RNA–Protein interactions for RNA: ENST00000584377.5

CSNK1D-222, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 2,891 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-222	ENST00000584377	CPT1B	Q92523	772 aa		13.83	□□□□□ -0.2
CSNK1D-222	ENST00000584377	HEXIM2	Q96MH2	286 aa	Known RBP	13.83	□□□□□ -0.2
CSNK1D-222	ENST00000584377	PDZD7	Q9H5P4	517 aa		13.83	□□□□□ -0.2
CSNK1D-222	ENST00000584377	ASB7	Q9H672	318 aa		13.83	□□□□□ -0.2
CSNK1D-222	ENST00000584377	CYP3A43	Q9HB55	503 aa		13.83	□□□□□ -0.2
CSNK1D-222	ENST00000584377	AKT3	Q9Y243	479 aa		13.83	□□□□□ -0.2
CSNK1D-222	ENST00000584377	PAPPA2	Q9BXP8	1791 aa		13.83	□□□□□ -0.2
CSNK1D-222	ENST00000584377	EVPL	Q92817	2033 aa		13.83	□□□□□ -0.2
CSNK1D-222	ENST00000584377	UBOX5	O94941	541 aa		13.83	□□□□□ -0.2
CSNK1D-222	ENST00000584377	TAC1	P20366	129 aa		13.83	□□□□□ -0.2
CSNK1D-222	ENST00000584377	OSBP	P22059	807 aa		13.83	□□□□□ -0.2
CSNK1D-222	ENST00000584377	FOXN2	P32314	431 aa		13.83	□□□□□ -0.2
CSNK1D-222	ENST00000584377	GPD2	P43304	727 aa		13.83	□□□□□ -0.2
CSNK1D-222	ENST00000584377	GAD2	Q05329	585 aa		13.83	□□□□□ -0.2
CSNK1D-222	ENST00000584377	POU5F1B	Q06416	359 aa		13.83	□□□□□ -0.2
CSNK1D-222	ENST00000584377	LAMB3	Q13751	1172 aa		13.83	□□□□□ -0.2
CSNK1D-222	ENST00000584377	TAF5	Q15542	800 aa		13.83	□□□□□ -0.2
CSNK1D-222	ENST00000584377	GJC2	Q5T442	439 aa	Predicted RBP	13.83	□□□□□ -0.2
CSNK1D-222	ENST00000584377	FAM102A	Q5T9C2	384 aa	Predicted RBP	13.83	□□□□□ -0.2
CSNK1D-222	ENST00000584377	ANKRD22	Q5VYY1	191 aa		13.83	□□□□□ -0.2
CSNK1D-222	ENST00000584377	TAB3	Q8N5C8	712 aa	Predicted RBP	13.83	□□□□□ -0.2
CSNK1D-222	ENST00000584377	MCRS1	Q96EZ8	462 aa		13.83	□□□□□ -0.2
CSNK1D-222	ENST00000584377	HPDL	Q96IR7	371 aa		13.83	□□□□□ -0.2
CSNK1D-222	ENST00000584377	SMC6	Q96SB8	1091 aa		13.83	□□□□□ -0.2
CSNK1D-222	ENST00000584377	PLCD4	Q9BRC7	762 aa		13.83	□□□□□ -0.2
CSNK1D-222	ENST00000584377	ADPGK	Q9BRR6	497 aa		13.83	□□□□□ -0.2
CSNK1D-222	ENST00000584377	CALN1	Q9BXU9	219 aa		13.83	□□□□□ -0.2
CSNK1D-222	ENST00000584377	SENP1	Q9P0U3	644 aa		13.83	□□□□□ -0.2
CSNK1D-222	ENST00000584377	USP18	Q9UMW8	372 aa		13.83	□□□□□ -0.2
CSNK1D-222	ENST00000584377	MGAM	O43451	1857 aa		13.83	□□□□□ -0.2
CSNK1D-222	ENST00000584377		A8MUI8	341 aa		13.82	□□□□□ -0.2
CSNK1D-222	ENST00000584377	HMGCR	P04035	888 aa		13.82	□□□□□ -0.2
CSNK1D-222	ENST00000584377	LGALS2	P05162	132 aa		13.82	□□□□□ -0.2
CSNK1D-222	ENST00000584377	PYGL	P06737	847 aa		13.82	□□□□□ -0.2
CSNK1D-222	ENST00000584377	ATP2A2	P16615	1042 aa	Known RBP	13.82	□□□□□ -0.2
CSNK1D-222	ENST00000584377	RPL22	P35268	128 aa	Known RBP	13.82	□□□□□ -0.2
CSNK1D-222	ENST00000584377	GABRB2	P47870	512 aa		13.82	□□□□□ -0.2
CSNK1D-222	ENST00000584377	GCLC	P48506	637 aa	Predicted RBP	13.82	□□□□□ -0.2
CSNK1D-222	ENST00000584377	ARL4C	P56559	192 aa		13.82	□□□□□ -0.2
CSNK1D-222	ENST00000584377	PPIL2	Q13356	520 aa		13.82	□□□□□ -0.2
CSNK1D-222	ENST00000584377	TAF11	Q15544	211 aa		13.82	□□□□□ -0.2
CSNK1D-222	ENST00000584377	SLC10A6	Q3KNW5	377 aa		13.82	□□□□□ -0.2
CSNK1D-222	ENST00000584377	CMAS	Q8NFW8	434 aa	Predicted RBP	13.82	□□□□□ -0.2
CSNK1D-222	ENST00000584377	PYROXD1	Q8WU10	500 aa		13.82	□□□□□ -0.2
CSNK1D-222	ENST00000584377	VRTN	Q9H8Y1	702 aa		13.82	□□□□□ -0.2
CSNK1D-222	ENST00000584377	PPCS	Q9HAB8	311 aa		13.82	□□□□□ -0.2
CSNK1D-222	ENST00000584377	SLC24A2	Q9UI40	661 aa		13.82	□□□□□ -0.2
CSNK1D-222	ENST00000584377	RPS6KL1	Q9Y6S9	549 aa		13.82	□□□□□ -0.2
CSNK1D-222	ENST00000584377	ASB14	A6NK59	587 aa		13.82	□□□□□ -0.2
CSNK1D-222	ENST00000584377	TTC36	A6NLP5	189 aa		13.82	□□□□□ -0.2
CSNK1D-222	ENST00000584377	APOC4-APOC2	K7ER74	178 aa		13.82	□□□□□ -0.2
CSNK1D-222	ENST00000584377	PRPF4	O43172	522 aa	Known RBP eCLIP	13.82	□□□□□ -0.2	4e-8	■□□□□ 8.5
CSNK1D-222	ENST00000584377	ASMTL	O95671	621 aa		13.82	□□□□□ -0.2
CSNK1D-222	ENST00000584377	APOC2	P02655	101 aa		13.82	□□□□□ -0.2
CSNK1D-222	ENST00000584377	VDR	P11473	427 aa		13.82	□□□□□ -0.2
CSNK1D-222	ENST00000584377	ARF4	P18085	180 aa	Predicted RBP	13.82	□□□□□ -0.2
CSNK1D-222	ENST00000584377	GPX6	P59796	221 aa		13.82	□□□□□ -0.2
CSNK1D-222	ENST00000584377	NCALD	P61601	193 aa		13.82	□□□□□ -0.2
CSNK1D-222	ENST00000584377	ARHGAP1	Q07960	439 aa		13.82	□□□□□ -0.2
CSNK1D-222	ENST00000584377	MOGS	Q13724	837 aa		13.82	□□□□□ -0.2
CSNK1D-222	ENST00000584377	TMEM132D	Q14C87	1099 aa		13.82	□□□□□ -0.2
CSNK1D-222	ENST00000584377	ACAP1	Q15027	740 aa		13.82	□□□□□ -0.2
CSNK1D-222	ENST00000584377	MTFR1	Q15390	333 aa		13.82	□□□□□ -0.2
CSNK1D-222	ENST00000584377	ARMCX2	Q7L311	632 aa		13.82	□□□□□ -0.2
CSNK1D-222	ENST00000584377	UNC45B	Q8IWX7	931 aa		13.82	□□□□□ -0.2
CSNK1D-222	ENST00000584377	C4orf33	Q8N1A6	199 aa		13.82	□□□□□ -0.2
CSNK1D-222	ENST00000584377	GBP7	Q8N8V2	638 aa	Predicted RBP	13.82	□□□□□ -0.2
CSNK1D-222	ENST00000584377	NAT8L	Q8N9F0	302 aa		13.82	□□□□□ -0.2
CSNK1D-222	ENST00000584377	UBA3	Q8TBC4	463 aa		13.82	□□□□□ -0.2
CSNK1D-222	ENST00000584377	EZH1	Q92800	747 aa	Predicted RBP	13.82	□□□□□ -0.2
CSNK1D-222	ENST00000584377	NAF1	Q96HR8	494 aa	Known RBP	13.82	□□□□□ -0.2
CSNK1D-222	ENST00000584377	PITPNM3	Q9BZ71	974 aa		13.82	□□□□□ -0.2
CSNK1D-222	ENST00000584377	ASNSD1	Q9NWL6	643 aa		13.82	□□□□□ -0.2
CSNK1D-222	ENST00000584377	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	13.82	□□□□□ -0.2
CSNK1D-222	ENST00000584377	SMG5	Q9UPR3	1016 aa	Known RBP	13.82	□□□□□ -0.2
CSNK1D-222	ENST00000584377	IGF2BP3	O00425	579 aa	Known RBP eCLIP	13.81	□□□□□ -0.2
CSNK1D-222	ENST00000584377	MCF2L	O15068	1137 aa		13.81	□□□□□ -0.2
CSNK1D-222	ENST00000584377	TRUB2	O95900	331 aa	Known RBP	13.81	□□□□□ -0.2
CSNK1D-222	ENST00000584377	VTN	P04004	478 aa		13.81	□□□□□ -0.2
CSNK1D-222	ENST00000584377	PHB	P35232	272 aa		13.81	□□□□□ -0.2
CSNK1D-222	ENST00000584377	CCNG1	P51959	295 aa		13.81	□□□□□ -0.2
CSNK1D-222	ENST00000584377	EIF3E	P60228	445 aa	Known RBP	13.81	□□□□□ -0.2
CSNK1D-222	ENST00000584377	FNBP1L	Q5T0N5	605 aa		13.81	□□□□□ -0.2
CSNK1D-222	ENST00000584377	CGB2	Q6NT52	195 aa		13.81	□□□□□ -0.2
CSNK1D-222	ENST00000584377	FAM47E	Q6ZV65	393 aa		13.81	□□□□□ -0.2
CSNK1D-222	ENST00000584377	FASTKD5	Q7L8L6	764 aa	Known RBP	13.81	□□□□□ -0.2
CSNK1D-222	ENST00000584377	GALNT15	Q8N3T1	639 aa		13.81	□□□□□ -0.2
CSNK1D-222	ENST00000584377	TEX9	Q8N6V9	391 aa		13.81	□□□□□ -0.2
CSNK1D-222	ENST00000584377	FAM71D	Q8N9W8	422 aa		13.81	□□□□□ -0.2
CSNK1D-222	ENST00000584377	ATP11C	Q8NB49	1132 aa		13.81	□□□□□ -0.2
CSNK1D-222	ENST00000584377	OPTN	Q96CV9	577 aa		13.81	□□□□□ -0.2
CSNK1D-222	ENST00000584377	ADAM33	Q9BZ11	813 aa		13.81	□□□□□ -0.2
CSNK1D-222	ENST00000584377	KLHL14	Q9P2G3	628 aa		13.81	□□□□□ -0.2
CSNK1D-222	ENST00000584377	PRKAG3	Q9UGI9	489 aa		13.81	□□□□□ -0.2
CSNK1D-222	ENST00000584377	CLUH	O75153	1309 aa		13.81	□□□□□ -0.2
CSNK1D-222	ENST00000584377	MAGEB2	O15479	319 aa		13.81	□□□□□ -0.2
CSNK1D-222	ENST00000584377	SSTR1	P30872	391 aa		13.81	□□□□□ -0.2
CSNK1D-222	ENST00000584377	ZNF143	P52747	638 aa	Predicted RBP	13.81	□□□□□ -0.2
CSNK1D-222	ENST00000584377	GEMIN4	P57678	1058 aa	Known RBP	13.81	□□□□□ -0.2
CSNK1D-222	ENST00000584377	LAMC2	Q13753	1193 aa		13.81	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms