RNA–Protein interactions for RNA: ENST00000585058.1

RAB11FIP4-210, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 2

Gene RAB11FIP4, Length 5,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-210ENST00000585058 ALDH1A2O94788 518 aa13.72□□□□□ -0.21
RAB11FIP4-210ENST00000585058 LRRC6Q86X45 466 aa13.72□□□□□ -0.21
RAB11FIP4-210ENST00000585058 ATP6V0D2Q8N8Y2 350 aa13.72□□□□□ -0.21
RAB11FIP4-210ENST00000585058 RIT2Q99578 217 aa13.72□□□□□ -0.21
RAB11FIP4-210ENST00000585058 FRMD8Q9BZ67 464 aaPredicted RBP13.72□□□□□ -0.21
RAB11FIP4-210ENST00000585058 PDP2Q9P2J9 529 aa13.72□□□□□ -0.21
RAB11FIP4-210ENST00000585058 DCDC2Q9UHG0 476 aa13.72□□□□□ -0.21
RAB11FIP4-210ENST00000585058 TBX20Q9UMR3 447 aa13.72□□□□□ -0.21
RAB11FIP4-210ENST00000585058 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.72□□□□□ -0.21
RAB11FIP4-210ENST00000585058 IQCA1LA6NCM1 817 aa13.72□□□□□ -0.21
RAB11FIP4-210ENST00000585058 PPP1R3GB7ZBB8 358 aa13.72□□□□□ -0.21
RAB11FIP4-210ENST00000585058 PSTPIP1O43586 416 aa13.72□□□□□ -0.21
RAB11FIP4-210ENST00000585058 SGPL1O95470 568 aa13.72□□□□□ -0.21
RAB11FIP4-210ENST00000585058 ZCCHC18P0CG32 403 aa13.72□□□□□ -0.21
RAB11FIP4-210ENST00000585058 THRAP10827 490 aa13.72□□□□□ -0.21
RAB11FIP4-210ENST00000585058 RASA1P20936 1047 aa13.72□□□□□ -0.21
RAB11FIP4-210ENST00000585058 GPC1P35052 558 aa13.72□□□□□ -0.21
RAB11FIP4-210ENST00000585058 ZNF177Q13360 481 aaPredicted RBP13.72□□□□□ -0.21
RAB11FIP4-210ENST00000585058 SNAPC2Q13487 334 aa13.72□□□□□ -0.21
RAB11FIP4-210ENST00000585058 DPP3Q9NY33 737 aa13.72□□□□□ -0.21
RAB11FIP4-210ENST00000585058 ZNF70Q9UC06 446 aaPredicted RBP13.72□□□□□ -0.21
RAB11FIP4-210ENST00000585058 RIMBP3CA6NJZ7 1639 aa13.72□□□□□ -0.21
RAB11FIP4-210ENST00000585058 RIMBP3BA6NNM3 1639 aa13.72□□□□□ -0.21
RAB11FIP4-210ENST00000585058 RIMBP3Q9UFD9 1639 aa13.72□□□□□ -0.21
RAB11FIP4-210ENST00000585058 AFF2P51816 1311 aa13.72□□□□□ -0.21
RAB11FIP4-210ENST00000585058 RRM2P31350 389 aa13.72□□□□□ -0.21
RAB11FIP4-210ENST00000585058 STIP1P31948 543 aaKnown RBP13.72□□□□□ -0.21
RAB11FIP4-210ENST00000585058 SOX6P35712 828 aa13.72□□□□□ -0.21
RAB11FIP4-210ENST00000585058 SERPINB8P50452 374 aa13.72□□□□□ -0.21
RAB11FIP4-210ENST00000585058 CHRNB3Q05901 458 aa13.72□□□□□ -0.21
RAB11FIP4-210ENST00000585058 SLC44A4Q53GD3 710 aa13.72□□□□□ -0.21
RAB11FIP4-210ENST00000585058 VN1R5Q7Z5H4 357 aa13.72□□□□□ -0.21
RAB11FIP4-210ENST00000585058 HIC2Q96JB3 615 aa13.72□□□□□ -0.21
RAB11FIP4-210ENST00000585058 IARS2Q9NSE4 1012 aaKnown RBP13.72□□□□□ -0.21
RAB11FIP4-210ENST00000585058 GTF3C4Q9UKN8 822 aa13.72□□□□□ -0.21
RAB11FIP4-210ENST00000585058 HPS5Q9UPZ3 1129 aa13.72□□□□□ -0.21
RAB11FIP4-210ENST00000585058 AP4S1Q9Y587 144 aa13.72□□□□□ -0.21
RAB11FIP4-210ENST00000585058 CNTNAP5Q8WYK1 1306 aa13.72□□□□□ -0.21
RAB11FIP4-210ENST00000585058 HBP1O60381 514 aa13.72□□□□□ -0.21
RAB11FIP4-210ENST00000585058 PSMC3P17980 439 aa13.72□□□□□ -0.21
RAB11FIP4-210ENST00000585058 FXR2P51116 673 aaKnown RBP eCLIP13.72□□□□□ -0.21
RAB11FIP4-210ENST00000585058 MMRN1Q13201 1228 aa13.72□□□□□ -0.21
RAB11FIP4-210ENST00000585058 PABPC3Q9H361 631 aaKnown RBP13.72□□□□□ -0.21
RAB11FIP4-210ENST00000585058 RMND5AQ9H871 391 aa13.72□□□□□ -0.21
RAB11FIP4-210ENST00000585058 AGPAT3Q9NRZ7 376 aa13.72□□□□□ -0.21
RAB11FIP4-210ENST00000585058 KDM6AO15550 1401 aaPredicted RBP13.71□□□□□ -0.21
RAB11FIP4-210ENST00000585058 EFCAB1Q9HAE3 211 aa13.71□□□□□ -0.21
RAB11FIP4-210ENST00000585058 VPS26AO75436 327 aa13.71□□□□□ -0.21
RAB11FIP4-210ENST00000585058 NQO1P15559 274 aaKnown RBP13.71□□□□□ -0.21
RAB11FIP4-210ENST00000585058 ATP6V1B2P21281 511 aa13.71□□□□□ -0.21
RAB11FIP4-210ENST00000585058 ANTXR2P58335 489 aa13.71□□□□□ -0.21
RAB11FIP4-210ENST00000585058 NFYCQ13952 458 aa13.71□□□□□ -0.21
RAB11FIP4-210ENST00000585058 KDM7AQ6ZMT4 941 aa13.71□□□□□ -0.21
RAB11FIP4-210ENST00000585058 DEPDC7Q96QD5 511 aa13.71□□□□□ -0.21
RAB11FIP4-210ENST00000585058 PARK7Q99497 189 aaKnown RBP13.71□□□□□ -0.21
RAB11FIP4-210ENST00000585058 NDEL1Q9GZM8 345 aa13.71□□□□□ -0.21
RAB11FIP4-210ENST00000585058 CARD9Q9H257 536 aa13.71□□□□□ -0.21
RAB11FIP4-210ENST00000585058 MTIF3Q9H2K0 278 aaKnown RBP13.71□□□□□ -0.21
RAB11FIP4-210ENST00000585058 RNPEPQ9H4A4 650 aa13.71□□□□□ -0.21
RAB11FIP4-210ENST00000585058 PCDHB7Q9Y5E2 793 aa13.71□□□□□ -0.21
RAB11FIP4-210ENST00000585058 NUP107P57740 925 aa13.71□□□□□ -0.21
RAB11FIP4-210ENST00000585058 DGKDQ16760 1214 aa13.71□□□□□ -0.21
RAB11FIP4-210ENST00000585058 BNC2Q6ZN30 1099 aaPredicted RBP13.71□□□□□ -0.21
RAB11FIP4-210ENST00000585058 HEATR4Q86WZ0 1026 aa13.71□□□□□ -0.21
RAB11FIP4-210ENST00000585058 NR5A2O00482 541 aa13.71□□□□□ -0.22
RAB11FIP4-210ENST00000585058 PDE5AO76074 875 aa13.71□□□□□ -0.22
RAB11FIP4-210ENST00000585058 ASS1P00966 412 aaKnown RBP13.71□□□□□ -0.22
RAB11FIP4-210ENST00000585058 ACO1P21399 889 aaKnown RBP13.71□□□□□ -0.22
RAB11FIP4-210ENST00000585058 PNPLA4P41247 253 aa13.71□□□□□ -0.22
RAB11FIP4-210ENST00000585058 CORO7P57737 925 aa13.71□□□□□ -0.22
RAB11FIP4-210ENST00000585058 SCUBE1Q8IWY4 988 aa13.71□□□□□ -0.22
RAB11FIP4-210ENST00000585058 CPSF4O95639 269 aaKnown RBP13.7□□□□□ -0.22
RAB11FIP4-210ENST00000585058 TCF7P36402 384 aaPredicted RBP13.7□□□□□ -0.22
RAB11FIP4-210ENST00000585058 USP39Q53GS9 565 aaKnown RBP13.7□□□□□ -0.22
RAB11FIP4-210ENST00000585058 ANKRD49Q8WVL7 239 aa13.7□□□□□ -0.22
RAB11FIP4-210ENST00000585058 VMP1Q96GC9 406 aa13.7□□□□□ -0.22
RAB11FIP4-210ENST00000585058 MAGEB18Q96M61 343 aa13.7□□□□□ -0.22
RAB11FIP4-210ENST00000585058 ERGIC2Q96RQ1 377 aa13.7□□□□□ -0.22
RAB11FIP4-210ENST00000585058 TMEM106CQ9BVX2 250 aa13.7□□□□□ -0.22
RAB11FIP4-210ENST00000585058 EPB41L4AQ9HCS5 686 aaPredicted RBP13.7□□□□□ -0.22
RAB11FIP4-210ENST00000585058 NMRK1Q9NWW6 199 aa13.7□□□□□ -0.22
RAB11FIP4-210ENST00000585058 TMCC3Q9ULS5 477 aa13.7□□□□□ -0.22
RAB11FIP4-210ENST00000585058 A0A0G2JLW4 131 aa13.7□□□□□ -0.22
RAB11FIP4-210ENST00000585058 ZNF682O95780 498 aa13.7□□□□□ -0.22
RAB11FIP4-210ENST00000585058 ODC1P11926 461 aa13.7□□□□□ -0.22
RAB11FIP4-210ENST00000585058 PBLDP30039 288 aaPredicted RBP13.7□□□□□ -0.22
RAB11FIP4-210ENST00000585058 SLC11A2P49281 568 aa13.7□□□□□ -0.22
RAB11FIP4-210ENST00000585058 SARSP49591 514 aaKnown RBP13.7□□□□□ -0.22
RAB11FIP4-210ENST00000585058 KPNB1Q14974 876 aaKnown RBP13.7□□□□□ -0.22
RAB11FIP4-210ENST00000585058 FAR2Q96K12 515 aa13.7□□□□□ -0.22
RAB11FIP4-210ENST00000585058 RUSC1Q9BVN2 902 aa13.7□□□□□ -0.22
RAB11FIP4-210ENST00000585058 KRCC1Q9NPI7 259 aaPredicted RBP13.7□□□□□ -0.22
RAB11FIP4-210ENST00000585058 GPATCH2LQ9NWQ4 482 aa13.7□□□□□ -0.22
RAB11FIP4-210ENST00000585058 OVOS2A0A0G2JMS6 1433 aa13.7□□□□□ -0.22
RAB11FIP4-210ENST00000585058 OVOS2A0A0J9YW53 1432 aa13.7□□□□□ -0.22
RAB11FIP4-210ENST00000585058 OVOS2Q6IE36 1432 aa13.7□□□□□ -0.22
RAB11FIP4-210ENST00000585058 AP1G2O75843 785 aa13.7□□□□□ -0.22
RAB11FIP4-210ENST00000585058 ANGEL2Q5VTE6 544 aaKnown RBP13.7□□□□□ -0.22
RAB11FIP4-210ENST00000585058 MIB1Q86YT6 1006 aa13.7□□□□□ -0.22
RAB11FIP4-210ENST00000585058 SLC25A13Q9UJS0 675 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms