RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 KRT35Q92764 455 aa10.93□□□□□ -0.66
LIG3-203ENST00000585370 APBB2Q92870 758 aa10.93□□□□□ -0.66
LIG3-203ENST00000585370 RBM41Q96IZ5 413 aaKnown RBP10.93□□□□□ -0.66
LIG3-203ENST00000585370 SENP8Q96LD8 212 aa10.93□□□□□ -0.66
LIG3-203ENST00000585370 CPXM1Q96SM3 734 aa10.93□□□□□ -0.66
LIG3-203ENST00000585370 YME1L1Q96TA2 773 aa10.93□□□□□ -0.66
LIG3-203ENST00000585370 HNRNPABQ99729 332 aaKnown RBP10.93□□□□□ -0.66
LIG3-203ENST00000585370 C1QTNF1Q9BXJ1 281 aa10.93□□□□□ -0.66
LIG3-203ENST00000585370 EPC1Q9H2F5 836 aa10.93□□□□□ -0.66
LIG3-203ENST00000585370 UBE2ZQ9H832 354 aaPredicted RBP10.93□□□□□ -0.66
LIG3-203ENST00000585370 CD320Q9NPF0 282 aa10.93□□□□□ -0.66
LIG3-203ENST00000585370 ASNSD1Q9NWL6 643 aa10.93□□□□□ -0.66
LIG3-203ENST00000585370 EHD2Q9NZN4 543 aa10.93□□□□□ -0.66
LIG3-203ENST00000585370 PDCD11Q14690 1871 aaKnown RBP10.93□□□□□ -0.66
LIG3-203ENST00000585370 TRIP11Q15643 1979 aa10.92□□□□□ -0.66
LIG3-203ENST00000585370 H3BNC9 293 aa10.92□□□□□ -0.66
LIG3-203ENST00000585370 RNF8O76064 485 aa10.92□□□□□ -0.66
LIG3-203ENST00000585370 ERBB2P04626 1255 aa10.92□□□□□ -0.66
LIG3-203ENST00000585370 KRT7P08729 469 aa10.92□□□□□ -0.66
LIG3-203ENST00000585370 PYGMP11217 842 aa10.92□□□□□ -0.66
LIG3-203ENST00000585370 ODC1P11926 461 aa10.92□□□□□ -0.66
LIG3-203ENST00000585370 PTPN1P18031 435 aaKnown RBP10.92□□□□□ -0.66
LIG3-203ENST00000585370 PCSK1P29120 753 aa10.92□□□□□ -0.66
LIG3-203ENST00000585370 GBP1P32455 592 aa10.92□□□□□ -0.66
LIG3-203ENST00000585370 SCNN1GP51170 649 aa10.92□□□□□ -0.66
LIG3-203ENST00000585370 RPL7AP62424 266 aaKnown RBP10.92□□□□□ -0.66
LIG3-203ENST00000585370 CUL1Q13616 776 aa10.92□□□□□ -0.66
LIG3-203ENST00000585370 CYP1B1Q16678 543 aa10.92□□□□□ -0.66
LIG3-203ENST00000585370 PTPROQ16827 1216 aa10.92□□□□□ -0.66
LIG3-203ENST00000585370 UPP1Q16831 310 aa10.92□□□□□ -0.66
LIG3-203ENST00000585370 C2CD6Q53TS8 623 aa10.92□□□□□ -0.66
LIG3-203ENST00000585370 ODF2Q5BJF6 829 aa10.92□□□□□ -0.66
LIG3-203ENST00000585370 BEND6Q5SZJ8 279 aaPredicted RBP10.92□□□□□ -0.66
LIG3-203ENST00000585370 GLB1LQ6UWU2 654 aa10.92□□□□□ -0.66
LIG3-203ENST00000585370 PHLDB2Q86SQ0 1253 aa10.92□□□□□ -0.66
LIG3-203ENST00000585370 KLHL7Q8IXQ5 586 aa10.92□□□□□ -0.66
LIG3-203ENST00000585370 TMEM130Q8N3G9 435 aa10.92□□□□□ -0.66
LIG3-203ENST00000585370 B3GALNT2Q8NCR0 500 aa10.92□□□□□ -0.66
LIG3-203ENST00000585370 UBA3Q8TBC4 463 aa10.92□□□□□ -0.66
LIG3-203ENST00000585370 URGCPQ8TCY9 931 aa10.92□□□□□ -0.66
LIG3-203ENST00000585370 LPPQ93052 612 aa10.92□□□□□ -0.66
LIG3-203ENST00000585370 MRPL38Q96DV4 380 aaKnown RBP10.92□□□□□ -0.66
LIG3-203ENST00000585370 MCEEQ96PE7 176 aa10.92□□□□□ -0.66
LIG3-203ENST00000585370 UBXN6Q9BZV1 441 aa10.92□□□□□ -0.66
LIG3-203ENST00000585370 RAB17Q9H0T7 212 aa10.92□□□□□ -0.66
LIG3-203ENST00000585370 ACBD3Q9H3P7 528 aa10.92□□□□□ -0.66
LIG3-203ENST00000585370 GDF3Q9NR23 364 aa10.92□□□□□ -0.66
LIG3-203ENST00000585370 ST7Q9NRC1 585 aa10.92□□□□□ -0.66
LIG3-203ENST00000585370 MIOSQ9NXC5 875 aa10.92□□□□□ -0.66
LIG3-203ENST00000585370 SMARCAL1Q9NZC9 954 aa10.92□□□□□ -0.66
LIG3-203ENST00000585370 CYTH4Q9UIA0 394 aa10.92□□□□□ -0.66
LIG3-203ENST00000585370 RASAL2Q9UJF2 1139 aa10.92□□□□□ -0.66
LIG3-203ENST00000585370 CDH9Q9ULB4 789 aa10.92□□□□□ -0.66
LIG3-203ENST00000585370 EFR3BQ9Y2G0 817 aa10.92□□□□□ -0.66
LIG3-203ENST00000585370 WDFY4Q6ZS81 3184 aa10.92□□□□□ -0.66
LIG3-203ENST00000585370 SCN1AP35498 2009 aa10.91□□□□□ -0.66
LIG3-203ENST00000585370 GOLGA8SH3BPF8 625 aa10.91□□□□□ -0.66
LIG3-203ENST00000585370 XPO1O14980 1071 aaKnown RBP10.91□□□□□ -0.66
LIG3-203ENST00000585370 HOXA2O43364 376 aa10.91□□□□□ -0.66
LIG3-203ENST00000585370 PHF2O75151 1096 aa10.91□□□□□ -0.66
LIG3-203ENST00000585370 HEXIM1O94992 359 aaKnown RBP10.91□□□□□ -0.66
LIG3-203ENST00000585370 CYP11A1P05108 521 aa10.91□□□□□ -0.66
LIG3-203ENST00000585370 PDGFRBP09619 1106 aa10.91□□□□□ -0.66
LIG3-203ENST00000585370 LINC00271P0C7V0 271 aa10.91□□□□□ -0.66
LIG3-203ENST00000585370 FGFR1P11362 822 aa10.91□□□□□ -0.66
LIG3-203ENST00000585370 TYMPP19971 482 aa10.91□□□□□ -0.66
LIG3-203ENST00000585370 KCNA5P22460 613 aa10.91□□□□□ -0.66
LIG3-203ENST00000585370 PSMA2P25787 234 aa10.91□□□□□ -0.66
LIG3-203ENST00000585370 PTPN7P35236 360 aa10.91□□□□□ -0.66
LIG3-203ENST00000585370 RFC1P35251 1148 aaPredicted RBP10.91□□□□□ -0.66
LIG3-203ENST00000585370 PCK1P35558 622 aa10.91□□□□□ -0.66
LIG3-203ENST00000585370 SSR1P43307 286 aaKnown RBP10.91□□□□□ -0.66
LIG3-203ENST00000585370 FNTAP49354 379 aa10.91□□□□□ -0.66
LIG3-203ENST00000585370 CLCNKBP51801 687 aa10.91□□□□□ -0.66
LIG3-203ENST00000585370 ZNF143P52747 638 aaPredicted RBP10.91□□□□□ -0.66
LIG3-203ENST00000585370 DRG2P55039 364 aaKnown RBP10.91□□□□□ -0.66
LIG3-203ENST00000585370 SLC6A3Q01959 620 aa10.91□□□□□ -0.66
LIG3-203ENST00000585370 PLCB3Q01970 1234 aa10.91□□□□□ -0.66
LIG3-203ENST00000585370 ZNF211Q13398 564 aaPredicted RBP10.91□□□□□ -0.66
LIG3-203ENST00000585370 ORC1Q13415 861 aa10.91□□□□□ -0.66
LIG3-203ENST00000585370 NNTQ13423 1086 aa10.91□□□□□ -0.66
LIG3-203ENST00000585370 GPM6BQ13491 265 aa10.91□□□□□ -0.66
LIG3-203ENST00000585370 LEXMQ3ZCV2 418 aa10.91□□□□□ -0.66
LIG3-203ENST00000585370 CYP4A22Q5TCH4 519 aa10.91□□□□□ -0.66
LIG3-203ENST00000585370 WSCD1Q658N2 575 aa10.91□□□□□ -0.66
LIG3-203ENST00000585370 OR6B2Q6IFH4 312 aa10.91□□□□□ -0.66
LIG3-203ENST00000585370 EMBQ6PCB8 327 aa10.91□□□□□ -0.66
LIG3-203ENST00000585370 C12orf29Q8N999 325 aa10.91□□□□□ -0.66
LIG3-203ENST00000585370 C12orf50Q8NA57 414 aaPredicted RBP10.91□□□□□ -0.66
LIG3-203ENST00000585370 MAGOHBQ96A72 148 aaKnown RBP10.91□□□□□ -0.66
LIG3-203ENST00000585370 SAMD11Q96NU1 681 aa10.91□□□□□ -0.66
LIG3-203ENST00000585370 CNPY3Q9BT09 278 aa10.91□□□□□ -0.66
LIG3-203ENST00000585370 LRFN3Q9BTN0 628 aa10.91□□□□□ -0.66
LIG3-203ENST00000585370 AP1M1Q9BXS5 423 aa10.91□□□□□ -0.66
LIG3-203ENST00000585370 DUSP16Q9BY84 665 aa10.91□□□□□ -0.66
LIG3-203ENST00000585370 FAM129AQ9BZQ8 928 aa10.91□□□□□ -0.66
LIG3-203ENST00000585370 TRIM7Q9C029 511 aa10.91□□□□□ -0.66
LIG3-203ENST00000585370 LRRC19Q9H756 370 aa10.91□□□□□ -0.66
LIG3-203ENST00000585370 GOLGA2P5Q9HBQ8 144 aa10.91□□□□□ -0.66
LIG3-203ENST00000585370 TMEM161AQ9NX61 479 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms