT3O94766 335 aa19.44■□□□□ 0.7
RETREG3-205ENST00000586870 DNAJB1P25685 340 aa19.44■□□□□ 0.7
RETREG3-205ENST00000586870 CETN2P41208 172 aa19.44■□□□□ 0.7
RETREG3-205ENST00000586870 CLCNKBP51801 687 aa19.44■□□□□ 0.7
RETREG3-205ENST00000586870 RPL7AP62424 266 aaKnown RBP19.44■□□□□ 0.7
RETREG3-205ENST00000586870 STILQ15468 1287 aa19.44■□□□□ 0.7
RETREG3-205ENST00000586870 SGO2Q562F6 1265 aa19.44■□□□□ 0.7
RETREG3-205ENST00000586870 CFAP58Q5T655 872 aa19.44■□□□□ 0.7
RETREG3-205ENST00000586870 PDE12Q6L8Q7 609 aaKnown RBP19.44■□□□□ 0.7
RETREG3-205ENST00000586870 DCLRE1AQ6PJP8 1040 aa19.44■□□□□ 0.7
RETREG3-205ENST00000586870 NIPA2Q8N8Q9 360 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms