RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 PPP1R2P41236 205 aa6.08□□□□□ -1.44
CDH8-213ENST00000584966 LIG3P49916 1009 aa6.08□□□□□ -1.44
CDH8-213ENST00000584966 CLCNKBP51801 687 aa6.08□□□□□ -1.44
CDH8-213ENST00000584966 YARSP54577 528 aaKnown RBP6.08□□□□□ -1.44
CDH8-213ENST00000584966 STX17P56962 302 aa6.08□□□□□ -1.44
CDH8-213ENST00000584966 FKBP3Q00688 224 aaKnown RBP6.08□□□□□ -1.44
CDH8-213ENST00000584966 LRRC63Q05C16 580 aa6.08□□□□□ -1.44
CDH8-213ENST00000584966 ENPEPQ07075 957 aa6.08□□□□□ -1.44
CDH8-213ENST00000584966 NCAPHQ15003 741 aa6.08□□□□□ -1.44
CDH8-213ENST00000584966 CT47A1Q5JQC4 288 aaPredicted RBP6.08□□□□□ -1.44
CDH8-213ENST00000584966 KLHL10Q6JEL2 608 aa6.08□□□□□ -1.44
CDH8-213ENST00000584966 C15orf39Q6ZRI6 1047 aa6.08□□□□□ -1.44
CDH8-213ENST00000584966 C11orf57Q6ZUT1 292 aaPredicted RBP6.08□□□□□ -1.44
CDH8-213ENST00000584966 FILIP1Q7Z7B0 1213 aa6.08□□□□□ -1.44
CDH8-213ENST00000584966 TMEM102Q8N9M5 508 aaPredicted RBP6.08□□□□□ -1.44
CDH8-213ENST00000584966 PHC3Q8NDX5 983 aa6.08□□□□□ -1.44
CDH8-213ENST00000584966 OR5B17Q8NGF7 314 aa6.08□□□□□ -1.44
CDH8-213ENST00000584966 URGCPQ8TCY9 931 aa6.08□□□□□ -1.44
CDH8-213ENST00000584966 NXPE3Q969Y0 559 aa6.08□□□□□ -1.44
CDH8-213ENST00000584966 EEF2KMTQ96G04 330 aa6.08□□□□□ -1.44
CDH8-213ENST00000584966 IGSF21Q96ID5 467 aa6.08□□□□□ -1.44
CDH8-213ENST00000584966 EAF1Q96JC9 268 aaPredicted RBP6.08□□□□□ -1.44
CDH8-213ENST00000584966 GUCD1Q96NT3 240 aa6.08□□□□□ -1.44
CDH8-213ENST00000584966 SAMD11Q96NU1 681 aa6.08□□□□□ -1.44
CDH8-213ENST00000584966 HHIPQ96QV1 700 aa6.08□□□□□ -1.44
CDH8-213ENST00000584966 CEP44Q9C0F1 390 aa6.08□□□□□ -1.44
CDH8-213ENST00000584966 HSD3B7Q9H2F3 369 aa6.08□□□□□ -1.44
CDH8-213ENST00000584966 SLC28A3Q9HAS3 691 aa6.08□□□□□ -1.44
CDH8-213ENST00000584966 KIAA1586Q9HCI6 787 aa6.08□□□□□ -1.44
CDH8-213ENST00000584966 ALG13Q9NP73 1137 aaKnown RBP6.08□□□□□ -1.44
CDH8-213ENST00000584966 TOPORSQ9NS56 1045 aaPredicted RBP6.08□□□□□ -1.44
CDH8-213ENST00000584966 INTS13Q9NVM9 706 aa6.08□□□□□ -1.44
CDH8-213ENST00000584966 RBAKQ9NYW8 714 aaPredicted RBP6.08□□□□□ -1.44
CDH8-213ENST00000584966 SIX4Q9UIU6 781 aa6.08□□□□□ -1.44
CDH8-213ENST00000584966 RWDD2AQ9UIY3 292 aa6.08□□□□□ -1.44
CDH8-213ENST00000584966 CTNND2Q9UQB3 1225 aa6.08□□□□□ -1.44
CDH8-213ENST00000584966 FAN1Q9Y2M0 1017 aa6.08□□□□□ -1.44
CDH8-213ENST00000584966 C2CD2Q9Y426 696 aa6.08□□□□□ -1.44
CDH8-213ENST00000584966 TRIOO75962 3097 aa6.08□□□□□ -1.44
CDH8-213ENST00000584966 ANAPC1Q9H1A4 1944 aa6.07□□□□□ -1.44
CDH8-213ENST00000584966 OBSL1O75147 1896 aa6.07□□□□□ -1.44
CDH8-213ENST00000584966 A0A0C4DFX4 3053 aa6.07□□□□□ -1.44
CDH8-213ENST00000584966 LRRIQ3A6PVS8 624 aaPredicted RBP6.07□□□□□ -1.44
CDH8-213ENST00000584966 METTL12A8MUP2 240 aa6.07□□□□□ -1.44
CDH8-213ENST00000584966 PSMA7O14818 248 aa6.07□□□□□ -1.44
CDH8-213ENST00000584966 CETN3O15182 167 aa6.07□□□□□ -1.44
CDH8-213ENST00000584966 EXOC3O60645 756 aa6.07□□□□□ -1.44
CDH8-213ENST00000584966 ZC3H11AO75152 810 aaKnown RBP eCLIP6.07□□□□□ -1.44
CDH8-213ENST00000584966 LRRN2O75325 713 aa6.07□□□□□ -1.44
CDH8-213ENST00000584966 FGF18O76093 207 aa6.07□□□□□ -1.44
CDH8-213ENST00000584966 STK10O94804 968 aaKnown RBP6.07□□□□□ -1.44
CDH8-213ENST00000584966 VNN1O95497 513 aa6.07□□□□□ -1.44
CDH8-213ENST00000584966 RPL13P26373 211 aaKnown RBP6.07□□□□□ -1.44
CDH8-213ENST00000584966 RPL9P32969 192 aaKnown RBP6.07□□□□□ -1.44
CDH8-213ENST00000584966 CTNNB1P35222 781 aa6.07□□□□□ -1.44
CDH8-213ENST00000584966 PSMC2P35998 433 aaKnown RBP6.07□□□□□ -1.44
CDH8-213ENST00000584966 OR1G1P47890 313 aa6.07□□□□□ -1.44
CDH8-213ENST00000584966 AARSP49588 968 aaKnown RBP eCLIP6.07□□□□□ -1.44
CDH8-213ENST00000584966 ERVFC1P60507 584 aa6.07□□□□□ -1.44
CDH8-213ENST00000584966 PPP2R3AQ06190 1150 aa6.07□□□□□ -1.44
CDH8-213ENST00000584966 PPP3CAQ08209 521 aa6.07□□□□□ -1.44
CDH8-213ENST00000584966 PAK1Q13153 545 aa6.07□□□□□ -1.44
CDH8-213ENST00000584966 GPM6BQ13491 265 aa6.07□□□□□ -1.44
CDH8-213ENST00000584966 HSP90AA2PQ14568 343 aaPredicted RBP6.07□□□□□ -1.44
CDH8-213ENST00000584966 TMEM132DQ14C87 1099 aa6.07□□□□□ -1.44
CDH8-213ENST00000584966 SURF1Q15526 300 aa6.07□□□□□ -1.44
CDH8-213ENST00000584966 SPRED3Q2MJR0 410 aa6.07□□□□□ -1.44
CDH8-213ENST00000584966 SKOR2Q2VWA4 1001 aaPredicted RBP6.07□□□□□ -1.44
CDH8-213ENST00000584966 ZSCAN23Q3MJ62 389 aa6.07□□□□□ -1.44
CDH8-213ENST00000584966 RPS26P11Q5JNZ5 115 aaPredicted RBP6.07□□□□□ -1.44
CDH8-213ENST00000584966 C9orf57Q5W0N0 161 aa6.07□□□□□ -1.44
CDH8-213ENST00000584966 LMBRD2Q68DH5 695 aaPredicted RBP6.07□□□□□ -1.44
CDH8-213ENST00000584966 DCLRE1AQ6PJP8 1040 aa6.07□□□□□ -1.44
CDH8-213ENST00000584966 LIMS2Q7Z4I7 341 aa6.07□□□□□ -1.44
CDH8-213ENST00000584966 GDPD5Q8WTR4 605 aa6.07□□□□□ -1.44
CDH8-213ENST00000584966 ARNTL2Q8WYA1 636 aa6.07□□□□□ -1.44
CDH8-213ENST00000584966 CCDC127Q96BQ5 260 aa6.07□□□□□ -1.44
CDH8-213ENST00000584966 ZNF558Q96NG5 402 aa6.07□□□□□ -1.44
CDH8-213ENST00000584966 NECAB3Q96P71 396 aaPredicted RBP6.07□□□□□ -1.44
CDH8-213ENST00000584966 RPS6KC1Q96S38 1066 aa6.07□□□□□ -1.44
CDH8-213ENST00000584966 CGRRF1Q99675 332 aa6.07□□□□□ -1.44
CDH8-213ENST00000584966 SRRTQ9BXP5 876 aaKnown RBP6.07□□□□□ -1.44
CDH8-213ENST00000584966 GPR62Q9BZJ7 368 aa6.07□□□□□ -1.44
CDH8-213ENST00000584966 CHST7Q9NS84 486 aa6.07□□□□□ -1.44
CDH8-213ENST00000584966 MTMR10Q9NXD2 777 aa6.07□□□□□ -1.44
CDH8-213ENST00000584966 DPP3Q9NY33 737 aa6.07□□□□□ -1.44
CDH8-213ENST00000584966 SPG21Q9NZD8 308 aa6.07□□□□□ -1.44
CDH8-213ENST00000584966 MTUS1Q9ULD2 1270 aa6.07□□□□□ -1.44
CDH8-213ENST00000584966 UBQLN1Q9UMX0 589 aaKnown RBP6.07□□□□□ -1.44
CDH8-213ENST00000584966 RWDD3Q9Y3V2 267 aa6.07□□□□□ -1.44
CDH8-213ENST00000584966 PCDHB12Q9Y5F1 795 aa6.07□□□□□ -1.44
CDH8-213ENST00000584966 A0A096LPE4 126 aa6.06□□□□□ -1.44
CDH8-213ENST00000584966 FAM95CA0A1B0GW59 222 aa6.06□□□□□ -1.44
CDH8-213ENST00000584966 A0A1W2PPZ6 126 aa6.06□□□□□ -1.44
CDH8-213ENST00000584966 BICDL2A1A5D9 508 aa6.06□□□□□ -1.44
CDH8-213ENST00000584966 SYCE3A1L190 88 aa6.06□□□□□ -1.44
CDH8-213ENST00000584966 M0QZQ0 153 aa6.06□□□□□ -1.44
CDH8-213ENST00000584966 PODXLO00592 558 aa6.06□□□□□ -1.44
CDH8-213ENST00000584966 ENC1O14682 589 aa6.06□□□□□ -1.44
CDH8-213ENST00000584966 IKBKBO14920 756 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms