RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 C1orf228Q6PIY5 440 aa21.66■■□□□ 1.06
SS18-224ENST00000584083 FILIP1Q7Z7B0 1213 aa21.66■■□□□ 1.06
SS18-224ENST00000584083 RALGPS2Q86X27 583 aaPredicted RBP21.66■■□□□ 1.06
SS18-224ENST00000584083 DUSP9Q99956 384 aaKnown RBP21.66■■□□□ 1.06
SS18-224ENST00000584083 PATJQ8NI35 1801 aa21.65■■□□□ 1.06
SS18-224ENST00000584083 SPECC1L-ADORA2AF8WAN1 911 aa21.65■■□□□ 1.06
SS18-224ENST00000584083 FRMD5Q7Z6J6 570 aa21.65■■□□□ 1.06
SS18-224ENST00000584083 SCAMP5Q8TAC9 235 aa21.65■■□□□ 1.06
SS18-224ENST00000584083 TATDN2Q93075 761 aa21.65■■□□□ 1.06
SS18-224ENST00000584083 FBXO32Q969P5 355 aa21.65■■□□□ 1.06
SS18-224ENST00000584083 CYFIP2Q96F07 1278 aa21.65■■□□□ 1.06
SS18-224ENST00000584083 FAXDC2Q96IV6 333 aa21.65■■□□□ 1.06
SS18-224ENST00000584083 FAM83CQ9BQN1 747 aa21.65■■□□□ 1.06
SS18-224ENST00000584083 EBF3Q9H4W6 596 aa21.65■■□□□ 1.06
SS18-224ENST00000584083 LMAN1LQ9HAT1 526 aa21.65■■□□□ 1.06
SS18-224ENST00000584083 LAMTOR5O43504 91 aa21.64■■□□□ 1.05
SS18-224ENST00000584083 CILPO75339 1184 aa21.64■■□□□ 1.05
SS18-224ENST00000584083 FAM200BP0CF97 657 aa21.64■■□□□ 1.05
SS18-224ENST00000584083 PFKLP17858 780 aa21.64■■□□□ 1.05
SS18-224ENST00000584083 CTHP32929 405 aa21.64■■□□□ 1.05
SS18-224ENST00000584083 RPS9P46781 194 aaKnown RBP21.64■■□□□ 1.05
SS18-224ENST00000584083 STX17P56962 302 aa21.64■■□□□ 1.05
SS18-224ENST00000584083 MAP3K7CLP57077 242 aa21.64■■□□□ 1.05
SS18-224ENST00000584083 PAK1Q13153 545 aa21.64■■□□□ 1.05
SS18-224ENST00000584083 FZD5Q13467 585 aa21.64■■□□□ 1.05
SS18-224ENST00000584083 RUNX3Q13761 415 aa21.64■■□□□ 1.05
SS18-224ENST00000584083 MTF1Q14872 753 aa21.64■■□□□ 1.05
SS18-224ENST00000584083 ZNF394Q53GI3 561 aa21.64■■□□□ 1.05
SS18-224ENST00000584083 TRIM68Q6AZZ1 485 aa21.64■■□□□ 1.05
SS18-224ENST00000584083 TTC39CQ8N584 583 aa21.64■■□□□ 1.05
SS18-224ENST00000584083 PDZD8Q8NEN9 1154 aa21.64■■□□□ 1.05
SS18-224ENST00000584083 RIN3Q8TB24 985 aa21.64■■□□□ 1.05
SS18-224ENST00000584083 SH3RF2Q8TEC5 729 aa21.64■■□□□ 1.05
SS18-224ENST00000584083 WHAMMQ8TF30 809 aa21.64■■□□□ 1.05
SS18-224ENST00000584083 SLC35C1Q96A29 364 aa21.64■■□□□ 1.05
SS18-224ENST00000584083 HNRNPABQ99729 332 aaKnown RBP21.64■■□□□ 1.05
SS18-224ENST00000584083 SMOQ99835 787 aa21.64■■□□□ 1.05
SS18-224ENST00000584083 KIAA1468Q9P260 1216 aa21.64■■□□□ 1.05
SS18-224ENST00000584083 ARHGAP26Q9UNA1 814 aa21.64■■□□□ 1.05
SS18-224ENST00000584083 TNFRSF10BO14763 440 aa21.63■■□□□ 1.05
SS18-224ENST00000584083 BEST1O76090 585 aa21.63■■□□□ 1.05
SS18-224ENST00000584083 ARSAP15289 507 aa21.63■■□□□ 1.05
SS18-224ENST00000584083 SLC5A3P53794 718 aa21.63■■□□□ 1.05
SS18-224ENST00000584083 PDGFRLQ15198 375 aa21.63■■□□□ 1.05
SS18-224ENST00000584083 ZNF77Q15935 545 aa21.63■■□□□ 1.05
SS18-224ENST00000584083 FOXR2Q6PJQ5 311 aa21.63■■□□□ 1.05
SS18-224ENST00000584083 ZNF687Q8N1G0 1237 aa21.63■■□□□ 1.05
SS18-224ENST00000584083 TRIML1Q8N9V2 468 aa21.63■■□□□ 1.05
SS18-224ENST00000584083 ZMIZ2Q8NF64 920 aa21.63■■□□□ 1.05
SS18-224ENST00000584083 JAKMIP2Q96AA8 810 aa21.63■■□□□ 1.05
SS18-224ENST00000584083 HEXIM2Q96MH2 286 aaKnown RBP21.63■■□□□ 1.05
SS18-224ENST00000584083 ARID3AQ99856 593 aa21.63■■□□□ 1.05
SS18-224ENST00000584083 CSNK1G1Q9HCP0 422 aa21.63■■□□□ 1.05
SS18-224ENST00000584083 HPS4Q9NQG7 708 aa21.63■■□□□ 1.05
SS18-224ENST00000584083 CISHQ9NSE2 258 aa21.63■■□□□ 1.05
SS18-224ENST00000584083 DUS2Q9NX74 493 aaKnown RBP21.63■■□□□ 1.05
SS18-224ENST00000584083 CHORDC1Q9UHD1 332 aaPredicted RBP21.63■■□□□ 1.05
SS18-224ENST00000584083 COQ4Q9Y3A0 265 aa21.63■■□□□ 1.05
SS18-224ENST00000584083 PIEZO1Q92508 2521 aa21.63■■□□□ 1.05
SS18-224ENST00000584083 NBL1P41271 181 aa21.62■■□□□ 1.05
SS18-224ENST00000584083 IFNAR2P48551 515 aa21.62■■□□□ 1.05
SS18-224ENST00000584083 USP4Q13107 963 aa21.62■■□□□ 1.05
SS18-224ENST00000584083 TXNDC11Q6PKC3 985 aa21.62■■□□□ 1.05
SS18-224ENST00000584083 OVCA2Q8WZ82 227 aa21.62■■□□□ 1.05
SS18-224ENST00000584083 RNF38Q9H0F5 515 aa21.62■■□□□ 1.05
SS18-224ENST00000584083 COMMD8Q9NX08 183 aa21.62■■□□□ 1.05
SS18-224ENST00000584083 WNT6Q9Y6F9 365 aa21.62■■□□□ 1.05
SS18-224ENST00000584083 MYO16Q9Y6X6 1858 aa21.62■■□□□ 1.05
SS18-224ENST00000584083 SP9P0CG40 484 aa21.61■■□□□ 1.05
SS18-224ENST00000584083 CHRNB1P11230 501 aa21.61■■□□□ 1.05
SS18-224ENST00000584083 FMO5P49326 533 aa21.61■■□□□ 1.05
SS18-224ENST00000584083 LRMPQ12912 555 aa21.61■■□□□ 1.05
SS18-224ENST00000584083 LRRC32Q14392 662 aa21.61■■□□□ 1.05
SS18-224ENST00000584083 PON2Q15165 354 aa21.61■■□□□ 1.05
SS18-224ENST00000584083 CHRDQ9H2X0 955 aa21.61■■□□□ 1.05
SS18-224ENST00000584083 FBXO44Q9H4M3 255 aa21.61■■□□□ 1.05
SS18-224ENST00000584083 SMPD4Q9NXE4 827 aa21.61■■□□□ 1.05
SS18-224ENST00000584083 IL37Q9NZH6 218 aa21.61■■□□□ 1.05
SS18-224ENST00000584083 GMIPQ9P107 970 aa21.61■■□□□ 1.05
SS18-224ENST00000584083 LEFTY2O00292 366 aa21.6■■□□□ 1.05
SS18-224ENST00000584083 GNA14O95837 355 aa21.6■■□□□ 1.05
SS18-224ENST00000584083 OAS1P00973 400 aaKnown RBP21.6■■□□□ 1.05
SS18-224ENST00000584083 MBL2P11226 248 aaPredicted RBP21.6■■□□□ 1.05
SS18-224ENST00000584083 SLC7A9P82251 487 aa21.6■■□□□ 1.05
SS18-224ENST00000584083 MTAPQ13126 283 aa21.6■■□□□ 1.05
SS18-224ENST00000584083 CUL2Q13617 745 aa21.6■■□□□ 1.05
SS18-224ENST00000584083 PPP1R26Q5T8A7 1209 aaPredicted RBP21.6■■□□□ 1.05
SS18-224ENST00000584083 CLEC20AQ6ZU45 233 aa21.6■■□□□ 1.05
SS18-224ENST00000584083 CPA6Q8N4T0 437 aa21.6■■□□□ 1.05
SS18-224ENST00000584083 OSCP1Q8WVF1 389 aa21.6■■□□□ 1.05
SS18-224ENST00000584083 ATP2A3Q93084 1043 aa21.6■■□□□ 1.05
SS18-224ENST00000584083 TMEM176AQ96HP8 235 aa21.6■■□□□ 1.05
SS18-224ENST00000584083 SRRTQ9BXP5 876 aaKnown RBP21.6■■□□□ 1.05
SS18-224ENST00000584083 CPQQ9Y646 472 aa21.6■■□□□ 1.05
SS18-224ENST00000584083 OTOL1A6NHN0 477 aaPredicted RBP21.59■■□□□ 1.05
SS18-224ENST00000584083 PROB1E7EW31 1015 aa21.59■■□□□ 1.05
SS18-224ENST00000584083 FGFR1OPO95684 399 aaKnown RBP21.59■■□□□ 1.05
SS18-224ENST00000584083 TCF3P15923 654 aa21.59■■□□□ 1.05
SS18-224ENST00000584083 RAD23BP54727 409 aa21.59■■□□□ 1.05
SS18-224ENST00000584083 YWHAEP62258 255 aaKnown RBP21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms