RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 GDE1Q9NZC3 331 aa20.23■□□□□ 0.83
DDX39A-204ENST00000586558 NCANO14594 1321 aa20.23■□□□□ 0.83
DDX39A-204ENST00000586558 DENND4AQ7Z401 1863 aa20.22■□□□□ 0.83
DDX39A-204ENST00000586558 FAM92AA1XBS5 289 aa20.22■□□□□ 0.83
DDX39A-204ENST00000586558 F11P03951 625 aa20.22■□□□□ 0.83
DDX39A-204ENST00000586558 FERP16591 822 aa20.22■□□□□ 0.83
DDX39A-204ENST00000586558 USP46P62068 366 aa20.22■□□□□ 0.83
DDX39A-204ENST00000586558 ARHGAP15Q53QZ3 475 aa20.22■□□□□ 0.83
DDX39A-204ENST00000586558 TJAP1Q5JTD0 557 aa20.22■□□□□ 0.83
DDX39A-204ENST00000586558 GET4Q7L5D6 327 aaPredicted RBP20.22■□□□□ 0.83
DDX39A-204ENST00000586558 VSTM4Q8IW00 320 aa20.22■□□□□ 0.83
DDX39A-204ENST00000586558 TDRD5Q8NAT2 981 aaKnown RBP20.22■□□□□ 0.83
DDX39A-204ENST00000586558 ITFG1Q8TB96 612 aa20.22■□□□□ 0.83
DDX39A-204ENST00000586558 SHKBP1Q8TBC3 707 aa20.22■□□□□ 0.83
DDX39A-204ENST00000586558 STK32AQ8WU08 396 aa20.22■□□□□ 0.83
DDX39A-204ENST00000586558 SLC35F5Q8WV83 523 aa20.22■□□□□ 0.83
DDX39A-204ENST00000586558 KCTD13Q8WZ19 329 aa20.22■□□□□ 0.83
DDX39A-204ENST00000586558 SECISBP2LQ93073 1101 aaKnown RBP20.22■□□□□ 0.83
DDX39A-204ENST00000586558 TCEAL4Q96EI5 215 aa20.22■□□□□ 0.83
DDX39A-204ENST00000586558 LHX5Q9H2C1 402 aa20.22■□□□□ 0.83
DDX39A-204ENST00000586558 CDH7Q9ULB5 785 aa20.22■□□□□ 0.83
DDX39A-204ENST00000586558 CEP83Q9Y592 693 aa20.22■□□□□ 0.83
DDX39A-204ENST00000586558 XIRP2A4UGR9 3374 aa20.22■□□□□ 0.83
DDX39A-204ENST00000586558 A0A1W2PRU2 124 aa20.21■□□□□ 0.83
DDX39A-204ENST00000586558 SOBPA7XYQ1 873 aa20.21■□□□□ 0.83
DDX39A-204ENST00000586558 GPD2P43304 727 aa20.21■□□□□ 0.83
DDX39A-204ENST00000586558 KIF11P52732 1056 aa20.21■□□□□ 0.83
DDX39A-204ENST00000586558 RAB41Q5JT25 222 aa20.21■□□□□ 0.83
DDX39A-204ENST00000586558 GPRIN1Q7Z2K8 1008 aa20.21■□□□□ 0.83
DDX39A-204ENST00000586558 NOP9Q86U38 636 aaKnown RBP20.21■□□□□ 0.83
DDX39A-204ENST00000586558 NPAS3Q8IXF0 933 aa20.21■□□□□ 0.83
DDX39A-204ENST00000586558 SCAMP5Q8TAC9 235 aa20.21■□□□□ 0.83
DDX39A-204ENST00000586558 DDX1Q92499 740 aaKnown RBP20.21■□□□□ 0.83
DDX39A-204ENST00000586558 MRPS31Q92665 395 aaKnown RBP20.21■□□□□ 0.83
DDX39A-204ENST00000586558 FGF13Q92913 245 aa20.21■□□□□ 0.83
DDX39A-204ENST00000586558 FBXO32Q969P5 355 aa20.21■□□□□ 0.83
DDX39A-204ENST00000586558 HSFY1Q96LI6 401 aa20.21■□□□□ 0.83
DDX39A-204ENST00000586558 ATXN3LQ9H3M9 355 aa20.21■□□□□ 0.83
DDX39A-204ENST00000586558 TRPM5Q9NZQ8 1165 aa20.21■□□□□ 0.83
DDX39A-204ENST00000586558 NOCTQ9UK39 431 aaKnown RBP20.21■□□□□ 0.83
DDX39A-204ENST00000586558 CAPN11Q9UMQ6 739 aa20.21■□□□□ 0.83
DDX39A-204ENST00000586558 SCML2Q9UQR0 700 aa20.21■□□□□ 0.83
DDX39A-204ENST00000586558 LRRC53A6NM62 1247 aa20.2■□□□□ 0.82
DDX39A-204ENST00000586558 AP5Z1O43299 807 aa20.2■□□□□ 0.82
DDX39A-204ENST00000586558 MOSPD3O75425 235 aa20.2■□□□□ 0.82
DDX39A-204ENST00000586558 LSM8O95777 96 aaKnown RBP20.2■□□□□ 0.82
DDX39A-204ENST00000586558 CEBPBP17676 345 aa20.2■□□□□ 0.82
DDX39A-204ENST00000586558 DDX6P26196 483 aaKnown RBP eCLIP20.2■□□□□ 0.82
DDX39A-204ENST00000586558 GBP2P32456 591 aaPredicted RBP20.2■□□□□ 0.82
DDX39A-204ENST00000586558 ZBED6P86452 979 aa20.2■□□□□ 0.82
DDX39A-204ENST00000586558 ZP2Q05996 745 aa20.2■□□□□ 0.82
DDX39A-204ENST00000586558 TAF10Q12962 218 aa20.2■□□□□ 0.82
DDX39A-204ENST00000586558 DENND1BQ6P3S1 775 aa20.2■□□□□ 0.82
DDX39A-204ENST00000586558 CCDC186Q7Z3E2 898 aa20.2■□□□□ 0.82
DDX39A-204ENST00000586558 TMEM150AQ86TG1 271 aa20.2■□□□□ 0.82
DDX39A-204ENST00000586558 PLCD3Q8N3E9 789 aa20.2■□□□□ 0.82
DDX39A-204ENST00000586558 ING5Q8WYH8 240 aa20.2■□□□□ 0.82
DDX39A-204ENST00000586558 SYN2Q92777 582 aaPredicted RBP20.2■□□□□ 0.82
DDX39A-204ENST00000586558 MRFAP1L1Q96HT8 127 aa20.2■□□□□ 0.82
DDX39A-204ENST00000586558 NOX5Q96PH1 765 aa20.2■□□□□ 0.82
DDX39A-204ENST00000586558 PDCL3Q9H2J4 239 aa20.2■□□□□ 0.82
DDX39A-204ENST00000586558 LRRC4Q9HBW1 653 aa20.2■□□□□ 0.82
DDX39A-204ENST00000586558 CYLDQ9NQC7 956 aa20.2■□□□□ 0.82
DDX39A-204ENST00000586558 AIPL1Q9NZN9 384 aa20.2■□□□□ 0.82
DDX39A-204ENST00000586558 EPS15L1Q9UBC2 864 aa20.2■□□□□ 0.82
DDX39A-204ENST00000586558 LUC7L2Q9Y383 392 aaKnown RBP20.2■□□□□ 0.82
DDX39A-204ENST00000586558 USP3Q9Y6I4 520 aa20.2■□□□□ 0.82
DDX39A-204ENST00000586558 PATJQ8NI35 1801 aa20.2■□□□□ 0.82
DDX39A-204ENST00000586558 TULP2O00295 520 aa20.19■□□□□ 0.82
DDX39A-204ENST00000586558 GYPCP04921 128 aa20.19■□□□□ 0.82
DDX39A-204ENST00000586558 TPM1P09493 284 aa20.19■□□□□ 0.82
DDX39A-204ENST00000586558 ACADSBP45954 432 aa20.19■□□□□ 0.82
DDX39A-204ENST00000586558 CDR2Q01850 454 aa20.19■□□□□ 0.82
DDX39A-204ENST00000586558 ARID5AQ03989 594 aa20.19■□□□□ 0.82
DDX39A-204ENST00000586558 IFRD2Q12894 506 aaPredicted RBP20.19■□□□□ 0.82
DDX39A-204ENST00000586558 SFMBT2Q5VUG0 894 aa20.19■□□□□ 0.82
DDX39A-204ENST00000586558 ZDHHC14Q8IZN3 488 aa20.19■□□□□ 0.82
DDX39A-204ENST00000586558 SIX6OS1Q8N1H7 587 aa20.19■□□□□ 0.82
DDX39A-204ENST00000586558 RPGRIP1Q96KN7 1286 aa20.19■□□□□ 0.82
DDX39A-204ENST00000586558 MYADMQ96S97 322 aa20.19■□□□□ 0.82
DDX39A-204ENST00000586558 LOC730098B7Z3J9 87 aa20.18■□□□□ 0.82
DDX39A-204ENST00000586558 TADA3O75528 432 aa20.18■□□□□ 0.82
DDX39A-204ENST00000586558 CFHP08603 1231 aa20.18■□□□□ 0.82
DDX39A-204ENST00000586558 LAMP2P13473 410 aa20.18■□□□□ 0.82
DDX39A-204ENST00000586558 PFKLP17858 780 aa20.18■□□□□ 0.82
DDX39A-204ENST00000586558 SSTR3P32745 418 aaPredicted RBP20.18■□□□□ 0.82
DDX39A-204ENST00000586558 CDH5P33151 784 aaPredicted RBP20.18■□□□□ 0.82
DDX39A-204ENST00000586558 RPL34P49207 117 aaKnown RBP20.18■□□□□ 0.82
DDX39A-204ENST00000586558 ZNF75DP51815 510 aa20.18■□□□□ 0.82
DDX39A-204ENST00000586558 TKTL1P51854 596 aa20.18■□□□□ 0.82
DDX39A-204ENST00000586558 SNX16P57768 344 aa20.18■□□□□ 0.82
DDX39A-204ENST00000586558 TEAD2Q15562 447 aa20.18■□□□□ 0.82
DDX39A-204ENST00000586558 ASIC2Q16515 512 aa20.18■□□□□ 0.82
DDX39A-204ENST00000586558 TAF3Q5VWG9 929 aa20.18■□□□□ 0.82
DDX39A-204ENST00000586558 PMF1Q6P1K2 205 aa20.18■□□□□ 0.82
DDX39A-204ENST00000586558 TRIM72Q6ZMU5 477 aa20.18■□□□□ 0.82
DDX39A-204ENST00000586558 IRF2BP2Q7Z5L9 587 aa20.18■□□□□ 0.82
DDX39A-204ENST00000586558 SCML4Q8N228 414 aa20.18■□□□□ 0.82
DDX39A-204ENST00000586558 TMEM35BQ8NCS4 154 aa20.18■□□□□ 0.82
DDX39A-204ENST00000586558 SLITRK6Q9H5Y7 841 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms