RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 ZDHHC11BP0C7U3 371 aa10.5□□□□□ -0.73
SKA2-208ENST00000583927 CD44P16070 742 aaKnown RBP10.5□□□□□ -0.73
SKA2-208ENST00000583927 CD72P21854 359 aa10.5□□□□□ -0.73
SKA2-208ENST00000583927 YWHAQP27348 245 aa10.5□□□□□ -0.73
SKA2-208ENST00000583927 CTHP32929 405 aa10.5□□□□□ -0.73
SKA2-208ENST00000583927 ANP32AP39687 249 aaKnown RBP10.5□□□□□ -0.73
SKA2-208ENST00000583927 MRE11P49959 708 aa10.5□□□□□ -0.73
SKA2-208ENST00000583927 TUBP50607 506 aa10.5□□□□□ -0.73
SKA2-208ENST00000583927 CACNA2D1P54289 1103 aa10.5□□□□□ -0.73
SKA2-208ENST00000583927 MARSP56192 900 aaKnown RBP10.5□□□□□ -0.73
SKA2-208ENST00000583927 USP46P62068 366 aa10.5□□□□□ -0.73
SKA2-208ENST00000583927 SLC7A9P82251 487 aa10.5□□□□□ -0.73
SKA2-208ENST00000583927 UBXN2BQ14CS0 331 aa10.5□□□□□ -0.73
SKA2-208ENST00000583927 PDGFRLQ15198 375 aa10.5□□□□□ -0.73
SKA2-208ENST00000583927 ZNF77Q15935 545 aa10.5□□□□□ -0.73
SKA2-208ENST00000583927 ITPRIPL2Q3MIP1 535 aa10.5□□□□□ -0.73
SKA2-208ENST00000583927 SPOPLQ6IQ16 392 aa10.5□□□□□ -0.73
SKA2-208ENST00000583927 ACOT1Q86TX2 421 aa10.5□□□□□ -0.73
SKA2-208ENST00000583927 SYNPOQ8N3V7 929 aa10.5□□□□□ -0.73
SKA2-208ENST00000583927 STKLD1Q8NE28 680 aa10.5□□□□□ -0.73
SKA2-208ENST00000583927 WHAMMQ8TF30 809 aa10.5□□□□□ -0.73
SKA2-208ENST00000583927 FAM3CQ92520 227 aa10.5□□□□□ -0.73
SKA2-208ENST00000583927 EEF2KMTQ96G04 330 aa10.5□□□□□ -0.73
SKA2-208ENST00000583927 SLC22A12Q96S37 553 aa10.5□□□□□ -0.73
SKA2-208ENST00000583927 CHRDQ9H2X0 955 aa10.5□□□□□ -0.73
SKA2-208ENST00000583927 KIAA1468Q9P260 1216 aa10.5□□□□□ -0.73
SKA2-208ENST00000583927 CCL26Q9Y258 94 aa10.5□□□□□ -0.73
SKA2-208ENST00000583927 EP300Q09472 2414 aaPredicted RBP10.49□□□□□ -0.73
SKA2-208ENST00000583927 GVINP1Q7Z2Y8 2422 aa10.49□□□□□ -0.73
SKA2-208ENST00000583927 C2orf78A6NCI8 922 aa10.49□□□□□ -0.73
SKA2-208ENST00000583927 SPECC1L-ADORA2AF8WAN1 911 aa10.49□□□□□ -0.73
SKA2-208ENST00000583927 P4HA2O15460 535 aa10.49□□□□□ -0.73
SKA2-208ENST00000583927 AP1G2O75843 785 aa10.49□□□□□ -0.73
SKA2-208ENST00000583927 GNA14O95837 355 aa10.49□□□□□ -0.73
SKA2-208ENST00000583927 CKMP06732 381 aa10.49□□□□□ -0.73
SKA2-208ENST00000583927 CHRNB1P11230 501 aa10.49□□□□□ -0.73
SKA2-208ENST00000583927 HDCP19113 662 aa10.49□□□□□ -0.73
SKA2-208ENST00000583927 AMPD2Q01433 879 aa10.49□□□□□ -0.73
SKA2-208ENST00000583927 TAF10Q12962 218 aa10.49□□□□□ -0.73
SKA2-208ENST00000583927 RUNX3Q13761 415 aa10.49□□□□□ -0.73
SKA2-208ENST00000583927 CBWD6Q4V339 395 aa10.49□□□□□ -0.73
SKA2-208ENST00000583927 WDR44Q5JSH3 913 aa10.49□□□□□ -0.73
SKA2-208ENST00000583927 CBWD3Q5JTY5 395 aa10.49□□□□□ -0.73
SKA2-208ENST00000583927 DGKKQ5KSL6 1271 aa10.49□□□□□ -0.73
SKA2-208ENST00000583927 CBWD5Q5RIA9 395 aa10.49□□□□□ -0.73
SKA2-208ENST00000583927 SMYD5Q6GMV2 418 aa10.49□□□□□ -0.73
SKA2-208ENST00000583927 MAML2Q8IZL2 1156 aaPredicted RBP10.49□□□□□ -0.73
SKA2-208ENST00000583927 ZNF276Q8N554 614 aa10.49□□□□□ -0.73
SKA2-208ENST00000583927 ZMIZ2Q8NF64 920 aa10.49□□□□□ -0.73
SKA2-208ENST00000583927 SLC2A14Q8TDB8 520 aa10.49□□□□□ -0.73
SKA2-208ENST00000583927 OSCP1Q8WVF1 389 aa10.49□□□□□ -0.73
SKA2-208ENST00000583927 NELL1Q92832 810 aa10.49□□□□□ -0.73
SKA2-208ENST00000583927 SEMA4DQ92854 862 aa10.49□□□□□ -0.73
SKA2-208ENST00000583927 CYP2S1Q96SQ9 504 aa10.49□□□□□ -0.73
SKA2-208ENST00000583927 KCNK16Q96T55 309 aa10.49□□□□□ -0.73
SKA2-208ENST00000583927 SMOQ99835 787 aa10.49□□□□□ -0.73
SKA2-208ENST00000583927 FAM126AQ9BYI3 521 aaPredicted RBP10.49□□□□□ -0.73
SKA2-208ENST00000583927 FBXO44Q9H4M3 255 aa10.49□□□□□ -0.73
SKA2-208ENST00000583927 HPS4Q9NQG7 708 aa10.49□□□□□ -0.73
SKA2-208ENST00000583927 PRMT8Q9NR22 394 aaPredicted RBP10.49□□□□□ -0.73
SKA2-208ENST00000583927 GKN1Q9NS71 199 aa10.49□□□□□ -0.73
SKA2-208ENST00000583927 GTSE1Q9NYZ3 720 aa10.49□□□□□ -0.73
SKA2-208ENST00000583927 HMGXB4Q9UGU5 601 aa10.49□□□□□ -0.73
SKA2-208ENST00000583927 SPTBN4Q9H254 2564 aa10.49□□□□□ -0.73
SKA2-208ENST00000583927 DCHS1Q96JQ0 3298 aa10.48□□□□□ -0.73
SKA2-208ENST00000583927 LRRN2O75325 713 aa10.48□□□□□ -0.73
SKA2-208ENST00000583927 CLSTN1O94985 981 aa10.48□□□□□ -0.73
SKA2-208ENST00000583927 PAPSS2O95340 614 aaPredicted RBP10.48□□□□□ -0.73
SKA2-208ENST00000583927 FAM200BP0CF97 657 aa10.48□□□□□ -0.73
SKA2-208ENST00000583927 TBXAS1P24557 533 aaPredicted RBP10.48□□□□□ -0.73
SKA2-208ENST00000583927 FMO5P49326 533 aa10.48□□□□□ -0.73
SKA2-208ENST00000583927 KPNA1P52294 538 aaPredicted RBP10.48□□□□□ -0.73
SKA2-208ENST00000583927 SLC5A3P53794 718 aa10.48□□□□□ -0.73
SKA2-208ENST00000583927 YWHAEP62258 255 aaKnown RBP10.48□□□□□ -0.73
SKA2-208ENST00000583927 PAK1Q13153 545 aa10.48□□□□□ -0.73
SKA2-208ENST00000583927 CCINQ13939 588 aa10.48□□□□□ -0.73
SKA2-208ENST00000583927 LRRC32Q14392 662 aa10.48□□□□□ -0.73
SKA2-208ENST00000583927 MTF1Q14872 753 aa10.48□□□□□ -0.73
SKA2-208ENST00000583927 TCERG1LQ5VWI1 586 aa10.48□□□□□ -0.73
SKA2-208ENST00000583927 CC2D1AQ6P1N0 951 aaPredicted RBP10.48□□□□□ -0.73
SKA2-208ENST00000583927 ZC3H14Q6PJT7 736 aaKnown RBP10.48□□□□□ -0.73
SKA2-208ENST00000583927 CLEC20AQ6ZU45 233 aa10.48□□□□□ -0.73
SKA2-208ENST00000583927 ALYREFQ86V81 257 aaKnown RBP10.48□□□□□ -0.73
SKA2-208ENST00000583927 DDX42Q86XP3 938 aaKnown RBP eCLIP10.48□□□□□ -0.73
SKA2-208ENST00000583927 ARL14EPQ8N8R7 260 aaPredicted RBP10.48□□□□□ -0.73
SKA2-208ENST00000583927 C12orf29Q8N999 325 aa10.48□□□□□ -0.73
SKA2-208ENST00000583927 RIN3Q8TB24 985 aa10.48□□□□□ -0.73
SKA2-208ENST00000583927 NELFBQ8WX92 580 aa10.48□□□□□ -0.73
SKA2-208ENST00000583927 ATP2A3Q93084 1043 aa10.48□□□□□ -0.73
SKA2-208ENST00000583927 EXOC4Q96A65 974 aa10.48□□□□□ -0.73
SKA2-208ENST00000583927 ELMO3Q96BJ8 720 aa10.48□□□□□ -0.73
SKA2-208ENST00000583927 CYFIP2Q96F07 1278 aa10.48□□□□□ -0.73
SKA2-208ENST00000583927 ZFYVE19Q96K21 471 aa10.48□□□□□ -0.73
SKA2-208ENST00000583927 TWNKQ96RR1 684 aa10.48□□□□□ -0.73
SKA2-208ENST00000583927 PHOX2BQ99453 314 aa10.48□□□□□ -0.73
SKA2-208ENST00000583927 MED10Q9BTT4 135 aa10.48□□□□□ -0.73
SKA2-208ENST00000583927 UBXN6Q9BZV1 441 aa10.48□□□□□ -0.73
SKA2-208ENST00000583927 SMG9Q9H0W8 520 aaKnown RBP10.48□□□□□ -0.73
SKA2-208ENST00000583927 KRT82Q9NSB4 513 aa10.48□□□□□ -0.73
SKA2-208ENST00000583927 CISHQ9NSE2 258 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms