RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 KRT82Q9NSB4 513 aa9.7□□□□□ -0.86
CASC3-209ENST00000583902 TRMT1Q9NXH9 659 aaKnown RBP9.7□□□□□ -0.86
CASC3-209ENST00000583902 CACNG4Q9UBN1 327 aa9.7□□□□□ -0.86
CASC3-209ENST00000583902 ASB3Q9Y575 518 aa9.7□□□□□ -0.86
CASC3-209ENST00000583902 PAXBP1Q9Y5B6 917 aa9.7□□□□□ -0.86
CASC3-209ENST00000583902 NME7Q9Y5B8 376 aa9.7□□□□□ -0.86
CASC3-209ENST00000583902 TCRBV5S1A1TA0A578 114 aa9.69□□□□□ -0.86
CASC3-209ENST00000583902 CTAGE9A4FU28 777 aa9.69□□□□□ -0.86
CASC3-209ENST00000583902 SOBPA7XYQ1 873 aa9.69□□□□□ -0.86
CASC3-209ENST00000583902 TMCO5BA8MYB1 307 aa9.69□□□□□ -0.86
CASC3-209ENST00000583902 H3BNC9 293 aa9.69□□□□□ -0.86
CASC3-209ENST00000583902 HSF2BPO75031 334 aa9.69□□□□□ -0.86
CASC3-209ENST00000583902 HAPLN1P10915 354 aaPredicted RBP9.69□□□□□ -0.86
CASC3-209ENST00000583902 CCDC130P13994 396 aa9.69□□□□□ -0.86
CASC3-209ENST00000583902 HOXB1P14653 301 aaPredicted RBP9.69□□□□□ -0.86
CASC3-209ENST00000583902 ABCB4P21439 1286 aa9.69□□□□□ -0.86
CASC3-209ENST00000583902 ELF1P32519 619 aa9.69□□□□□ -0.86
CASC3-209ENST00000583902 GRIK1P39086 918 aa9.69□□□□□ -0.86
CASC3-209ENST00000583902 MRPS5P82675 430 aaKnown RBP9.69□□□□□ -0.86
CASC3-209ENST00000583902 PTP4A2Q12974 167 aa9.69□□□□□ -0.86
CASC3-209ENST00000583902 PTPN20Q4JDL3 420 aa9.69□□□□□ -0.86
CASC3-209ENST00000583902 SLC39A12Q504Y0 691 aa9.69□□□□□ -0.86
CASC3-209ENST00000583902 ACBD5Q5T8D3 534 aaPredicted RBP9.69□□□□□ -0.86
CASC3-209ENST00000583902 PM20D1Q6GTS8 502 aa9.69□□□□□ -0.86
CASC3-209ENST00000583902 PMF1Q6P1K2 205 aa9.69□□□□□ -0.86
CASC3-209ENST00000583902 DCUN1D2Q6PH85 259 aa9.69□□□□□ -0.86
CASC3-209ENST00000583902 TMEM92Q6UXU6 159 aa9.69□□□□□ -0.86
CASC3-209ENST00000583902 MMS22LQ6ZRQ5 1243 aa9.69□□□□□ -0.86
CASC3-209ENST00000583902 SLFN11Q7Z7L1 901 aa9.69□□□□□ -0.86
CASC3-209ENST00000583902 TADA2BQ86TJ2 420 aa9.69□□□□□ -0.86
CASC3-209ENST00000583902 ITIH5Q86UX2 942 aa9.69□□□□□ -0.86
CASC3-209ENST00000583902 PIGZQ86VD9 579 aa9.69□□□□□ -0.86
CASC3-209ENST00000583902 LRRTM3Q86VH5 581 aa9.69□□□□□ -0.86
CASC3-209ENST00000583902 TMEM173Q86WV6 379 aaPredicted RBP9.69□□□□□ -0.86
CASC3-209ENST00000583902 XYLT1Q86Y38 959 aa9.69□□□□□ -0.86
CASC3-209ENST00000583902 PASD1Q8IV76 773 aa9.69□□□□□ -0.86
CASC3-209ENST00000583902 TPCN2Q8NHX9 752 aa9.69□□□□□ -0.86
CASC3-209ENST00000583902 UBA3Q8TBC4 463 aa9.69□□□□□ -0.86
CASC3-209ENST00000583902 RABGGTAQ92696 567 aa9.69□□□□□ -0.86
CASC3-209ENST00000583902 NUP85Q9BW27 656 aa9.69□□□□□ -0.86
CASC3-209ENST00000583902 PLEKHA4Q9H4M7 779 aa9.69□□□□□ -0.86
CASC3-209ENST00000583902 PLSCR2Q9NRY7 297 aa9.69□□□□□ -0.86
CASC3-209ENST00000583902 TAS2R14Q9NYV8 317 aa9.69□□□□□ -0.86
CASC3-209ENST00000583902 IL37Q9NZH6 218 aa9.69□□□□□ -0.86
CASC3-209ENST00000583902 UXTQ9UBK9 157 aaPredicted RBP9.69□□□□□ -0.86
CASC3-209ENST00000583902 RNF14Q9UBS8 474 aa9.69□□□□□ -0.86
CASC3-209ENST00000583902 ZMYM5Q9UJ78 669 aa9.69□□□□□ -0.86
CASC3-209ENST00000583902 STAP1Q9ULZ2 295 aa9.69□□□□□ -0.86
CASC3-209ENST00000583902 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.69□□□□□ -0.86
CASC3-209ENST00000583902 CDY1Q9Y6F8 540 aa9.69□□□□□ -0.86
CASC3-209ENST00000583902 USP3Q9Y6I4 520 aa9.69□□□□□ -0.86
CASC3-209ENST00000583902 GBF1Q92538 1859 aa9.68□□□□□ -0.86
CASC3-209ENST00000583902 FAM92AA1XBS5 289 aa9.68□□□□□ -0.86
CASC3-209ENST00000583902 CCDC66A2RUB6 948 aa9.68□□□□□ -0.86
CASC3-209ENST00000583902 MTMR11A4FU01 709 aa9.68□□□□□ -0.86
CASC3-209ENST00000583902 TMEM191CA6NGB0 347 aa9.68□□□□□ -0.86
CASC3-209ENST00000583902 F8W810 466 aa9.68□□□□□ -0.86
CASC3-209ENST00000583902 CES2O00748 559 aa9.68□□□□□ -0.86
CASC3-209ENST00000583902 FSCN2O14926 492 aa9.68□□□□□ -0.86
CASC3-209ENST00000583902 ATP2C2O75185 946 aa9.68□□□□□ -0.86
CASC3-209ENST00000583902 FGF19O95750 216 aa9.68□□□□□ -0.86
CASC3-209ENST00000583902 F9P00740 461 aa9.68□□□□□ -0.86
CASC3-209ENST00000583902 POU2F2P09086 479 aa9.68□□□□□ -0.86
CASC3-209ENST00000583902 CSH1P0DML2 217 aa9.68□□□□□ -0.86
CASC3-209ENST00000583902 CSH2P0DML3 217 aa9.68□□□□□ -0.86
CASC3-209ENST00000583902 PFKLP17858 780 aa9.68□□□□□ -0.86
CASC3-209ENST00000583902 BDNFP23560 247 aa9.68□□□□□ -0.86
CASC3-209ENST00000583902 RRM1P23921 792 aa9.68□□□□□ -0.86
CASC3-209ENST00000583902 IGFBP6P24592 240 aaPredicted RBP9.68□□□□□ -0.86
CASC3-209ENST00000583902 OR1D2P34982 312 aa9.68□□□□□ -0.86
CASC3-209ENST00000583902 PTPN9P43378 593 aa9.68□□□□□ -0.86
CASC3-209ENST00000583902 ALDH1A3P47895 512 aa9.68□□□□□ -0.86
CASC3-209ENST00000583902 AIF1P55008 147 aa9.68□□□□□ -0.86
CASC3-209ENST00000583902 MAP3K7CLP57077 242 aa9.68□□□□□ -0.86
CASC3-209ENST00000583902 GNG11P61952 73 aa9.68□□□□□ -0.86
CASC3-209ENST00000583902 TUBB4BP68371 445 aa9.68□□□□□ -0.86
CASC3-209ENST00000583902 ROR1Q01973 937 aa9.68□□□□□ -0.86
CASC3-209ENST00000583902 VEPH1Q14D04 833 aa9.68□□□□□ -0.86
CASC3-209ENST00000583902 PTPROQ16827 1216 aa9.68□□□□□ -0.86
CASC3-209ENST00000583902 PPP1R15BQ5SWA1 713 aa9.68□□□□□ -0.86
CASC3-209ENST00000583902 C9orf50Q5SZB4 431 aa9.68□□□□□ -0.86
CASC3-209ENST00000583902 LRRC38Q5VT99 294 aa9.68□□□□□ -0.86
CASC3-209ENST00000583902 TMC7Q7Z402 723 aa9.68□□□□□ -0.86
CASC3-209ENST00000583902 MON1AQ86VX9 555 aa9.68□□□□□ -0.86
CASC3-209ENST00000583902 NUP93Q8N1F7 819 aa9.68□□□□□ -0.86
CASC3-209ENST00000583902 TMEM130Q8N3G9 435 aa9.68□□□□□ -0.86
CASC3-209ENST00000583902 MRPL43Q8N983 215 aaKnown RBP9.68□□□□□ -0.86
CASC3-209ENST00000583902 LEMD2Q8NC56 503 aa9.68□□□□□ -0.86
CASC3-209ENST00000583902 PDZD8Q8NEN9 1154 aa9.68□□□□□ -0.86
CASC3-209ENST00000583902 SPPL3Q8TCT6 385 aa9.68□□□□□ -0.86
CASC3-209ENST00000583902 BCL7CQ8WUZ0 217 aaPredicted RBP9.68□□□□□ -0.86
CASC3-209ENST00000583902 MARVELD3Q96A59 401 aa9.68□□□□□ -0.86
CASC3-209ENST00000583902 CDCA3Q99618 268 aaPredicted RBP9.68□□□□□ -0.86
CASC3-209ENST00000583902 NAPGQ99747 312 aaPredicted RBP9.68□□□□□ -0.86
CASC3-209ENST00000583902 SMOQ99835 787 aa9.68□□□□□ -0.86
CASC3-209ENST00000583902 CLSTN3Q9BQT9 956 aa9.68□□□□□ -0.86
CASC3-209ENST00000583902 VN1R3Q9BXE9 311 aa9.68□□□□□ -0.86
CASC3-209ENST00000583902 PACSIN1Q9BY11 444 aa9.68□□□□□ -0.86
CASC3-209ENST00000583902 SLC28A3Q9HAS3 691 aa9.68□□□□□ -0.86
CASC3-209ENST00000583902 LMCD1Q9NZU5 365 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms