RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 FERP16591 822 aa14.64□□□□□ -0.07
TRAF4-215ENST00000584944 SP100P23497 879 aaPredicted RBP14.64□□□□□ -0.07
TRAF4-215ENST00000584944 YWHAQP27348 245 aa14.64□□□□□ -0.07
TRAF4-215ENST00000584944 ZNF132P52740 706 aa14.64□□□□□ -0.07
TRAF4-215ENST00000584944 PTPN21Q16825 1174 aa14.64□□□□□ -0.07
TRAF4-215ENST00000584944 SFMBT2Q5VUG0 894 aa14.64□□□□□ -0.07
TRAF4-215ENST00000584944 LCLAT1Q6UWP7 414 aa14.64□□□□□ -0.07
TRAF4-215ENST00000584944 FBXL6Q8N531 539 aa14.64□□□□□ -0.07
TRAF4-215ENST00000584944 TDRD5Q8NAT2 981 aaKnown RBP14.64□□□□□ -0.07
TRAF4-215ENST00000584944 MSANTD4Q8NCY6 345 aa14.64□□□□□ -0.07
TRAF4-215ENST00000584944 UBA3Q8TBC4 463 aa14.64□□□□□ -0.07
TRAF4-215ENST00000584944 MRPS31Q92665 395 aaKnown RBP14.64□□□□□ -0.07
TRAF4-215ENST00000584944 GOLGA1Q92805 767 aa14.64□□□□□ -0.07
TRAF4-215ENST00000584944 NAA15Q9BXJ9 866 aaKnown RBP14.64□□□□□ -0.07
TRAF4-215ENST00000584944 NACA2Q9H009 215 aa14.64□□□□□ -0.07
TRAF4-215ENST00000584944 ATXN3LQ9H3M9 355 aa14.64□□□□□ -0.07
TRAF4-215ENST00000584944 ZNHIT6Q9NWK9 470 aaKnown RBP14.64□□□□□ -0.07
TRAF4-215ENST00000584944 DNMT3BQ9UBC3 853 aaKnown RBP14.64□□□□□ -0.07
TRAF4-215ENST00000584944 CDH22Q9UJ99 828 aa14.64□□□□□ -0.07
TRAF4-215ENST00000584944 MYO6Q9UM54 1294 aa14.64□□□□□ -0.07
TRAF4-215ENST00000584944 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.64□□□□□ -0.07
TRAF4-215ENST00000584944 LUC7L2Q9Y383 392 aaKnown RBP14.64□□□□□ -0.07
TRAF4-215ENST00000584944 CACNA1HO95180 2353 aa14.64□□□□□ -0.07
TRAF4-215ENST00000584944 GOLGA6L6A8MZA4 724 aa14.63□□□□□ -0.07
TRAF4-215ENST00000584944 NOL4O94818 638 aa14.63□□□□□ -0.07
TRAF4-215ENST00000584944 MICAL2O94851 1124 aa14.63□□□□□ -0.07
TRAF4-215ENST00000584944 PNMA6AP0CW24 399 aaPredicted RBP14.63□□□□□ -0.07
TRAF4-215ENST00000584944 GABRR2P28476 465 aa14.63□□□□□ -0.07
TRAF4-215ENST00000584944 NTHL1P78549 312 aa14.63□□□□□ -0.07
TRAF4-215ENST00000584944 ASIC2Q16515 512 aa14.63□□□□□ -0.07
TRAF4-215ENST00000584944 TAF3Q5VWG9 929 aa14.63□□□□□ -0.07
TRAF4-215ENST00000584944 SARM1Q6SZW1 724 aa14.63□□□□□ -0.07
TRAF4-215ENST00000584944 CLEC20AQ6ZU45 233 aa14.63□□□□□ -0.07
TRAF4-215ENST00000584944 SLC47A2Q86VL8 602 aa14.63□□□□□ -0.07
TRAF4-215ENST00000584944 SUGP1Q8IWZ8 645 aaKnown RBP14.63□□□□□ -0.07
TRAF4-215ENST00000584944 STKLD1Q8NE28 680 aa14.63□□□□□ -0.07
TRAF4-215ENST00000584944 PDZD8Q8NEN9 1154 aa14.63□□□□□ -0.07
TRAF4-215ENST00000584944 ZNF606Q8WXB4 792 aa14.63□□□□□ -0.07
TRAF4-215ENST00000584944 ING5Q8WYH8 240 aa14.63□□□□□ -0.07
TRAF4-215ENST00000584944 TFAP2BQ92481 460 aa14.63□□□□□ -0.07
TRAF4-215ENST00000584944 FBXO32Q969P5 355 aa14.63□□□□□ -0.07
TRAF4-215ENST00000584944 EDEM3Q9BZQ6 932 aa14.63□□□□□ -0.07
TRAF4-215ENST00000584944 POMKQ9H5K3 350 aa14.63□□□□□ -0.07
TRAF4-215ENST00000584944 TRPM5Q9NZQ8 1165 aa14.63□□□□□ -0.07
TRAF4-215ENST00000584944 AJAP1Q9UKB5 411 aaPredicted RBP14.63□□□□□ -0.07
TRAF4-215ENST00000584944 A0A1W2PRU2 124 aa14.62□□□□□ -0.07
TRAF4-215ENST00000584944 XPO1O14980 1071 aaKnown RBP14.62□□□□□ -0.07
TRAF4-215ENST00000584944 EPHB6O15197 1021 aa14.62□□□□□ -0.07
TRAF4-215ENST00000584944 CYP11B1P15538 503 aa14.62□□□□□ -0.07
TRAF4-215ENST00000584944 PPP3CCP48454 512 aa14.62□□□□□ -0.07
TRAF4-215ENST00000584944 SLC5A3P53794 718 aa14.62□□□□□ -0.07
TRAF4-215ENST00000584944 PTPN5P54829 565 aa14.62□□□□□ -0.07
TRAF4-215ENST00000584944 PDE4CQ08493 712 aa14.62□□□□□ -0.07
TRAF4-215ENST00000584944 TCF15Q12870 199 aa14.62□□□□□ -0.07
TRAF4-215ENST00000584944 MTMR3Q13615 1198 aa14.62□□□□□ -0.07
TRAF4-215ENST00000584944 PAQR9Q6ZVX9 377 aa14.62□□□□□ -0.07
TRAF4-215ENST00000584944 VPS36Q86VN1 386 aa14.62□□□□□ -0.07
TRAF4-215ENST00000584944 GAS2L3Q86XJ1 694 aa14.62□□□□□ -0.07
TRAF4-215ENST00000584944 ZNF677Q86XU0 584 aa14.62□□□□□ -0.07
TRAF4-215ENST00000584944 KMT2EQ8IZD2 1858 aa14.62□□□□□ -0.07
TRAF4-215ENST00000584944 HS6ST3Q8IZP7 471 aa14.62□□□□□ -0.07
TRAF4-215ENST00000584944 ANP32BQ92688 251 aaKnown RBP14.62□□□□□ -0.07
TRAF4-215ENST00000584944 SECISBP2LQ93073 1101 aaKnown RBP14.62□□□□□ -0.07
TRAF4-215ENST00000584944 TRMT2BQ96GJ1 504 aaKnown RBP14.62□□□□□ -0.07
TRAF4-215ENST00000584944 PHOX2BQ99453 314 aa14.62□□□□□ -0.07
TRAF4-215ENST00000584944 PRRX2Q99811 253 aa14.62□□□□□ -0.07
TRAF4-215ENST00000584944 SMOQ99835 787 aa14.62□□□□□ -0.07
TRAF4-215ENST00000584944 GPR88Q9GZN0 384 aa14.62□□□□□ -0.07
TRAF4-215ENST00000584944 CSNK1G1Q9HCP0 422 aa14.62□□□□□ -0.07
TRAF4-215ENST00000584944 TRPC7Q9HCX4 862 aa14.62□□□□□ -0.07
TRAF4-215ENST00000584944 PNPLA8Q9NP80 782 aa14.62□□□□□ -0.07
TRAF4-215ENST00000584944 COMMD8Q9NX08 183 aa14.62□□□□□ -0.07
TRAF4-215ENST00000584944 ZFP37Q9Y6Q3 630 aaPredicted RBP14.62□□□□□ -0.07
TRAF4-215ENST00000584944 A0A1W2PQJ5 194 aa14.61□□□□□ -0.07
TRAF4-215ENST00000584944 GOLGA6L3A6NEY3 463 aa14.61□□□□□ -0.07
TRAF4-215ENST00000584944 LRRC53A6NM62 1247 aa14.61□□□□□ -0.07
TRAF4-215ENST00000584944 CALCAP01258 141 aa14.61□□□□□ -0.07
TRAF4-215ENST00000584944 CLCN1P35523 988 aa14.61□□□□□ -0.07
TRAF4-215ENST00000584944 TKTL1P51854 596 aa14.61□□□□□ -0.07
TRAF4-215ENST00000584944 CACNA2D1P54289 1103 aa14.61□□□□□ -0.07
TRAF4-215ENST00000584944 JAM2P57087 298 aa14.61□□□□□ -0.07
TRAF4-215ENST00000584944 FIGNQ5HY92 759 aa14.61□□□□□ -0.07
TRAF4-215ENST00000584944 TMC6Q7Z403 805 aa14.61□□□□□ -0.07
TRAF4-215ENST00000584944 PIGZQ86VD9 579 aa14.61□□□□□ -0.07
TRAF4-215ENST00000584944 GPIHBP1Q8IV16 184 aa14.61□□□□□ -0.07
TRAF4-215ENST00000584944 PASD1Q8IV76 773 aa14.61□□□□□ -0.07
TRAF4-215ENST00000584944 ARHGAP18Q8N392 663 aa14.61□□□□□ -0.07
TRAF4-215ENST00000584944 PLCD3Q8N3E9 789 aa14.61□□□□□ -0.07
TRAF4-215ENST00000584944 TMEM35BQ8NCS4 154 aa14.61□□□□□ -0.07
TRAF4-215ENST00000584944 IPO4Q8TEX9 1081 aaKnown RBP14.61□□□□□ -0.07
TRAF4-215ENST00000584944 UBXN6Q9BZV1 441 aa14.61□□□□□ -0.07
TRAF4-215ENST00000584944 MIS12Q9H081 205 aa14.61□□□□□ -0.07
TRAF4-215ENST00000584944 ACP6Q9NPH0 428 aa14.61□□□□□ -0.07
TRAF4-215ENST00000584944 TLR8Q9NR97 1041 aaKnown RBP14.61□□□□□ -0.07
TRAF4-215ENST00000584944 ZMYM5Q9UJ78 669 aa14.61□□□□□ -0.07
TRAF4-215ENST00000584944 ITIH6Q6UXX5 1313 aa14.61□□□□□ -0.07
TRAF4-215ENST00000584944 C2CD4DB7Z1M9 353 aa14.6□□□□□ -0.07
TRAF4-215ENST00000584944 DPYSL4O14531 572 aa14.6□□□□□ -0.07
TRAF4-215ENST00000584944 BEST1O76090 585 aa14.6□□□□□ -0.07
TRAF4-215ENST00000584944 LCP1P13796 627 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms