RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 C4orf50Q6ZRC1 276 aa12.69□□□□□ -0.38
BRCA1-225ENST00000586385 SV2BQ7L1I2 683 aa12.69□□□□□ -0.38
BRCA1-225ENST00000586385 C11orf74Q86VG3 221 aa12.69□□□□□ -0.38
BRCA1-225ENST00000586385 TMEFF1Q8IYR6 380 aa12.69□□□□□ -0.38
BRCA1-225ENST00000586385 GPD1LQ8N335 351 aa12.69□□□□□ -0.38
BRCA1-225ENST00000586385 KIAA1958Q8N8K9 716 aa12.69□□□□□ -0.38
BRCA1-225ENST00000586385 MYCBPAPQ8TBZ2 947 aa12.69□□□□□ -0.38
BRCA1-225ENST00000586385 WBP2Q969T9 261 aa12.69□□□□□ -0.38
BRCA1-225ENST00000586385 ZFRQ96KR1 1074 aaKnown RBP12.69□□□□□ -0.38
BRCA1-225ENST00000586385 SCNM1Q9BWG6 230 aa12.69□□□□□ -0.38
BRCA1-225ENST00000586385 GZF1Q9H116 711 aaPredicted RBP12.69□□□□□ -0.38
BRCA1-225ENST00000586385 DPEP3Q9H4B8 488 aa12.69□□□□□ -0.38
BRCA1-225ENST00000586385 FSCN3Q9NQT6 498 aa12.69□□□□□ -0.38
BRCA1-225ENST00000586385 TRPM5Q9NZQ8 1165 aa12.69□□□□□ -0.38
BRCA1-225ENST00000586385 CFAP97Q9P2B7 532 aa12.69□□□□□ -0.38
BRCA1-225ENST00000586385 PCDHB13Q9Y5F0 798 aa12.69□□□□□ -0.38
BRCA1-225ENST00000586385 AKAP13Q12802 2813 aa12.68□□□□□ -0.38
BRCA1-225ENST00000586385 ASCC3Q8N3C0 2202 aaKnown RBP12.68□□□□□ -0.38
BRCA1-225ENST00000586385 NUP205Q92621 2012 aa12.68□□□□□ -0.38
BRCA1-225ENST00000586385 KAT7O95251 611 aa12.68□□□□□ -0.38
BRCA1-225ENST00000586385 CST3P01034 146 aaPredicted RBP12.68□□□□□ -0.38
BRCA1-225ENST00000586385 IDEP14735 1019 aa12.68□□□□□ -0.38
BRCA1-225ENST00000586385 TIE1P35590 1138 aa12.68□□□□□ -0.38
BRCA1-225ENST00000586385 CYP27A1Q02318 531 aa12.68□□□□□ -0.38
BRCA1-225ENST00000586385 TAF10Q12962 218 aa12.68□□□□□ -0.38
BRCA1-225ENST00000586385 RESTQ13127 1097 aa12.68□□□□□ -0.38
BRCA1-225ENST00000586385 UAP1L1Q3KQV9 507 aa12.68□□□□□ -0.38
BRCA1-225ENST00000586385 TRIM61Q5EBN2 209 aa12.68□□□□□ -0.38
BRCA1-225ENST00000586385 PEAR1Q5VY43 1037 aaPredicted RBP12.68□□□□□ -0.38
BRCA1-225ENST00000586385 ARMCX6Q7L4S7 300 aa12.68□□□□□ -0.38
BRCA1-225ENST00000586385 TTC30AQ86WT1 665 aa12.68□□□□□ -0.38
BRCA1-225ENST00000586385 ETFBKMTQ8IXQ9 262 aa12.68□□□□□ -0.38
BRCA1-225ENST00000586385 SYCP3Q8IZU3 236 aa12.68□□□□□ -0.38
BRCA1-225ENST00000586385 CCDC26Q8TAB7 109 aa12.68□□□□□ -0.38
BRCA1-225ENST00000586385 NOC3LQ8WTT2 800 aaKnown RBP12.68□□□□□ -0.38
BRCA1-225ENST00000586385 C8orf48Q96LL4 319 aa12.68□□□□□ -0.38
BRCA1-225ENST00000586385 CEP295NLQ96MC4 621 aa12.68□□□□□ -0.38
BRCA1-225ENST00000586385 PNKPQ96T60 521 aa12.68□□□□□ -0.38
BRCA1-225ENST00000586385 PANK2Q9BZ23 570 aa12.68□□□□□ -0.38
BRCA1-225ENST00000586385 ZNF518BQ9C0D4 1074 aa12.68□□□□□ -0.38
BRCA1-225ENST00000586385 PANK4Q9NVE7 773 aa12.68□□□□□ -0.38
BRCA1-225ENST00000586385 CCDC39Q9UFE4 941 aa12.68□□□□□ -0.38
BRCA1-225ENST00000586385 ATXN2Q99700 1313 aaKnown RBP12.67□□□□□ -0.38
BRCA1-225ENST00000586385 ATRXP46100 2492 aa12.67□□□□□ -0.38
BRCA1-225ENST00000586385 HELZP42694 1942 aaKnown RBP12.67□□□□□ -0.38
BRCA1-225ENST00000586385 CLDN5O00501 218 aa12.67□□□□□ -0.38
BRCA1-225ENST00000586385 TNFRSF10BO14763 440 aa12.67□□□□□ -0.38
BRCA1-225ENST00000586385 EIF2DP41214 584 aaKnown RBP12.67□□□□□ -0.38
BRCA1-225ENST00000586385 PDE6CP51160 858 aa12.67□□□□□ -0.38
BRCA1-225ENST00000586385 KDSRQ06136 332 aa12.67□□□□□ -0.38
BRCA1-225ENST00000586385 MYO1EQ12965 1108 aa12.67□□□□□ -0.38
BRCA1-225ENST00000586385 ALCAMQ13740 583 aa12.67□□□□□ -0.38
BRCA1-225ENST00000586385 DUOXA2Q1HG44 320 aa12.67□□□□□ -0.38
BRCA1-225ENST00000586385 LY6G5CQ5SRR4 150 aa12.67□□□□□ -0.38
BRCA1-225ENST00000586385 KIAA1211LQ6NV74 962 aa12.67□□□□□ -0.38
BRCA1-225ENST00000586385 TRAPPC11Q7Z392 1133 aa12.67□□□□□ -0.38
BRCA1-225ENST00000586385 PIP4P1Q86T03 277 aa12.67□□□□□ -0.38
BRCA1-225ENST00000586385 MIB1Q86YT6 1006 aa12.67□□□□□ -0.38
BRCA1-225ENST00000586385 ANKRD36BP1Q96IX9 119 aa12.67□□□□□ -0.38
BRCA1-225ENST00000586385 B3GNT5Q9BYG0 378 aa12.67□□□□□ -0.38
BRCA1-225ENST00000586385 CD248Q9HCU0 757 aa12.67□□□□□ -0.38
BRCA1-225ENST00000586385 PILRBQ9UKJ0 227 aa12.67□□□□□ -0.38
BRCA1-225ENST00000586385 GON4LQ3T8J9 2241 aa12.67□□□□□ -0.38
BRCA1-225ENST00000586385 PKD1L2Q7Z442 2459 aa12.67□□□□□ -0.38
BRCA1-225ENST00000586385 THADAQ6YHU6 1953 aa12.67□□□□□ -0.38
BRCA1-225ENST00000586385 ASPMQ8IZT6 3477 aa12.67□□□□□ -0.38
BRCA1-225ENST00000586385 SPAARA0A1B0GVQ0 90 aa12.66□□□□□ -0.38
BRCA1-225ENST00000586385 ZNF233A6NK53 670 aa12.66□□□□□ -0.38
BRCA1-225ENST00000586385 SRRM3A6NNA2 597 aaPredicted RBP12.66□□□□□ -0.38
BRCA1-225ENST00000586385 TRIM66O15016 1216 aa12.66□□□□□ -0.38
BRCA1-225ENST00000586385 TRIM24O15164 1050 aa12.66□□□□□ -0.38
BRCA1-225ENST00000586385 TGFB1I1O43294 461 aa12.66□□□□□ -0.38
BRCA1-225ENST00000586385 COCHO43405 550 aa12.66□□□□□ -0.38
BRCA1-225ENST00000586385 HYAL3O43820 417 aaPredicted RBP12.66□□□□□ -0.38
BRCA1-225ENST00000586385 TACC1O75410 805 aa12.66□□□□□ -0.38
BRCA1-225ENST00000586385 TNNC2P02585 160 aa12.66□□□□□ -0.38
BRCA1-225ENST00000586385 ADH5P11766 374 aa12.66□□□□□ -0.38
BRCA1-225ENST00000586385 ENGP17813 658 aa12.66□□□□□ -0.38
BRCA1-225ENST00000586385 PTPN1P18031 435 aaKnown RBP12.66□□□□□ -0.38
BRCA1-225ENST00000586385 ITPKAP23677 461 aa12.66□□□□□ -0.38
BRCA1-225ENST00000586385 GRIA2P42262 883 aa12.66□□□□□ -0.38
BRCA1-225ENST00000586385 MAPK8P45983 427 aa12.66□□□□□ -0.38
BRCA1-225ENST00000586385 PGFP49763 221 aa12.66□□□□□ -0.38
BRCA1-225ENST00000586385 FAM193AP78312 1265 aa12.66□□□□□ -0.38
BRCA1-225ENST00000586385 SEMA3BQ13214 749 aa12.66□□□□□ -0.38
BRCA1-225ENST00000586385 MAPRE1Q15691 268 aaKnown RBP12.66□□□□□ -0.38
BRCA1-225ENST00000586385 SLC23A3Q6PIS1 610 aa12.66□□□□□ -0.38
BRCA1-225ENST00000586385 PAQR9Q6ZVX9 377 aa12.66□□□□□ -0.38
BRCA1-225ENST00000586385 LPCAT2Q7L5N7 544 aa12.66□□□□□ -0.38
BRCA1-225ENST00000586385 SYT12Q8IV01 421 aa12.66□□□□□ -0.38
BRCA1-225ENST00000586385 WDR49Q8IV35 697 aa12.66□□□□□ -0.38
BRCA1-225ENST00000586385 WHAMMQ8TF30 809 aa12.66□□□□□ -0.38
BRCA1-225ENST00000586385 HMGB4Q8WW32 186 aa12.66□□□□□ -0.38
BRCA1-225ENST00000586385 ZNF516Q92618 1163 aa12.66□□□□□ -0.38
BRCA1-225ENST00000586385 MMS19Q96T76 1030 aa12.66□□□□□ -0.38
BRCA1-225ENST00000586385 XYLT2Q9H1B5 865 aa12.66□□□□□ -0.38
BRCA1-225ENST00000586385 ARHGEF4Q9NR80 690 aa12.66□□□□□ -0.38
BRCA1-225ENST00000586385 HSPBP1Q9NZL4 362 aa12.66□□□□□ -0.38
BRCA1-225ENST00000586385 BAHCC1Q9P281 2608 aa12.65□□□□□ -0.38
BRCA1-225ENST00000586385 TCRBV21S2A2A0A5A6 115 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms