RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 CLEC16AQ2KHT3 1053 aa14.36□□□□□ -0.11
VMP1-203ENST00000586245 NAA35Q5VZE5 725 aa14.36□□□□□ -0.11
VMP1-203ENST00000586245 PPP1R2P3Q6NXS1 205 aa14.36□□□□□ -0.11
VMP1-203ENST00000586245 PMF1Q6P1K2 205 aa14.36□□□□□ -0.11
VMP1-203ENST00000586245 SYCE2Q6PIF2 218 aa14.36□□□□□ -0.11
VMP1-203ENST00000586245 SIX6OS1Q8N1H7 587 aa14.36□□□□□ -0.11
VMP1-203ENST00000586245 WDTC1Q8N5D0 677 aa14.36□□□□□ -0.11
VMP1-203ENST00000586245 STKLD1Q8NE28 680 aa14.36□□□□□ -0.11
VMP1-203ENST00000586245 MAFAQ8NHW3 353 aaPredicted RBP14.36□□□□□ -0.11
VMP1-203ENST00000586245 IPO4Q8TEX9 1081 aaKnown RBP14.36□□□□□ -0.11
VMP1-203ENST00000586245 KCTD13Q8WZ19 329 aa14.36□□□□□ -0.11
VMP1-203ENST00000586245 HLA-CQ95604 372 aa14.36□□□□□ -0.11
VMP1-203ENST00000586245 ZNF707Q96C28 371 aaPredicted RBP14.36□□□□□ -0.11
VMP1-203ENST00000586245 CCDC42Q96M95 316 aa14.36□□□□□ -0.11
VMP1-203ENST00000586245 CORO1BQ9BR76 489 aa14.36□□□□□ -0.11
VMP1-203ENST00000586245 SYT11Q9BT88 431 aa14.36□□□□□ -0.11
VMP1-203ENST00000586245 APOL5Q9BWW9 433 aa14.36□□□□□ -0.11
VMP1-203ENST00000586245 FBXO44Q9H4M3 255 aa14.36□□□□□ -0.11
VMP1-203ENST00000586245 SYNCQ9H7C4 482 aa14.36□□□□□ -0.11
VMP1-203ENST00000586245 UBE2ZQ9H832 354 aaPredicted RBP14.36□□□□□ -0.11
VMP1-203ENST00000586245 CYLDQ9NQC7 956 aa14.36□□□□□ -0.11
VMP1-203ENST00000586245 ASAH2Q9NR71 780 aa14.36□□□□□ -0.11
VMP1-203ENST00000586245 CYTH4Q9UIA0 394 aa14.36□□□□□ -0.11
VMP1-203ENST00000586245 PAPLNO95428 1278 aa14.35□□□□□ -0.11
VMP1-203ENST00000586245 FGF19O95750 216 aa14.35□□□□□ -0.11
VMP1-203ENST00000586245 PLEKP08567 350 aaPredicted RBP14.35□□□□□ -0.11
VMP1-203ENST00000586245 LCP1P13796 627 aa14.35□□□□□ -0.11
VMP1-203ENST00000586245 LTBRP36941 435 aa14.35□□□□□ -0.11
VMP1-203ENST00000586245 EIF4A3P38919 411 aaKnown RBP14.35□□□□□ -0.11
VMP1-203ENST00000586245 NSFP46459 744 aaKnown RBP14.35□□□□□ -0.11
VMP1-203ENST00000586245 TKTL1P51854 596 aa14.35□□□□□ -0.11
VMP1-203ENST00000586245 KIF11P52732 1056 aa14.35□□□□□ -0.11
VMP1-203ENST00000586245 MAPK8IP2Q13387 824 aaPredicted RBP14.35□□□□□ -0.11
VMP1-203ENST00000586245 RAB41Q5JT25 222 aa14.35□□□□□ -0.11
VMP1-203ENST00000586245 CYP4A22Q5TCH4 519 aa14.35□□□□□ -0.11
VMP1-203ENST00000586245 PDZD4Q76G19 769 aaPredicted RBP14.35□□□□□ -0.11
VMP1-203ENST00000586245 GPRIN1Q7Z2K8 1008 aa14.35□□□□□ -0.11
VMP1-203ENST00000586245 CCDC186Q7Z3E2 898 aa14.35□□□□□ -0.11
VMP1-203ENST00000586245 GRASPQ7Z6J2 395 aaPredicted RBP14.35□□□□□ -0.11
VMP1-203ENST00000586245 GPR149Q86SP6 731 aa14.35□□□□□ -0.11
VMP1-203ENST00000586245 ERICH1Q86X53 443 aa14.35□□□□□ -0.11
VMP1-203ENST00000586245 LEMD2Q8NC56 503 aa14.35□□□□□ -0.11
VMP1-203ENST00000586245 SCAMP5Q8TAC9 235 aa14.35□□□□□ -0.11
VMP1-203ENST00000586245 CPA5Q8WXQ8 436 aa14.35□□□□□ -0.11
VMP1-203ENST00000586245 FBXO32Q969P5 355 aa14.35□□□□□ -0.11
VMP1-203ENST00000586245 TRMT2BQ96GJ1 504 aaKnown RBP14.35□□□□□ -0.11
VMP1-203ENST00000586245 MSLNLQ96KJ4 702 aa14.35□□□□□ -0.11
VMP1-203ENST00000586245 PPP1R13BQ96KQ4 1090 aa14.35□□□□□ -0.11
VMP1-203ENST00000586245 RIPOR3Q96MK2 946 aa14.35□□□□□ -0.11
VMP1-203ENST00000586245 SLITRK1Q96PX8 696 aa14.35□□□□□ -0.11
VMP1-203ENST00000586245 GCNAQ96QF7 691 aa14.35□□□□□ -0.11
VMP1-203ENST00000586245 PCDHB18PQ96TA0 734 aa14.35□□□□□ -0.11
VMP1-203ENST00000586245 CHP1Q99653 195 aa14.35□□□□□ -0.11
VMP1-203ENST00000586245 TTLL2Q9BWV7 592 aa14.35□□□□□ -0.11
VMP1-203ENST00000586245 SLC4A5Q9BY07 1137 aa14.35□□□□□ -0.11
VMP1-203ENST00000586245 MIS12Q9H081 205 aa14.35□□□□□ -0.11
VMP1-203ENST00000586245 ADAM7Q9H2U9 754 aa14.35□□□□□ -0.11
VMP1-203ENST00000586245 NHEJ1Q9H9Q4 299 aaPredicted RBP14.35□□□□□ -0.11
VMP1-203ENST00000586245 ADAMTS1Q9UHI8 967 aa14.35□□□□□ -0.11
VMP1-203ENST00000586245 CD207Q9UJ71 328 aa14.35□□□□□ -0.11
VMP1-203ENST00000586245 COG5Q9UP83 839 aa14.35□□□□□ -0.11
VMP1-203ENST00000586245 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.34□□□□□ -0.11
VMP1-203ENST00000586245 H3BQ06 376 aaPredicted RBP14.34□□□□□ -0.11
VMP1-203ENST00000586245 DDX3XO00571 662 aaKnown RBP eCLIP14.34□□□□□ -0.113e-8■■■□□ 15.8
VMP1-203ENST00000586245 ZNF197O14709 1029 aa14.34□□□□□ -0.11
VMP1-203ENST00000586245 AKR1B10O60218 316 aa14.34□□□□□ -0.11
VMP1-203ENST00000586245 FBXO21O94952 628 aa14.34□□□□□ -0.11
VMP1-203ENST00000586245 RHOP08100 348 aa14.34□□□□□ -0.11
VMP1-203ENST00000586245 UNGP13051 313 aaPredicted RBP14.34□□□□□ -0.11
VMP1-203ENST00000586245 HMGA1P17096 107 aaKnown RBP14.34□□□□□ -0.11
VMP1-203ENST00000586245 KCNA5P22460 613 aa14.34□□□□□ -0.11
VMP1-203ENST00000586245 USP46P62068 366 aa14.34□□□□□ -0.11
VMP1-203ENST00000586245 ADIGQ0VDE8 80 aa14.34□□□□□ -0.11
VMP1-203ENST00000586245 CLUL1Q15846 466 aa14.34□□□□□ -0.11
VMP1-203ENST00000586245 PTPN20Q4JDL3 420 aa14.34□□□□□ -0.11
VMP1-203ENST00000586245 PABPC1LQ4VXU2 614 aaKnown RBP14.34□□□□□ -0.11
VMP1-203ENST00000586245 ATAT1Q5SQI0 421 aa14.34□□□□□ -0.11
VMP1-203ENST00000586245 ACAD10Q6JQN1 1059 aa14.34□□□□□ -0.11
VMP1-203ENST00000586245 TMEM110Q86TL2 294 aa14.34□□□□□ -0.11
VMP1-203ENST00000586245 HS6ST3Q8IZP7 471 aa14.34□□□□□ -0.11
VMP1-203ENST00000586245 PDZD8Q8NEN9 1154 aa14.34□□□□□ -0.11
VMP1-203ENST00000586245 MYRFLQ96LU7 910 aa14.34□□□□□ -0.11
VMP1-203ENST00000586245 CPXM1Q96SM3 734 aa14.34□□□□□ -0.11
VMP1-203ENST00000586245 ULBP1Q9BZM6 244 aa14.34□□□□□ -0.11
VMP1-203ENST00000586245 S1PR5Q9H228 398 aa14.34□□□□□ -0.11
VMP1-203ENST00000586245 CNGB3Q9NQW8 809 aa14.34□□□□□ -0.11
VMP1-203ENST00000586245 HCFC1R1Q9NWW0 138 aa14.34□□□□□ -0.11
VMP1-203ENST00000586245 IL37Q9NZH6 218 aa14.34□□□□□ -0.11
VMP1-203ENST00000586245 DNMT3BQ9UBC3 853 aaKnown RBP14.34□□□□□ -0.11
VMP1-203ENST00000586245 SCML2Q9UQR0 700 aa14.34□□□□□ -0.11
VMP1-203ENST00000586245 MYH10P35580 1976 aa14.34□□□□□ -0.11
VMP1-203ENST00000586245 FAM170AA1A519 330 aa14.33□□□□□ -0.12
VMP1-203ENST00000586245 TMCO5BA8MYB1 307 aa14.33□□□□□ -0.12
VMP1-203ENST00000586245 E5RJQ4 531 aa14.33□□□□□ -0.12
VMP1-203ENST00000586245 PIK3R2O00459 728 aa14.33□□□□□ -0.12
VMP1-203ENST00000586245 SART1O43290 800 aaKnown RBP14.33□□□□□ -0.12
VMP1-203ENST00000586245 NRDCO43847 1150 aa14.33□□□□□ -0.12
VMP1-203ENST00000586245 ZBED1O96006 694 aa14.33□□□□□ -0.12
VMP1-203ENST00000586245 PTMAP06454 111 aaKnown RBP14.33□□□□□ -0.12
VMP1-203ENST00000586245 USP17L7P0C7H9 530 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms