RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 MAN2A1Q16706 1144 aa13.33□□□□□ -0.28
SMARCE1-218ENST00000582955 CWF19L1Q69YN2 538 aaKnown RBP13.33□□□□□ -0.28
SMARCE1-218ENST00000582955 ASTLQ6HA08 431 aaPredicted RBP13.33□□□□□ -0.28
SMARCE1-218ENST00000582955 TMEM270Q6UE05 265 aa13.33□□□□□ -0.28
SMARCE1-218ENST00000582955 TPRG1Q6ZUI0 275 aa13.33□□□□□ -0.28
SMARCE1-218ENST00000582955 ARL14EPQ8N8R7 260 aaPredicted RBP13.33□□□□□ -0.28
SMARCE1-218ENST00000582955 PDZD8Q8NEN9 1154 aa13.33□□□□□ -0.28
SMARCE1-218ENST00000582955 CSGALNACT1Q8TDX6 532 aa13.33□□□□□ -0.28
SMARCE1-218ENST00000582955 USP13Q92995 863 aaPredicted RBP13.33□□□□□ -0.28
SMARCE1-218ENST00000582955 LRRC3BQ96PB8 259 aa13.33□□□□□ -0.28
SMARCE1-218ENST00000582955 SLC22A12Q96S37 553 aa13.33□□□□□ -0.28
SMARCE1-218ENST00000582955 CYP2S1Q96SQ9 504 aa13.33□□□□□ -0.28
SMARCE1-218ENST00000582955 KIF9Q9HAQ2 790 aa13.33□□□□□ -0.28
SMARCE1-218ENST00000582955 HEBP1Q9NRV9 189 aa13.33□□□□□ -0.28
SMARCE1-218ENST00000582955 THG1LQ9NWX6 298 aaKnown RBP13.33□□□□□ -0.28
SMARCE1-218ENST00000582955 CCL26Q9Y258 94 aa13.33□□□□□ -0.28
SMARCE1-218ENST00000582955 NFE2L3Q9Y4A8 694 aa13.33□□□□□ -0.28
SMARCE1-218ENST00000582955 ZNF840PA6NDX5 716 aa13.32□□□□□ -0.28
SMARCE1-218ENST00000582955 KCNJ18B7U540 433 aa13.32□□□□□ -0.28
SMARCE1-218ENST00000582955 PES1O00541 588 aaKnown RBP13.32□□□□□ -0.28
SMARCE1-218ENST00000582955 CHADO15335 359 aa13.32□□□□□ -0.28
SMARCE1-218ENST00000582955 AVPR2P30518 371 aa13.32□□□□□ -0.28
SMARCE1-218ENST00000582955 CLCN5P51795 746 aa13.32□□□□□ -0.28
SMARCE1-218ENST00000582955 SLC8A3P57103 927 aa13.32□□□□□ -0.28
SMARCE1-218ENST00000582955 GCNT1Q02742 428 aa13.32□□□□□ -0.28
SMARCE1-218ENST00000582955 PRKCQQ04759 706 aa13.32□□□□□ -0.28
SMARCE1-218ENST00000582955 KCNJ12Q14500 433 aa13.32□□□□□ -0.28
SMARCE1-218ENST00000582955 GOLGA7BQ2TAP0 167 aa13.32□□□□□ -0.28
SMARCE1-218ENST00000582955 ARHGAP29Q52LW3 1261 aa13.32□□□□□ -0.28
SMARCE1-218ENST00000582955 SGO2Q562F6 1265 aa13.32□□□□□ -0.28
SMARCE1-218ENST00000582955 ARHGAP17Q68EM7 881 aa13.32□□□□□ -0.28
SMARCE1-218ENST00000582955 CAVIN1Q6NZI2 390 aaKnown RBP13.32□□□□□ -0.28
SMARCE1-218ENST00000582955 GBP6Q6ZN66 633 aa13.32□□□□□ -0.28
SMARCE1-218ENST00000582955 GPRIN1Q7Z2K8 1008 aa13.32□□□□□ -0.28
SMARCE1-218ENST00000582955 UBR7Q8N806 425 aa13.32□□□□□ -0.28
SMARCE1-218ENST00000582955 ENOX1Q8TC92 643 aaKnown RBP13.32□□□□□ -0.28
SMARCE1-218ENST00000582955 OVCA2Q8WZ82 227 aa13.32□□□□□ -0.28
SMARCE1-218ENST00000582955 ZFYVE19Q96K21 471 aa13.32□□□□□ -0.28
SMARCE1-218ENST00000582955 TUBGCP2Q9BSJ2 902 aa13.32□□□□□ -0.28
SMARCE1-218ENST00000582955 DUSP16Q9BY84 665 aa13.32□□□□□ -0.28
SMARCE1-218ENST00000582955 FBXO44Q9H4M3 255 aa13.32□□□□□ -0.28
SMARCE1-218ENST00000582955 UBE2TQ9NPD8 197 aaPredicted RBP13.32□□□□□ -0.28
SMARCE1-218ENST00000582955 PLSCR2Q9NRY7 297 aa13.32□□□□□ -0.28
SMARCE1-218ENST00000582955 SAMSN1Q9NSI8 373 aaKnown RBP13.32□□□□□ -0.28
SMARCE1-218ENST00000582955 COMMD8Q9NX08 183 aa13.32□□□□□ -0.28
SMARCE1-218ENST00000582955 GMIPQ9P107 970 aa13.32□□□□□ -0.28
SMARCE1-218ENST00000582955 TMEM63CQ9P1W3 806 aa13.32□□□□□ -0.28
SMARCE1-218ENST00000582955 HESX1Q9UBX0 185 aa13.32□□□□□ -0.28
SMARCE1-218ENST00000582955 CHORDC1Q9UHD1 332 aaPredicted RBP13.32□□□□□ -0.28
SMARCE1-218ENST00000582955 ZNF638Q14966 1978 aaKnown RBP13.32□□□□□ -0.28
SMARCE1-218ENST00000582955 ZDBF2Q9HCK1 2354 aa13.31□□□□□ -0.28
SMARCE1-218ENST00000582955 VDRP11473 427 aa13.31□□□□□ -0.28
SMARCE1-218ENST00000582955 KRT5P13647 590 aa13.31□□□□□ -0.28
SMARCE1-218ENST00000582955 PFKLP17858 780 aa13.31□□□□□ -0.28
SMARCE1-218ENST00000582955 SLC9A1P19634 815 aa13.31□□□□□ -0.28
SMARCE1-218ENST00000582955 AOC1P19801 751 aa13.31□□□□□ -0.28
SMARCE1-218ENST00000582955 ACO1P21399 889 aaKnown RBP13.31□□□□□ -0.28
SMARCE1-218ENST00000582955 CD72P21854 359 aa13.31□□□□□ -0.28
SMARCE1-218ENST00000582955 STARD6P59095 220 aa13.31□□□□□ -0.28
SMARCE1-218ENST00000582955 PLCB2Q00722 1185 aa13.31□□□□□ -0.28
SMARCE1-218ENST00000582955 ZNF268Q14587 947 aaPredicted RBP13.31□□□□□ -0.28
SMARCE1-218ENST00000582955 UBXN2BQ14CS0 331 aa13.31□□□□□ -0.28
SMARCE1-218ENST00000582955 EXOC3L4Q17RC7 722 aa13.31□□□□□ -0.28
SMARCE1-218ENST00000582955 VWA3BQ502W6 1294 aa13.31□□□□□ -0.28
SMARCE1-218ENST00000582955 PHLDB3Q6NSJ2 640 aa13.31□□□□□ -0.28
SMARCE1-218ENST00000582955 CC2D1AQ6P1N0 951 aaPredicted RBP13.31□□□□□ -0.28
SMARCE1-218ENST00000582955 TRIM65Q6PJ69 517 aa13.31□□□□□ -0.28
SMARCE1-218ENST00000582955 C11orf57Q6ZUT1 292 aaPredicted RBP13.31□□□□□ -0.28
SMARCE1-218ENST00000582955 TMEM105Q8N8V8 129 aa13.31□□□□□ -0.28
SMARCE1-218ENST00000582955 RBBP8NLQ8NC74 664 aaPredicted RBP13.31□□□□□ -0.28
SMARCE1-218ENST00000582955 TTC8Q8TAM2 541 aa13.31□□□□□ -0.28
SMARCE1-218ENST00000582955 KREMEN1Q96MU8 473 aa13.31□□□□□ -0.28
SMARCE1-218ENST00000582955 FOXQ1Q9C009 403 aa13.31□□□□□ -0.28
SMARCE1-218ENST00000582955 NDST4Q9H3R1 872 aa13.31□□□□□ -0.28
SMARCE1-218ENST00000582955 PNPLA8Q9NP80 782 aa13.31□□□□□ -0.28
SMARCE1-218ENST00000582955 TRPV5Q9NQA5 729 aa13.31□□□□□ -0.28
SMARCE1-218ENST00000582955 IL37Q9NZH6 218 aa13.31□□□□□ -0.28
SMARCE1-218ENST00000582955 TSPAN16Q9UKR8 245 aa13.31□□□□□ -0.28
SMARCE1-218ENST00000582955 PIAS3Q9Y6X2 628 aa13.31□□□□□ -0.28
SMARCE1-218ENST00000582955 ANAPC1Q9H1A4 1944 aa13.31□□□□□ -0.28
SMARCE1-218ENST00000582955 KANSL1LA0AUZ9 987 aa13.3□□□□□ -0.28
SMARCE1-218ENST00000582955 GTPBP10A4D1E9 387 aaKnown RBP13.3□□□□□ -0.28
SMARCE1-218ENST00000582955 HHLA1C9JL84 531 aa13.3□□□□□ -0.28
SMARCE1-218ENST00000582955 ARNTLO00327 626 aa13.3□□□□□ -0.28
SMARCE1-218ENST00000582955 PI15O43692 258 aa13.3□□□□□ -0.28
SMARCE1-218ENST00000582955 OAS1P00973 400 aaKnown RBP13.3□□□□□ -0.28
SMARCE1-218ENST00000582955 PAEPP09466 180 aa13.3□□□□□ -0.28
SMARCE1-218ENST00000582955 MBL2P11226 248 aaPredicted RBP13.3□□□□□ -0.28
SMARCE1-218ENST00000582955 EEF1GP26641 437 aaKnown RBP13.3□□□□□ -0.28
SMARCE1-218ENST00000582955 KPNA1P52294 538 aaPredicted RBP13.3□□□□□ -0.28
SMARCE1-218ENST00000582955 BCAT1P54687 386 aa13.3□□□□□ -0.28
SMARCE1-218ENST00000582955 MFAP3P55082 362 aa13.3□□□□□ -0.28
SMARCE1-218ENST00000582955 TYRO3Q06418 890 aa13.3□□□□□ -0.28
SMARCE1-218ENST00000582955 MTF1Q14872 753 aa13.3□□□□□ -0.28
SMARCE1-218ENST00000582955 TCP11X2Q5H9J9 407 aa13.3□□□□□ -0.28
SMARCE1-218ENST00000582955 HECTD3Q5T447 861 aa13.3□□□□□ -0.28
SMARCE1-218ENST00000582955 GJB7Q6PEY0 223 aa13.3□□□□□ -0.28
SMARCE1-218ENST00000582955 TTC30AQ86WT1 665 aa13.3□□□□□ -0.28
SMARCE1-218ENST00000582955 ANKRD52Q8NB46 1076 aa13.3□□□□□ -0.28
SMARCE1-218ENST00000582955 RIN3Q8TB24 985 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms