RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 GDE1Q9NZC3 331 aa9.83□□□□□ -0.84
UBBP4-201ENST00000583708 WDR35Q9P2L0 1181 aa9.83□□□□□ -0.84
UBBP4-201ENST00000583708 AJAP1Q9UKB5 411 aaPredicted RBP9.83□□□□□ -0.84
UBBP4-201ENST00000583708 SCML2Q9UQR0 700 aa9.83□□□□□ -0.84
UBBP4-201ENST00000583708 MTCL1Q9Y4B5 1905 aaKnown RBP9.83□□□□□ -0.84
UBBP4-201ENST00000583708 TSC2P49815 1807 aa9.82□□□□□ -0.84
UBBP4-201ENST00000583708 HHLA1C9JL84 531 aa9.82□□□□□ -0.84
UBBP4-201ENST00000583708 M0QYV0 167 aa9.82□□□□□ -0.84
UBBP4-201ENST00000583708 CLDN5O00501 218 aa9.82□□□□□ -0.84
UBBP4-201ENST00000583708 HCRTO43612 131 aa9.82□□□□□ -0.84
UBBP4-201ENST00000583708 NRDCO43847 1150 aa9.82□□□□□ -0.84
UBBP4-201ENST00000583708 MFAP3LO75121 409 aa9.82□□□□□ -0.84
UBBP4-201ENST00000583708 CYP1A1P04798 512 aaPredicted RBP9.82□□□□□ -0.84
UBBP4-201ENST00000583708 HMGA1P17096 107 aaKnown RBP9.82□□□□□ -0.84
UBBP4-201ENST00000583708 ATF6P18850 670 aa9.82□□□□□ -0.84
UBBP4-201ENST00000583708 GABRB2P47870 512 aa9.82□□□□□ -0.84
UBBP4-201ENST00000583708 TUBP50607 506 aa9.82□□□□□ -0.84
UBBP4-201ENST00000583708 MAPK8IP2Q13387 824 aaPredicted RBP9.82□□□□□ -0.84
UBBP4-201ENST00000583708 DDR2Q16832 855 aa9.82□□□□□ -0.84
UBBP4-201ENST00000583708 ARHGAP15Q53QZ3 475 aa9.82□□□□□ -0.84
UBBP4-201ENST00000583708 RARS2Q5T160 578 aaKnown RBP9.82□□□□□ -0.84
UBBP4-201ENST00000583708 KLHDC10Q6PID8 442 aa9.82□□□□□ -0.84
UBBP4-201ENST00000583708 PDZD4Q76G19 769 aaPredicted RBP9.82□□□□□ -0.84
UBBP4-201ENST00000583708 NOP9Q86U38 636 aaKnown RBP9.82□□□□□ -0.84
UBBP4-201ENST00000583708 PIGZQ86VD9 579 aa9.82□□□□□ -0.84
UBBP4-201ENST00000583708 TMTC1Q8IUR5 882 aa9.82□□□□□ -0.84
UBBP4-201ENST00000583708 CCDC170Q8IYT3 715 aa9.82□□□□□ -0.84
UBBP4-201ENST00000583708 PLCD3Q8N3E9 789 aa9.82□□□□□ -0.84
UBBP4-201ENST00000583708 IPO4Q8TEX9 1081 aaKnown RBP9.82□□□□□ -0.84
UBBP4-201ENST00000583708 CPLX3Q8WVH0 158 aa9.82□□□□□ -0.84
UBBP4-201ENST00000583708 NXPE3Q969Y0 559 aa9.82□□□□□ -0.84
UBBP4-201ENST00000583708 E2F7Q96AV8 911 aa9.82□□□□□ -0.84
UBBP4-201ENST00000583708 TRIM11Q96F44 468 aa9.82□□□□□ -0.84
UBBP4-201ENST00000583708 ZSWIM1Q9BR11 485 aa9.82□□□□□ -0.84
UBBP4-201ENST00000583708 SYT11Q9BT88 431 aa9.82□□□□□ -0.84
UBBP4-201ENST00000583708 LUC7LQ9NQ29 371 aaKnown RBP9.82□□□□□ -0.84
UBBP4-201ENST00000583708 TLR8Q9NR97 1041 aaKnown RBP9.82□□□□□ -0.84
UBBP4-201ENST00000583708 ASNSD1Q9NWL6 643 aa9.82□□□□□ -0.84
UBBP4-201ENST00000583708 TRPM5Q9NZQ8 1165 aa9.82□□□□□ -0.84
UBBP4-201ENST00000583708 PRKAG3Q9UGI9 489 aa9.82□□□□□ -0.84
UBBP4-201ENST00000583708 STRIP2Q9ULQ0 834 aa9.82□□□□□ -0.84
UBBP4-201ENST00000583708 COL4A4P53420 1690 aaPredicted RBP9.81□□□□□ -0.84
UBBP4-201ENST00000583708 CCL16O15467 120 aa9.81□□□□□ -0.84
UBBP4-201ENST00000583708 LINC01565O15544 149 aa9.81□□□□□ -0.84
UBBP4-201ENST00000583708 TBX10O75333 385 aa9.81□□□□□ -0.84
UBBP4-201ENST00000583708 RFPL2O75678 378 aa9.81□□□□□ -0.84
UBBP4-201ENST00000583708 ZBED1O96006 694 aa9.81□□□□□ -0.84
UBBP4-201ENST00000583708 RHOP08100 348 aa9.81□□□□□ -0.84
UBBP4-201ENST00000583708 ZDHHC11BP0C7U3 371 aa9.81□□□□□ -0.84
UBBP4-201ENST00000583708 MYBL1P10243 752 aa9.81□□□□□ -0.84
UBBP4-201ENST00000583708 UNGP13051 313 aaPredicted RBP9.81□□□□□ -0.84
UBBP4-201ENST00000583708 FECHP22830 423 aa9.81□□□□□ -0.84
UBBP4-201ENST00000583708 GTF2F1P35269 517 aaKnown RBP eCLIP9.81□□□□□ -0.84
UBBP4-201ENST00000583708 NSFP46459 744 aaKnown RBP9.81□□□□□ -0.84
UBBP4-201ENST00000583708 SLC5A3P53794 718 aa9.81□□□□□ -0.84
UBBP4-201ENST00000583708 FMO1Q01740 532 aa9.81□□□□□ -0.84
UBBP4-201ENST00000583708 CENPCQ03188 943 aa9.81□□□□□ -0.84
UBBP4-201ENST00000583708 C1QBPQ07021 282 aaKnown RBP9.81□□□□□ -0.84
UBBP4-201ENST00000583708 MTA1Q13330 715 aa9.81□□□□□ -0.84
UBBP4-201ENST00000583708 ORC1Q13415 861 aa9.81□□□□□ -0.84
UBBP4-201ENST00000583708 ZNF268Q14587 947 aaPredicted RBP9.81□□□□□ -0.84
UBBP4-201ENST00000583708 CCDC85BQ15834 202 aaPredicted RBP9.81□□□□□ -0.84
UBBP4-201ENST00000583708 CLEC16AQ2KHT3 1053 aa9.81□□□□□ -0.84
UBBP4-201ENST00000583708 EFHC1Q5JVL4 640 aa9.81□□□□□ -0.84
UBBP4-201ENST00000583708 TMC5Q6UXY8 1006 aa9.81□□□□□ -0.84
UBBP4-201ENST00000583708 TOGARAM2Q6ZUX3 1019 aa9.81□□□□□ -0.84
UBBP4-201ENST00000583708 OTOP3Q7RTS5 596 aa9.81□□□□□ -0.84
UBBP4-201ENST00000583708 ERICH1Q86X53 443 aa9.81□□□□□ -0.84
UBBP4-201ENST00000583708 PHF13Q86YI8 300 aaPredicted RBP9.81□□□□□ -0.84
UBBP4-201ENST00000583708 SIX6OS1Q8N1H7 587 aa9.81□□□□□ -0.84
UBBP4-201ENST00000583708 TXLNBQ8N3L3 684 aa9.81□□□□□ -0.84
UBBP4-201ENST00000583708 ZMIZ2Q8NF64 920 aa9.81□□□□□ -0.84
UBBP4-201ENST00000583708 UBA3Q8TBC4 463 aa9.81□□□□□ -0.84
UBBP4-201ENST00000583708 MRPS31Q92665 395 aaKnown RBP9.81□□□□□ -0.84
UBBP4-201ENST00000583708 GOLGA1Q92805 767 aa9.81□□□□□ -0.84
UBBP4-201ENST00000583708 SECISBP2LQ93073 1101 aaKnown RBP9.81□□□□□ -0.84
UBBP4-201ENST00000583708 ACSF2Q96CM8 615 aaPredicted RBP9.81□□□□□ -0.84
UBBP4-201ENST00000583708 C18orf8Q96DM3 657 aa9.81□□□□□ -0.84
UBBP4-201ENST00000583708 PPP1R13BQ96KQ4 1090 aa9.81□□□□□ -0.84
UBBP4-201ENST00000583708 KCNK16Q96T55 309 aa9.81□□□□□ -0.84
UBBP4-201ENST00000583708 LRRC3Q9BY71 257 aa9.81□□□□□ -0.84
UBBP4-201ENST00000583708 HAUS4Q9H6D7 363 aa9.81□□□□□ -0.84
UBBP4-201ENST00000583708 OLA1Q9NTK5 396 aaKnown RBP9.81□□□□□ -0.84
UBBP4-201ENST00000583708 ABHD10Q9NUJ1 306 aa9.81□□□□□ -0.84
UBBP4-201ENST00000583708 RRN3Q9NYV6 651 aa9.81□□□□□ -0.84
UBBP4-201ENST00000583708 THEGQ9P2T0 379 aa9.81□□□□□ -0.84
UBBP4-201ENST00000583708 LCMT1Q9UIC8 334 aa9.81□□□□□ -0.84
UBBP4-201ENST00000583708 MRPS23Q9Y3D9 190 aaKnown RBP9.81□□□□□ -0.84
UBBP4-201ENST00000583708 NR2E1Q9Y466 385 aa9.81□□□□□ -0.84
UBBP4-201ENST00000583708 GRXCR2A6NFK2 248 aa9.8□□□□□ -0.84
UBBP4-201ENST00000583708 MBTPS2O43462 519 aa9.8□□□□□ -0.84
UBBP4-201ENST00000583708 RTN2O75298 545 aa9.8□□□□□ -0.84
UBBP4-201ENST00000583708 CSPG5O95196 566 aa9.8□□□□□ -0.84
UBBP4-201ENST00000583708 F11P03951 625 aa9.8□□□□□ -0.84
UBBP4-201ENST00000583708 CALB1P05937 261 aa9.8□□□□□ -0.84
UBBP4-201ENST00000583708 MMEP08473 750 aa9.8□□□□□ -0.84
UBBP4-201ENST00000583708 RALAP11233 206 aa9.8□□□□□ -0.84
UBBP4-201ENST00000583708 CHRNB2P17787 502 aa9.8□□□□□ -0.84
UBBP4-201ENST00000583708 KCNA5P22460 613 aa9.8□□□□□ -0.84
UBBP4-201ENST00000583708 MMP8P22894 467 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms