RNA–Protein interactions for RNA: ENST00000585941.5

LIG3-205, Transcript of DNA ligase 3, humanhuman

TSL 1 (best)

Gene LIG3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-205ENST00000585941 ADAM21Q9UKJ8 722 aa14.87□□□□□ -0.03
LIG3-205ENST00000585941 FRMPD3Q5JV73 1810 aa14.87□□□□□ -0.03
LIG3-205ENST00000585941 GOLGA6CA6NDK9 693 aa14.87□□□□□ -0.03
LIG3-205ENST00000585941 MEIS3P2A8K0S8 358 aa14.87□□□□□ -0.03
LIG3-205ENST00000585941 TULP2O00295 520 aa14.87□□□□□ -0.03
LIG3-205ENST00000585941 INPPL1O15357 1258 aa14.87□□□□□ -0.03
LIG3-205ENST00000585941 ITGAVP06756 1048 aa14.87□□□□□ -0.03
LIG3-205ENST00000585941 GOLGA6DP0CG33 693 aa14.87□□□□□ -0.03
LIG3-205ENST00000585941 FLT3P36888 993 aa14.87□□□□□ -0.03
LIG3-205ENST00000585941 SCNN1GP51170 649 aa14.87□□□□□ -0.03
LIG3-205ENST00000585941 VCPP55072 806 aaKnown RBP14.87□□□□□ -0.03
LIG3-205ENST00000585941 PLCB3Q01970 1234 aa14.87□□□□□ -0.03
LIG3-205ENST00000585941 TFDP2Q14188 446 aa14.87□□□□□ -0.03
LIG3-205ENST00000585941 PDK2Q15119 407 aa14.87□□□□□ -0.03
LIG3-205ENST00000585941 UAP1Q16222 522 aaPredicted RBP14.87□□□□□ -0.03
LIG3-205ENST00000585941 ZNF618Q5T7W0 954 aa14.87□□□□□ -0.03
LIG3-205ENST00000585941 WSCD1Q658N2 575 aa14.87□□□□□ -0.03
LIG3-205ENST00000585941 GSTA5Q7RTV2 222 aa14.87□□□□□ -0.03
LIG3-205ENST00000585941 ANKS1BQ7Z6G8 1248 aa14.87□□□□□ -0.03
LIG3-205ENST00000585941 CROCCP2Q86T23 111 aa14.87□□□□□ -0.03
LIG3-205ENST00000585941 OSTM1Q86WC4 334 aa14.87□□□□□ -0.03
LIG3-205ENST00000585941 SCUBE3Q8IX30 993 aa14.87□□□□□ -0.03
LIG3-205ENST00000585941 SLC43A3Q8NBI5 491 aa14.87□□□□□ -0.03
LIG3-205ENST00000585941 FOXP3Q9BZS1 431 aa14.87□□□□□ -0.03
LIG3-205ENST00000585941 PABPC3Q9H361 631 aaKnown RBP14.87□□□□□ -0.03
LIG3-205ENST00000585941 MIOSQ9NXC5 875 aa14.87□□□□□ -0.03
LIG3-205ENST00000585941 DDX43Q9NXZ2 648 aaKnown RBP14.87□□□□□ -0.03
LIG3-205ENST00000585941 GOLGA6AQ9NYA3 693 aa14.87□□□□□ -0.03
LIG3-205ENST00000585941 ZNF148Q9UQR1 794 aa14.87□□□□□ -0.03
LIG3-205ENST00000585941 NEU2Q9Y3R4 380 aa14.87□□□□□ -0.03
LIG3-205ENST00000585941 ZNF487B1APH4 448 aa14.86□□□□□ -0.03
LIG3-205ENST00000585941 MGEA5O60502 916 aa14.86□□□□□ -0.03
LIG3-205ENST00000585941 ENDOD1O94919 500 aa14.86□□□□□ -0.03
LIG3-205ENST00000585941 EOMESO95936 686 aa14.86□□□□□ -0.03
LIG3-205ENST00000585941 ODC1P11926 461 aa14.86□□□□□ -0.03
LIG3-205ENST00000585941 NPR3P17342 541 aa14.86□□□□□ -0.03
LIG3-205ENST00000585941 PCSK1P29120 753 aa14.86□□□□□ -0.03
LIG3-205ENST00000585941 ADCY8P40145 1251 aa14.86□□□□□ -0.03
LIG3-205ENST00000585941 CLCNKBP51801 687 aa14.86□□□□□ -0.03
LIG3-205ENST00000585941 PMS2P54278 862 aa14.86□□□□□ -0.03
LIG3-205ENST00000585941 UPP1Q16831 310 aa14.86□□□□□ -0.03
LIG3-205ENST00000585941 SMTNL2Q2TAL5 461 aa14.86□□□□□ -0.03
LIG3-205ENST00000585941 CCDC14Q49A88 953 aa14.86□□□□□ -0.03
LIG3-205ENST00000585941 LHX8Q68G74 356 aa14.86□□□□□ -0.03
LIG3-205ENST00000585941 FAM76AQ8TAV0 307 aa14.86□□□□□ -0.03
LIG3-205ENST00000585941 RIN2Q8WYP3 895 aaPredicted RBP14.86□□□□□ -0.03
LIG3-205ENST00000585941 KCTD13Q8WZ19 329 aa14.86□□□□□ -0.03
LIG3-205ENST00000585941 KHSRPQ92945 711 aaKnown RBP eCLIP14.86□□□□□ -0.03
LIG3-205ENST00000585941 FAM204AQ9H8W3 233 aa14.86□□□□□ -0.03
LIG3-205ENST00000585941 PCSK1NQ9UHG2 260 aa14.86□□□□□ -0.03
LIG3-205ENST00000585941 DSEQ9UL01 958 aa14.86□□□□□ -0.03
LIG3-205ENST00000585941 CDH9Q9ULB4 789 aa14.86□□□□□ -0.03
LIG3-205ENST00000585941 ATP8A1Q9Y2Q0 1164 aa14.86□□□□□ -0.03
LIG3-205ENST00000585941 HMGB1P1B2RPK0 211 aaPredicted RBP14.85□□□□□ -0.03
LIG3-205ENST00000585941 PIK3R2O00459 728 aa14.85□□□□□ -0.03
LIG3-205ENST00000585941 KRT14P02533 472 aa14.85□□□□□ -0.03
LIG3-205ENST00000585941 CKBP12277 381 aa14.85□□□□□ -0.03
LIG3-205ENST00000585941 RARGP13631 454 aa14.85□□□□□ -0.03
LIG3-205ENST00000585941 IVDP26440 423 aa14.85□□□□□ -0.03
LIG3-205ENST00000585941 GRK4P32298 578 aa14.85□□□□□ -0.03
LIG3-205ENST00000585941 RDXP35241 583 aaKnown RBP14.85□□□□□ -0.03
LIG3-205ENST00000585941 TUSC3Q13454 348 aa14.85□□□□□ -0.03
LIG3-205ENST00000585941 KCNT1Q5JUK3 1230 aa14.85□□□□□ -0.03
LIG3-205ENST00000585941 TRNP1Q6NT89 227 aa14.85□□□□□ -0.03
LIG3-205ENST00000585941 METTL23Q86XA0 190 aa14.85□□□□□ -0.03
LIG3-205ENST00000585941 ECHDC2Q86YB7 292 aa14.85□□□□□ -0.03
LIG3-205ENST00000585941 FUKQ8N0W3 1084 aa14.85□□□□□ -0.03
LIG3-205ENST00000585941 ALLCQ8N6M5 410 aa14.85□□□□□ -0.03
LIG3-205ENST00000585941 SLC35B2Q8TB61 432 aa14.85□□□□□ -0.03
LIG3-205ENST00000585941 PIWIL1Q96J94 861 aaKnown RBP14.85□□□□□ -0.03
LIG3-205ENST00000585941 MAK16Q9BXY0 300 aaKnown RBP14.85□□□□□ -0.03
LIG3-205ENST00000585941 STARD7Q9NQZ5 370 aa14.85□□□□□ -0.03
LIG3-205ENST00000585941 SAGE1Q9NXZ1 904 aa14.85□□□□□ -0.03
LIG3-205ENST00000585941 DNPEPQ9ULA0 475 aa14.85□□□□□ -0.03
LIG3-205ENST00000585941 PTCH2Q9Y6C5 1203 aa14.85□□□□□ -0.03
LIG3-205ENST00000585941 A0A1W2PQ45 241 aaPredicted RBP14.84□□□□□ -0.03
LIG3-205ENST00000585941 A0A1W2PQY0 241 aa14.84□□□□□ -0.03
LIG3-205ENST00000585941 A6NNZ2 444 aa14.84□□□□□ -0.03
LIG3-205ENST00000585941 H0YGN5 161 aa14.84□□□□□ -0.03
LIG3-205ENST00000585941 APOC4-APOC2K7ER74 178 aa14.84□□□□□ -0.03
LIG3-205ENST00000585941 MDM4O15151 490 aa14.84□□□□□ -0.03
LIG3-205ENST00000585941 HCRTO43612 131 aa14.84□□□□□ -0.03
LIG3-205ENST00000585941 CST8O60676 142 aa14.84□□□□□ -0.03
LIG3-205ENST00000585941 GABBR2O75899 941 aa14.84□□□□□ -0.03
LIG3-205ENST00000585941 APOC2P02655 101 aa14.84□□□□□ -0.03
LIG3-205ENST00000585941 CYP11A1P05108 521 aa14.84□□□□□ -0.03
LIG3-205ENST00000585941 NUDT17P0C025 328 aa14.84□□□□□ -0.03
LIG3-205ENST00000585941 MYZAPP0CAP1 466 aa14.84□□□□□ -0.03
LIG3-205ENST00000585941 FAM200BP0CF97 657 aa14.84□□□□□ -0.03
LIG3-205ENST00000585941 KLRC2P26717 231 aa14.84□□□□□ -0.03
LIG3-205ENST00000585941 ADCY2Q08462 1091 aa14.84□□□□□ -0.03
LIG3-205ENST00000585941 OASLQ15646 514 aaKnown RBP14.84□□□□□ -0.03
LIG3-205ENST00000585941 TUBB8Q3ZCM7 444 aa14.84□□□□□ -0.03
LIG3-205ENST00000585941 TRMT10CQ7L0Y3 403 aaKnown RBP14.84□□□□□ -0.03
LIG3-205ENST00000585941 ZNF598Q86UK7 904 aaKnown RBP14.84□□□□□ -0.03
LIG3-205ENST00000585941 RNF169Q8NCN4 708 aa14.84□□□□□ -0.03
LIG3-205ENST00000585941 FAM172AQ8WUF8 416 aa14.84□□□□□ -0.03
LIG3-205ENST00000585941 HSPH1Q92598 858 aa14.84□□□□□ -0.03
LIG3-205ENST00000585941 CENPIQ92674 756 aaPredicted RBP14.84□□□□□ -0.03
LIG3-205ENST00000585941 ACSF2Q96CM8 615 aaPredicted RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms