RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 CGRRF1Q99675 332 aa14□□□□□ -0.17
CDK5RAP3-234ENST00000584525 ACBD6Q9BR61 282 aa14□□□□□ -0.17
CDK5RAP3-234ENST00000584525 INTS13Q9NVM9 706 aa14□□□□□ -0.17
CDK5RAP3-234ENST00000584525 DDX43Q9NXZ2 648 aaKnown RBP14□□□□□ -0.17
CDK5RAP3-234ENST00000584525 EBF1Q9UH73 591 aa14□□□□□ -0.17
CDK5RAP3-234ENST00000584525 RALYQ9UKM9 306 aaKnown RBP14□□□□□ -0.17
CDK5RAP3-234ENST00000584525 WNT6Q9Y6F9 365 aa14□□□□□ -0.17
CDK5RAP3-234ENST00000584525 CHD6Q8TD26 2715 aa13.99□□□□□ -0.17
CDK5RAP3-234ENST00000584525 BIN1O00499 593 aa13.99□□□□□ -0.17
CDK5RAP3-234ENST00000584525 NOL4O94818 638 aa13.99□□□□□ -0.17
CDK5RAP3-234ENST00000584525 USP17L7P0C7H9 530 aa13.99□□□□□ -0.17
CDK5RAP3-234ENST00000584525 PSMC2P35998 433 aaKnown RBP13.99□□□□□ -0.17
CDK5RAP3-234ENST00000584525 AP3M2P53677 418 aa13.99□□□□□ -0.17
CDK5RAP3-234ENST00000584525 MYL7Q01449 175 aa13.99□□□□□ -0.17
CDK5RAP3-234ENST00000584525 NR1H3Q13133 447 aa13.99□□□□□ -0.17
CDK5RAP3-234ENST00000584525 ADAM9Q13443 819 aa13.99□□□□□ -0.17
CDK5RAP3-234ENST00000584525 PSMD6Q15008 389 aa13.99□□□□□ -0.17
CDK5RAP3-234ENST00000584525 DAB2IPQ5VWQ8 1189 aa13.99□□□□□ -0.17
CDK5RAP3-234ENST00000584525 KLHL10Q6JEL2 608 aa13.99□□□□□ -0.17
CDK5RAP3-234ENST00000584525 TSTD1Q8NFU3 115 aa13.99□□□□□ -0.17
CDK5RAP3-234ENST00000584525 NUP62CLQ9H1M0 184 aa13.99□□□□□ -0.17
CDK5RAP3-234ENST00000584525 KCTD10Q9H3F6 313 aa13.99□□□□□ -0.17
CDK5RAP3-234ENST00000584525 ABCB6Q9NP58 842 aa13.99□□□□□ -0.17
CDK5RAP3-234ENST00000584525 GTF3C4Q9UKN8 822 aa13.99□□□□□ -0.17
CDK5RAP3-234ENST00000584525 L1RE1Q9UN81 338 aa13.99□□□□□ -0.17
CDK5RAP3-234ENST00000584525 TRAF3IP3Q9Y228 551 aa13.99□□□□□ -0.17
CDK5RAP3-234ENST00000584525 BICDL2A1A5D9 508 aa13.98□□□□□ -0.17
CDK5RAP3-234ENST00000584525 BCLAF3A2AJT9 711 aaKnown RBP13.98□□□□□ -0.17
CDK5RAP3-234ENST00000584525 KHNYNO15037 678 aaKnown RBP13.98□□□□□ -0.17
CDK5RAP3-234ENST00000584525 TADA3O75528 432 aa13.98□□□□□ -0.17
CDK5RAP3-234ENST00000584525 PROS1P07225 676 aa13.98□□□□□ -0.17
CDK5RAP3-234ENST00000584525 ZNF77Q15935 545 aa13.98□□□□□ -0.17
CDK5RAP3-234ENST00000584525 USP39Q53GS9 565 aaKnown RBP13.98□□□□□ -0.17
CDK5RAP3-234ENST00000584525 INTS6LQ5JSJ4 861 aaKnown RBP13.98□□□□□ -0.17
CDK5RAP3-234ENST00000584525 INTS8Q75QN2 995 aaKnown RBP13.98□□□□□ -0.17
CDK5RAP3-234ENST00000584525 SPATA2LQ8IUW3 424 aaPredicted RBP13.98□□□□□ -0.17
CDK5RAP3-234ENST00000584525 SLC9A9Q8IVB4 645 aa13.98□□□□□ -0.17
CDK5RAP3-234ENST00000584525 SCN4BQ8IWT1 228 aa13.98□□□□□ -0.17
CDK5RAP3-234ENST00000584525 FAM186BQ8IYM0 893 aa13.98□□□□□ -0.17
CDK5RAP3-234ENST00000584525 LRRC52Q8N7C0 313 aa13.98□□□□□ -0.17
CDK5RAP3-234ENST00000584525 ARL14EPQ8N8R7 260 aaPredicted RBP13.98□□□□□ -0.17
CDK5RAP3-234ENST00000584525 C1orf127Q8N9H9 656 aa13.98□□□□□ -0.17
CDK5RAP3-234ENST00000584525 CCDC150Q8NCX0 1101 aa13.98□□□□□ -0.17
CDK5RAP3-234ENST00000584525 CCDC26Q8TAB7 109 aa13.98□□□□□ -0.17
CDK5RAP3-234ENST00000584525 SH3RF2Q8TEC5 729 aa13.98□□□□□ -0.17
CDK5RAP3-234ENST00000584525 EZH1Q92800 747 aaPredicted RBP13.98□□□□□ -0.17
CDK5RAP3-234ENST00000584525 TRMT2BQ96GJ1 504 aaKnown RBP13.98□□□□□ -0.17
CDK5RAP3-234ENST00000584525 MYRFLQ96LU7 910 aa13.98□□□□□ -0.17
CDK5RAP3-234ENST00000584525 SLC22A12Q96S37 553 aa13.98□□□□□ -0.17
CDK5RAP3-234ENST00000584525 IMPG2Q9BZV3 1241 aa13.98□□□□□ -0.17
CDK5RAP3-234ENST00000584525 MAN1B1Q9UKM7 699 aa13.98□□□□□ -0.17
CDK5RAP3-234ENST00000584525 CEP295Q9C0D2 2601 aa13.98□□□□□ -0.17
CDK5RAP3-234ENST00000584525 GIPC1O14908 333 aa13.97□□□□□ -0.17
CDK5RAP3-234ENST00000584525 HDCP19113 662 aa13.97□□□□□ -0.17
CDK5RAP3-234ENST00000584525 PRCPP42785 496 aa13.97□□□□□ -0.17
CDK5RAP3-234ENST00000584525 SEC13P55735 322 aa13.97□□□□□ -0.17
CDK5RAP3-234ENST00000584525 TNNC1P63316 161 aa13.97□□□□□ -0.17
CDK5RAP3-234ENST00000584525 LRRC63Q05C16 580 aa13.97□□□□□ -0.17
CDK5RAP3-234ENST00000584525 FOXC1Q12948 553 aa13.97□□□□□ -0.17
CDK5RAP3-234ENST00000584525 EML3Q32P44 896 aa13.97□□□□□ -0.17
CDK5RAP3-234ENST00000584525 EDRF1Q3B7T1 1238 aa13.97□□□□□ -0.17
CDK5RAP3-234ENST00000584525 C2orf27AQ580R0 203 aa13.97□□□□□ -0.17
CDK5RAP3-234ENST00000584525 TCERG1LQ5VWI1 586 aa13.97□□□□□ -0.17
CDK5RAP3-234ENST00000584525 C11orf74Q86VG3 221 aa13.97□□□□□ -0.17
CDK5RAP3-234ENST00000584525 TTC30AQ86WT1 665 aa13.97□□□□□ -0.17
CDK5RAP3-234ENST00000584525 TMEM86AQ8N2M4 240 aa13.97□□□□□ -0.17
CDK5RAP3-234ENST00000584525 TRIML1Q8N9V2 468 aa13.97□□□□□ -0.17
CDK5RAP3-234ENST00000584525 MMS19Q96T76 1030 aa13.97□□□□□ -0.17
CDK5RAP3-234ENST00000584525 TPSD1Q9BZJ3 242 aa13.97□□□□□ -0.17
CDK5RAP3-234ENST00000584525 LINC00597Q9H2U6 94 aa13.97□□□□□ -0.17
CDK5RAP3-234ENST00000584525 MMRN2Q9H8L6 949 aa13.97□□□□□ -0.17
CDK5RAP3-234ENST00000584525 SNX9Q9Y5X1 595 aa13.97□□□□□ -0.17
CDK5RAP3-234ENST00000584525 LNP1A1A4G5 178 aa13.96□□□□□ -0.17
CDK5RAP3-234ENST00000584525 C2orf78A6NCI8 922 aa13.96□□□□□ -0.17
CDK5RAP3-234ENST00000584525 STX10O60499 249 aa13.96□□□□□ -0.17
CDK5RAP3-234ENST00000584525 TRIM21P19474 475 aaKnown RBP13.96□□□□□ -0.17
CDK5RAP3-234ENST00000584525 LHX1P48742 406 aa13.96□□□□□ -0.17
CDK5RAP3-234ENST00000584525 VAMP7P51809 220 aa13.96□□□□□ -0.17
CDK5RAP3-234ENST00000584525 WNT7BP56706 349 aa13.96□□□□□ -0.17
CDK5RAP3-234ENST00000584525 ZNF252P-AS1Q0IIN9 211 aa13.96□□□□□ -0.17
CDK5RAP3-234ENST00000584525 USP4Q13107 963 aa13.96□□□□□ -0.17
CDK5RAP3-234ENST00000584525 NFIL3Q16649 462 aa13.96□□□□□ -0.17
CDK5RAP3-234ENST00000584525 TPD52L1Q16890 204 aaPredicted RBP13.96□□□□□ -0.17
CDK5RAP3-234ENST00000584525 CCDC142Q17RM4 750 aa13.96□□□□□ -0.17
CDK5RAP3-234ENST00000584525 CCDC40Q4G0X9 1142 aa13.96□□□□□ -0.17
CDK5RAP3-234ENST00000584525 SH3PXD2AQ5TCZ1 1133 aa13.96□□□□□ -0.17
CDK5RAP3-234ENST00000584525 ANO7Q6IWH7 933 aa13.96□□□□□ -0.17
CDK5RAP3-234ENST00000584525 TRAPPC11Q7Z392 1133 aa13.96□□□□□ -0.17
CDK5RAP3-234ENST00000584525 OSTM1Q86WC4 334 aa13.96□□□□□ -0.17
CDK5RAP3-234ENST00000584525 ADGRF2Q8IZF7 708 aa13.96□□□□□ -0.17
CDK5RAP3-234ENST00000584525 OR5B17Q8NGF7 314 aa13.96□□□□□ -0.17
CDK5RAP3-234ENST00000584525 SYAP1Q96A49 352 aaPredicted RBP13.96□□□□□ -0.17
CDK5RAP3-234ENST00000584525 DHTKD1Q96HY7 919 aaPredicted RBP13.96□□□□□ -0.17
CDK5RAP3-234ENST00000584525 HPDLQ96IR7 371 aa13.96□□□□□ -0.17
CDK5RAP3-234ENST00000584525 PKMYT1Q99640 499 aa13.96□□□□□ -0.17
CDK5RAP3-234ENST00000584525 GCNT4Q9P109 453 aa13.96□□□□□ -0.17
CDK5RAP3-234ENST00000584525 DACH1Q9UI36 760 aa13.96□□□□□ -0.17
CDK5RAP3-234ENST00000584525 CTNND2Q9UQB3 1225 aa13.96□□□□□ -0.17
CDK5RAP3-234ENST00000584525 CNOT1A5YKK6 2376 aaKnown RBP13.96□□□□□ -0.18
CDK5RAP3-234ENST00000584525 SDK1Q7Z5N4 2213 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 176.4 ms