RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 IPO7O95373 1038 aaKnown RBP12.29□□□□□ -0.44
CDRT1-207ENST00000583965 PAPLNO95428 1278 aa12.29□□□□□ -0.44
CDRT1-207ENST00000583965 LCA5LO95447 670 aa12.29□□□□□ -0.44
CDRT1-207ENST00000583965 ATF6P18850 670 aa12.29□□□□□ -0.44
CDRT1-207ENST00000583965 GABRB2P47870 512 aa12.29□□□□□ -0.44
CDRT1-207ENST00000583965 CDR1P51861 262 aa12.29□□□□□ -0.44
CDRT1-207ENST00000583965 CCZ1BP86790 482 aa12.29□□□□□ -0.44
CDRT1-207ENST00000583965 CCZ1P86791 482 aaPredicted RBP12.29□□□□□ -0.44
CDRT1-207ENST00000583965 C1QBPQ07021 282 aaKnown RBP12.29□□□□□ -0.44
CDRT1-207ENST00000583965 TWF1Q12792 350 aa12.29□□□□□ -0.44
CDRT1-207ENST00000583965 DDR2Q16832 855 aa12.29□□□□□ -0.44
CDRT1-207ENST00000583965 C10orf76Q5T2E6 689 aa12.29□□□□□ -0.44
CDRT1-207ENST00000583965 PMF1Q6P1K2 205 aa12.29□□□□□ -0.44
CDRT1-207ENST00000583965 ALKBH5Q6P6C2 394 aaKnown RBP12.29□□□□□ -0.44
CDRT1-207ENST00000583965 DENND5BQ6ZUT9 1274 aa12.29□□□□□ -0.44
CDRT1-207ENST00000583965 TMEM110Q86TL2 294 aa12.29□□□□□ -0.44
CDRT1-207ENST00000583965 ERICH1Q86X53 443 aa12.29□□□□□ -0.44
CDRT1-207ENST00000583965 PHF13Q86YI8 300 aaPredicted RBP12.29□□□□□ -0.44
CDRT1-207ENST00000583965 NUP93Q8N1F7 819 aa12.29□□□□□ -0.44
CDRT1-207ENST00000583965 SCML4Q8N228 414 aa12.29□□□□□ -0.44
CDRT1-207ENST00000583965 ELMOD1Q8N336 334 aa12.29□□□□□ -0.44
CDRT1-207ENST00000583965 DEFB123Q8N688 67 aa12.29□□□□□ -0.44
CDRT1-207ENST00000583965 IPO4Q8TEX9 1081 aaKnown RBP12.29□□□□□ -0.44
CDRT1-207ENST00000583965 CPA5Q8WXQ8 436 aa12.29□□□□□ -0.44
CDRT1-207ENST00000583965 PPP1R13BQ96KQ4 1090 aa12.29□□□□□ -0.44
CDRT1-207ENST00000583965 ISCUQ9H1K1 167 aa12.29□□□□□ -0.44
CDRT1-207ENST00000583965 FBXO44Q9H4M3 255 aa12.29□□□□□ -0.44
CDRT1-207ENST00000583965 LRRC4Q9HBW1 653 aa12.29□□□□□ -0.44
CDRT1-207ENST00000583965 ST7Q9NRC1 585 aa12.29□□□□□ -0.44
CDRT1-207ENST00000583965 CYTH4Q9UIA0 394 aa12.29□□□□□ -0.44
CDRT1-207ENST00000583965 NAGPAQ9UK23 515 aa12.29□□□□□ -0.44
CDRT1-207ENST00000583965 STRIP2Q9ULQ0 834 aa12.29□□□□□ -0.44
CDRT1-207ENST00000583965 DENND4AQ7Z401 1863 aa12.29□□□□□ -0.44
CDRT1-207ENST00000583965 SOWAHDA6NJG2 315 aa12.28□□□□□ -0.44
CDRT1-207ENST00000583965 SPDYE4A6NLX3 237 aa12.28□□□□□ -0.44
CDRT1-207ENST00000583965 SLC38A8A6NNN8 435 aa12.28□□□□□ -0.44
CDRT1-207ENST00000583965 EIF3CLB5ME19 914 aaKnown RBP12.28□□□□□ -0.44
CDRT1-207ENST00000583965 TULP2O00295 520 aa12.28□□□□□ -0.44
CDRT1-207ENST00000583965 ZNF500O60304 480 aaPredicted RBP12.28□□□□□ -0.44
CDRT1-207ENST00000583965 XYLBO75191 536 aa12.28□□□□□ -0.44
CDRT1-207ENST00000583965 SOAT2O75908 522 aa12.28□□□□□ -0.44
CDRT1-207ENST00000583965 FBXO21O94952 628 aa12.28□□□□□ -0.44
CDRT1-207ENST00000583965 NDUFA10O95299 355 aa12.28□□□□□ -0.44
CDRT1-207ENST00000583965 CALB1P05937 261 aa12.28□□□□□ -0.44
CDRT1-207ENST00000583965 HOXB8P17481 243 aaPredicted RBP12.28□□□□□ -0.44
CDRT1-207ENST00000583965 MMP8P22894 467 aa12.28□□□□□ -0.44
CDRT1-207ENST00000583965 MSNP26038 577 aaKnown RBP12.28□□□□□ -0.44
CDRT1-207ENST00000583965 GPR15P49685 360 aa12.28□□□□□ -0.44
CDRT1-207ENST00000583965 RGS7P49802 495 aa12.28□□□□□ -0.44
CDRT1-207ENST00000583965 SLC5A3P53794 718 aa12.28□□□□□ -0.44
CDRT1-207ENST00000583965 GSCP56915 257 aaPredicted RBP12.28□□□□□ -0.44
CDRT1-207ENST00000583965 GFPT1Q06210 699 aaPredicted RBP12.28□□□□□ -0.44
CDRT1-207ENST00000583965 ADAM15Q13444 863 aa12.28□□□□□ -0.44
CDRT1-207ENST00000583965 COL19A1Q14993 1142 aa12.28□□□□□ -0.44
CDRT1-207ENST00000583965 SPA17Q15506 151 aa12.28□□□□□ -0.44
CDRT1-207ENST00000583965 PTPN20Q4JDL3 420 aa12.28□□□□□ -0.44
CDRT1-207ENST00000583965 CCDC122Q5T0U0 273 aa12.28□□□□□ -0.44
CDRT1-207ENST00000583965 LLGL2Q6P1M3 1020 aa12.28□□□□□ -0.44
CDRT1-207ENST00000583965 ZDHHC17Q8IUH5 632 aa12.28□□□□□ -0.44
CDRT1-207ENST00000583965 SIX6OS1Q8N1H7 587 aa12.28□□□□□ -0.44
CDRT1-207ENST00000583965 CMASQ8NFW8 434 aaPredicted RBP12.28□□□□□ -0.44
CDRT1-207ENST00000583965 PSMG2Q969U7 264 aa12.28□□□□□ -0.44
CDRT1-207ENST00000583965 TRIM11Q96F44 468 aa12.28□□□□□ -0.44
CDRT1-207ENST00000583965 TRMT2BQ96GJ1 504 aaKnown RBP12.28□□□□□ -0.44
CDRT1-207ENST00000583965 ZNF512Q96ME7 567 aaPredicted RBP12.28□□□□□ -0.44
CDRT1-207ENST00000583965 CPXM1Q96SM3 734 aa12.28□□□□□ -0.44
CDRT1-207ENST00000583965 EIF3CQ99613 913 aaKnown RBP12.28□□□□□ -0.44
CDRT1-207ENST00000583965 CDX2Q99626 313 aaPredicted RBP12.28□□□□□ -0.44
CDRT1-207ENST00000583965 TTLL2Q9BWV7 592 aa12.28□□□□□ -0.44
CDRT1-207ENST00000583965 IGFLR1Q9H665 355 aa12.28□□□□□ -0.44
CDRT1-207ENST00000583965 SYNCQ9H7C4 482 aa12.28□□□□□ -0.44
CDRT1-207ENST00000583965 SFXN1Q9H9B4 322 aa12.28□□□□□ -0.44
CDRT1-207ENST00000583965 LUC7LQ9NQ29 371 aaKnown RBP12.28□□□□□ -0.44
CDRT1-207ENST00000583965 CNGB3Q9NQW8 809 aa12.28□□□□□ -0.44
CDRT1-207ENST00000583965 KCND1Q9NSA2 647 aa12.28□□□□□ -0.44
CDRT1-207ENST00000583965 IL37Q9NZH6 218 aa12.28□□□□□ -0.44
CDRT1-207ENST00000583965 UXTQ9UBK9 157 aaPredicted RBP12.28□□□□□ -0.44
CDRT1-207ENST00000583965 NENFQ9UMX5 172 aa12.28□□□□□ -0.44
CDRT1-207ENST00000583965 EPN1Q9Y6I3 576 aaPredicted RBP12.28□□□□□ -0.44
CDRT1-207ENST00000583965 USP3Q9Y6I4 520 aa12.28□□□□□ -0.44
CDRT1-207ENST00000583965 DOCK8Q8NF50 2099 aa12.28□□□□□ -0.44
CDRT1-207ENST00000583965 NUP210Q8TEM1 1887 aaPredicted RBP12.27□□□□□ -0.44
CDRT1-207ENST00000583965 FAM92AA1XBS5 289 aa12.27□□□□□ -0.45
CDRT1-207ENST00000583965 E5RJQ4 531 aa12.27□□□□□ -0.45
CDRT1-207ENST00000583965 SART1O43290 800 aaKnown RBP12.27□□□□□ -0.45
CDRT1-207ENST00000583965 GLP2RO95838 553 aa12.27□□□□□ -0.45
CDRT1-207ENST00000583965 FTLP02792 175 aaPredicted RBP12.27□□□□□ -0.45
CDRT1-207ENST00000583965 MYBL1P10243 752 aa12.27□□□□□ -0.45
CDRT1-207ENST00000583965 GTF2F1P35269 517 aaKnown RBP eCLIP12.27□□□□□ -0.45
CDRT1-207ENST00000583965 SCNN1AP37088 669 aa12.27□□□□□ -0.45
CDRT1-207ENST00000583965 TKTL1P51854 596 aa12.27□□□□□ -0.45
CDRT1-207ENST00000583965 ADIGQ0VDE8 80 aa12.27□□□□□ -0.45
CDRT1-207ENST00000583965 ZNF268Q14587 947 aaPredicted RBP12.27□□□□□ -0.45
CDRT1-207ENST00000583965 TAF12Q16514 161 aa12.27□□□□□ -0.45
CDRT1-207ENST00000583965 CTC1Q2NKJ3 1217 aa12.27□□□□□ -0.45
CDRT1-207ENST00000583965 SDHAF4Q5VUM1 108 aa12.27□□□□□ -0.45
CDRT1-207ENST00000583965 RAD9BQ6WBX8 426 aa12.27□□□□□ -0.45
CDRT1-207ENST00000583965 Q7L0L9 218 aa12.27□□□□□ -0.45
CDRT1-207ENST00000583965 MON1BQ7L1V2 547 aa12.27□□□□□ -0.45
CDRT1-207ENST00000583965 MCOLN2Q8IZK6 566 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms