RNA–Protein interactions for RNA: ENST00000584439.1

CTC1-212, Transcript of CST telomere replication complex component 1, humanhuman

TSL 4

Gene CTC1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-212ENST00000584439 ARHGAP29Q52LW3 1261 aa6.78□□□□□ -1.32
CTC1-212ENST00000584439 SEZ6Q53EL9 994 aa6.78□□□□□ -1.32
CTC1-212ENST00000584439 USP39Q53GS9 565 aaKnown RBP6.78□□□□□ -1.32
CTC1-212ENST00000584439 PRR16Q569H4 304 aa6.78□□□□□ -1.32
CTC1-212ENST00000584439 FBXW10Q5XX13 1052 aa6.78□□□□□ -1.32
CTC1-212ENST00000584439 PDXDC1Q6P996 788 aa6.78□□□□□ -1.32
CTC1-212ENST00000584439 ANO5Q75V66 913 aa6.78□□□□□ -1.32
CTC1-212ENST00000584439 PCGF5Q86SE9 256 aa6.78□□□□□ -1.32
CTC1-212ENST00000584439 RASSF3Q86WH2 238 aa6.78□□□□□ -1.32
CTC1-212ENST00000584439 TTC30AQ86WT1 665 aa6.78□□□□□ -1.32
CTC1-212ENST00000584439 TMC8Q8IU68 726 aa6.78□□□□□ -1.32
CTC1-212ENST00000584439 SYT12Q8IV01 421 aa6.78□□□□□ -1.32
CTC1-212ENST00000584439 NAXDQ8IW45 347 aa6.78□□□□□ -1.32
CTC1-212ENST00000584439 SLITRK4Q8IW52 837 aa6.78□□□□□ -1.32
CTC1-212ENST00000584439 CNNM3Q8NE01 707 aa6.78□□□□□ -1.32
CTC1-212ENST00000584439 SPATA18Q8TC71 538 aa6.78□□□□□ -1.32
CTC1-212ENST00000584439 SMAD5Q99717 465 aaKnown RBP6.78□□□□□ -1.32
CTC1-212ENST00000584439 CSRNP2Q9H175 543 aa6.78□□□□□ -1.32
CTC1-212ENST00000584439 GLT8D2Q9H1C3 349 aa6.78□□□□□ -1.32
CTC1-212ENST00000584439 UNC45AQ9H3U1 944 aa6.78□□□□□ -1.32
CTC1-212ENST00000584439 EBF3Q9H4W6 596 aa6.78□□□□□ -1.32
CTC1-212ENST00000584439 GKN1Q9NS71 199 aa6.78□□□□□ -1.32
CTC1-212ENST00000584439 GJB4Q9NTQ9 266 aa6.78□□□□□ -1.32
CTC1-212ENST00000584439 TBC1D22BQ9NU19 505 aa6.78□□□□□ -1.32
CTC1-212ENST00000584439 ZMYM5Q9UJ78 669 aa6.78□□□□□ -1.32
CTC1-212ENST00000584439 DOCK9Q9BZ29 2069 aa6.78□□□□□ -1.32
CTC1-212ENST00000584439 ICE1Q9Y2F5 2266 aa6.78□□□□□ -1.32
CTC1-212ENST00000584439 C2CD3Q4AC94 2353 aa6.77□□□□□ -1.32
CTC1-212ENST00000584439 CCDC196A0A1B0GTZ2 297 aa6.77□□□□□ -1.33
CTC1-212ENST00000584439 CFAP69A5D8W1 941 aa6.77□□□□□ -1.33
CTC1-212ENST00000584439 B2RBV5 119 aa6.77□□□□□ -1.33
CTC1-212ENST00000584439 CAPN9O14815 690 aa6.77□□□□□ -1.33
CTC1-212ENST00000584439 EPB41L2O43491 1005 aaKnown RBP6.77□□□□□ -1.33
CTC1-212ENST00000584439 SLC28A2O43868 658 aa6.77□□□□□ -1.33
CTC1-212ENST00000584439 ZNF500O60304 480 aaPredicted RBP6.77□□□□□ -1.33
CTC1-212ENST00000584439 PSMD10O75832 226 aa6.77□□□□□ -1.33
CTC1-212ENST00000584439 REC8O95072 547 aa6.77□□□□□ -1.33
CTC1-212ENST00000584439 LARGE1O95461 756 aa6.77□□□□□ -1.33
CTC1-212ENST00000584439 CTDNEP1O95476 244 aa6.77□□□□□ -1.33
CTC1-212ENST00000584439 VNN2O95498 520 aa6.77□□□□□ -1.33
CTC1-212ENST00000584439 TDP2O95551 362 aa6.77□□□□□ -1.33
CTC1-212ENST00000584439 ATF2P15336 505 aa6.77□□□□□ -1.33
CTC1-212ENST00000584439 ATXN3P54252 364 aaPredicted RBP6.77□□□□□ -1.33
CTC1-212ENST00000584439 CDC42EP1Q00587 391 aa6.77□□□□□ -1.33
CTC1-212ENST00000584439 SCRN1Q12765 414 aa6.77□□□□□ -1.33
CTC1-212ENST00000584439 GRSF1Q12849 480 aaKnown RBP eCLIP6.77□□□□□ -1.33
CTC1-212ENST00000584439 RAPGEF1Q13905 1077 aa6.77□□□□□ -1.33
CTC1-212ENST00000584439 TEAD4Q15561 434 aa6.77□□□□□ -1.33
CTC1-212ENST00000584439 INO80DQ53TQ3 878 aaPredicted RBP6.77□□□□□ -1.33
CTC1-212ENST00000584439 PERM1Q5SV97 790 aa6.77□□□□□ -1.33
CTC1-212ENST00000584439 PEAR1Q5VY43 1037 aaPredicted RBP6.77□□□□□ -1.33
CTC1-212ENST00000584439 GAREM2Q75VX8 874 aa6.77□□□□□ -1.33
CTC1-212ENST00000584439 RTL10Q7L3V2 364 aa6.77□□□□□ -1.33
CTC1-212ENST00000584439 GPR155Q7Z3F1 870 aa6.77□□□□□ -1.33
CTC1-212ENST00000584439 ZNF438Q7Z4V0 828 aa6.77□□□□□ -1.33
CTC1-212ENST00000584439 SRGAP1Q7Z6B7 1085 aa6.77□□□□□ -1.33
CTC1-212ENST00000584439 TCEAL8Q8IYN2 117 aa6.77□□□□□ -1.33
CTC1-212ENST00000584439 PAF1Q8N7H5 531 aa6.77□□□□□ -1.33
CTC1-212ENST00000584439 RNF149Q8NC42 400 aa6.77□□□□□ -1.33
CTC1-212ENST00000584439 OLIG1Q8TAK6 271 aa6.77□□□□□ -1.33
CTC1-212ENST00000584439 ETNPPLQ8TBG4 499 aa6.77□□□□□ -1.33
CTC1-212ENST00000584439 TBCKQ8TEA7 893 aa6.77□□□□□ -1.33
CTC1-212ENST00000584439 SLC5A5Q92911 643 aa6.77□□□□□ -1.33
CTC1-212ENST00000584439 E2F7Q96AV8 911 aa6.77□□□□□ -1.33
CTC1-212ENST00000584439 ZNF512Q96ME7 567 aaPredicted RBP6.77□□□□□ -1.33
CTC1-212ENST00000584439 NAP1L5Q96NT1 182 aaPredicted RBP6.77□□□□□ -1.33
CTC1-212ENST00000584439 TM6SF1Q9BZW5 370 aa6.77□□□□□ -1.33
CTC1-212ENST00000584439 CRISPLD1Q9H336 500 aa6.77□□□□□ -1.33
CTC1-212ENST00000584439 GOLGA2P5Q9HBQ8 144 aa6.77□□□□□ -1.33
CTC1-212ENST00000584439 PTPRHQ9HD43 1115 aa6.77□□□□□ -1.33
CTC1-212ENST00000584439 C6orf50Q9HD87 102 aa6.77□□□□□ -1.33
CTC1-212ENST00000584439 FAM13BQ9NYF5 915 aa6.77□□□□□ -1.33
CTC1-212ENST00000584439 TAGLN3Q9UI15 199 aa6.77□□□□□ -1.33
CTC1-212ENST00000584439 SLC6A14Q9UN76 642 aa6.77□□□□□ -1.33
CTC1-212ENST00000584439 BACE2Q9Y5Z0 518 aa6.77□□□□□ -1.33
CTC1-212ENST00000584439 CELSR2Q9HCU4 2923 aa6.77□□□□□ -1.33
CTC1-212ENST00000584439 CKAP5Q14008 2032 aa6.76□□□□□ -1.33
CTC1-212ENST00000584439 NUMA1Q14980 2115 aa6.76□□□□□ -1.33
CTC1-212ENST00000584439 CYP3A7-CYP3A51PA0A087WV96 503 aa6.76□□□□□ -1.33
CTC1-212ENST00000584439 PLK4O00444 970 aa6.76□□□□□ -1.33
CTC1-212ENST00000584439 ARHGAP33O14559 1287 aa6.76□□□□□ -1.33
CTC1-212ENST00000584439 TBX3O15119 743 aa6.76□□□□□ -1.33
CTC1-212ENST00000584439 SLC37A4O43826 429 aa6.76□□□□□ -1.33
CTC1-212ENST00000584439 NTRK1P04629 796 aa6.76□□□□□ -1.33
CTC1-212ENST00000584439 SERPINF2P08697 491 aa6.76□□□□□ -1.33
CTC1-212ENST00000584439 FAM153BP0C7A2 387 aa6.76□□□□□ -1.33
CTC1-212ENST00000584439 CYP3A7P24462 503 aa6.76□□□□□ -1.33
CTC1-212ENST00000584439 PSMA5P28066 241 aa6.76□□□□□ -1.33
CTC1-212ENST00000584439 GNA11P29992 359 aa6.76□□□□□ -1.33
CTC1-212ENST00000584439 ELF1P32519 619 aa6.76□□□□□ -1.33
CTC1-212ENST00000584439 P2RY2P41231 377 aa6.76□□□□□ -1.33
CTC1-212ENST00000584439 LIG3P49916 1009 aa6.76□□□□□ -1.33
CTC1-212ENST00000584439 CLCNKBP51801 687 aa6.76□□□□□ -1.33
CTC1-212ENST00000584439 CDR1P51861 262 aa6.76□□□□□ -1.33
CTC1-212ENST00000584439 GFPT1Q06210 699 aaPredicted RBP6.76□□□□□ -1.33
CTC1-212ENST00000584439 ST3GAL1Q11201 340 aa6.76□□□□□ -1.33
CTC1-212ENST00000584439 STK3Q13188 491 aa6.76□□□□□ -1.33
CTC1-212ENST00000584439 CAMK2GQ13555 558 aaPredicted RBP6.76□□□□□ -1.33
CTC1-212ENST00000584439 RUNX3Q13761 415 aa6.76□□□□□ -1.33
CTC1-212ENST00000584439 TLR1Q15399 786 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms