RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 TAF11Q15544 211 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 LONRF1Q17RB8 773 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 SLC4A11Q8NBS3 891 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 PPHLN1Q8NEY8 458 aaKnown RBP6.09□□□□□ -1.43
RTTN-209ENST00000583043 TTC8Q8TAM2 541 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 RIN3Q8TB24 985 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 GDAP1Q8TB36 358 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 HDAC7Q8WUI4 952 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 CFAP36Q96G28 342 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 APOPT1Q96IL0 206 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 UROC1Q96N76 676 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 ACSS3Q9H6R3 686 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 LRRC40Q9H9A6 602 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 GPRC5DQ9NZD1 345 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 DDX20Q9UHI6 824 aaKnown RBP6.09□□□□□ -1.43
RTTN-209ENST00000583043 SLC15A5A6NIM6 579 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 CAND2O75155 1236 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 C4BPAP04003 597 aaKnown RBP6.09□□□□□ -1.43
RTTN-209ENST00000583043 MPOP05164 745 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 NQO1P15559 274 aaKnown RBP6.09□□□□□ -1.43
RTTN-209ENST00000583043 RGS2P41220 211 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 TPI1P60174 286 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 OTUD4Q01804 1114 aaKnown RBP6.09□□□□□ -1.43
RTTN-209ENST00000583043 SLC6A3Q01959 620 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 PARP6Q2NL67 630 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 CCDC153Q494R4 210 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 CYB5D1Q6P9G0 228 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 E2F7Q96AV8 911 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 UPF3AQ9H1J1 476 aaKnown RBP6.09□□□□□ -1.43
RTTN-209ENST00000583043 RAB6BQ9NRW1 208 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 SMARCAL1Q9NZC9 954 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 CPSF3Q9UKF6 684 aaKnown RBP6.09□□□□□ -1.43
RTTN-209ENST00000583043 AKAP11Q9UKA4 1901 aa6.09□□□□□ -1.44
RTTN-209ENST00000583043 UMODL1Q5DID0 1318 aa6.09□□□□□ -1.44
RTTN-209ENST00000583043 ABLIM1O14639 778 aa6.09□□□□□ -1.44
RTTN-209ENST00000583043 KCNN4O15554 427 aa6.09□□□□□ -1.44
RTTN-209ENST00000583043 TGDSO95455 350 aa6.09□□□□□ -1.44
RTTN-209ENST00000583043 PTPN4P29074 926 aa6.09□□□□□ -1.44
RTTN-209ENST00000583043 PPP6R3Q5H9R7 873 aaPredicted RBP6.09□□□□□ -1.44
RTTN-209ENST00000583043 B3GNT9Q6UX72 402 aa6.09□□□□□ -1.44
RTTN-209ENST00000583043 C16orf89Q6UX73 402 aa6.09□□□□□ -1.44
RTTN-209ENST00000583043 MON1BQ7L1V2 547 aa6.09□□□□□ -1.44
RTTN-209ENST00000583043 ANKS1BQ7Z6G8 1248 aa6.09□□□□□ -1.44
RTTN-209ENST00000583043 CCDC60Q8IWA6 550 aaPredicted RBP6.09□□□□□ -1.44
RTTN-209ENST00000583043 C18orf25Q96B23 403 aaPredicted RBP6.09□□□□□ -1.44
RTTN-209ENST00000583043 FAM167BQ9BTA0 163 aa6.09□□□□□ -1.44
RTTN-209ENST00000583043 CCDC28BQ9BUN5 200 aa6.09□□□□□ -1.44
RTTN-209ENST00000583043 SEMA4AQ9H3S1 761 aa6.09□□□□□ -1.44
RTTN-209ENST00000583043 SNX9Q9Y5X1 595 aa6.09□□□□□ -1.44
RTTN-209ENST00000583043 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.09□□□□□ -1.44
RTTN-209ENST00000583043 WTIPA6NIX2 430 aaPredicted RBP6.08□□□□□ -1.44
RTTN-209ENST00000583043 TRPC5OSA6NMA1 111 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 CASQ2O14958 399 aaPredicted RBP6.08□□□□□ -1.44
RTTN-209ENST00000583043 GPR182O15218 404 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 DHX15O43143 795 aaKnown RBP6.08□□□□□ -1.44
RTTN-209ENST00000583043 HOXA2O43364 376 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 FKBP6O75344 327 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 HOXB6P17509 224 aaKnown RBP6.08□□□□□ -1.44
RTTN-209ENST00000583043 BRD2P25440 801 aaKnown RBP6.08□□□□□ -1.44
RTTN-209ENST00000583043 DNAJB1P25685 340 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 TYK2P29597 1187 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 GOLGA7BQ2TAP0 167 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 NBPF12Q5TAG4 269 aaPredicted RBP6.08□□□□□ -1.44
RTTN-209ENST00000583043 TWF2Q6IBS0 349 aaKnown RBP6.08□□□□□ -1.44
RTTN-209ENST00000583043 GPATCH11Q8N954 259 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 USP13Q92995 863 aaPredicted RBP6.08□□□□□ -1.44
RTTN-209ENST00000583043 MRRFQ96E11 262 aaKnown RBP6.08□□□□□ -1.44
RTTN-209ENST00000583043 SCYL1Q96KG9 808 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 UBE2OQ9C0C9 1292 aaKnown RBP6.08□□□□□ -1.44
RTTN-209ENST00000583043 ELP3Q9H9T3 547 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 IL1RAPL1Q9NZN1 696 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 PCSK1NQ9UHG2 260 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 ZNF180Q9UJW8 692 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 TFR2Q9UP52 801 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 NAALADL1Q9UQQ1 740 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 PTCH2Q9Y6C5 1203 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 hCG_1818297A0A087WSY0 165 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 EEF2KO00418 725 aaKnown RBP6.08□□□□□ -1.44
RTTN-209ENST00000583043 FAM200BP0CF97 657 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 KDELR1P24390 212 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 SERPINB8P50452 374 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 INHBEP58166 350 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 ADRM1Q16186 407 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 SPANXN3Q5MJ09 141 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 GLIS3Q8NEA6 775 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 ACTL9Q8TC94 416 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 C7orf43Q8WVR3 580 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 TTC17Q96AE7 1141 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 C9orf72Q96LT7 481 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 MTMR12Q9C0I1 747 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 DCLRE1BQ9H816 532 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 METTL5Q9NRN9 209 aaKnown RBP6.08□□□□□ -1.44
RTTN-209ENST00000583043 KCNK4Q9NYG8 393 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 RNF181Q9P0P0 153 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 CACNA1SQ13698 1873 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 RASSF10A6NK89 507 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 PHF20L1A8MW92 1017 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 LGR5O75473 907 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 ODC1P11926 461 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 SULT1E1P49888 294 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms