RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	IFT122	Q9HBG6	1241 aa		5.47	□□□□□ -1.53
MSI2-216	ENST00000582772	ZDHHC4	Q9NPG8	344 aa		5.47	□□□□□ -1.53
MSI2-216	ENST00000582772	ZNF302	Q9NR11	478 aa		5.47	□□□□□ -1.53
MSI2-216	ENST00000582772	HCN2	Q9UL51	889 aa		5.47	□□□□□ -1.53
MSI2-216	ENST00000582772	PCDHB11	Q9Y5F2	797 aa		5.47	□□□□□ -1.53
MSI2-216	ENST00000582772	PNMA6E	A0A0J9YXQ4	647 aa		5.46	□□□□□ -1.54
MSI2-216	ENST00000582772	CASTOR2	A6NHX0	329 aa		5.46	□□□□□ -1.54
MSI2-216	ENST00000582772	MYMK	A6NI61	221 aa		5.46	□□□□□ -1.54
MSI2-216	ENST00000582772	ZNF891	A8MT65	544 aa	Predicted RBP	5.46	□□□□□ -1.54
MSI2-216	ENST00000582772	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	5.46	□□□□□ -1.54
MSI2-216	ENST00000582772	TRIM38	O00635	465 aa		5.46	□□□□□ -1.54
MSI2-216	ENST00000582772	RIOK3	O14730	519 aa	Known RBP	5.46	□□□□□ -1.54
MSI2-216	ENST00000582772	ADAMTS3	O15072	1205 aa		5.46	□□□□□ -1.54
MSI2-216	ENST00000582772	CAPN5	O15484	640 aa	Predicted RBP	5.46	□□□□□ -1.54
MSI2-216	ENST00000582772	TRAPPC3	O43617	180 aa		5.46	□□□□□ -1.54
MSI2-216	ENST00000582772	ORC4	O43929	436 aa		5.46	□□□□□ -1.54
MSI2-216	ENST00000582772	VNN2	O95498	520 aa		5.46	□□□□□ -1.54
MSI2-216	ENST00000582772	CHGB	P05060	677 aa		5.46	□□□□□ -1.54
MSI2-216	ENST00000582772	GOLGA8H	P0CJ92	632 aa		5.46	□□□□□ -1.54
MSI2-216	ENST00000582772	GNAT2	P19087	354 aa		5.46	□□□□□ -1.54
MSI2-216	ENST00000582772	MEOX1	P50221	254 aa		5.46	□□□□□ -1.54
MSI2-216	ENST00000582772	C21orf59	P57076	290 aa		5.46	□□□□□ -1.54
MSI2-216	ENST00000582772	RPL10A	P62906	217 aa	Known RBP	5.46	□□□□□ -1.54
MSI2-216	ENST00000582772	DAB2	P98082	770 aa		5.46	□□□□□ -1.54
MSI2-216	ENST00000582772	FAM160A1	Q05DH4	1040 aa		5.46	□□□□□ -1.54
MSI2-216	ENST00000582772	PPARA	Q07869	468 aa		5.46	□□□□□ -1.54
MSI2-216	ENST00000582772	SART3	Q15020	963 aa	Known RBP	5.46	□□□□□ -1.54
MSI2-216	ENST00000582772	BMT2	Q1RMZ1	405 aa		5.46	□□□□□ -1.54
MSI2-216	ENST00000582772	ZNF630	Q2M218	657 aa	Predicted RBP	5.46	□□□□□ -1.54
MSI2-216	ENST00000582772	CRTC2	Q53ET0	693 aa	Predicted RBP	5.46	□□□□□ -1.54
MSI2-216	ENST00000582772	ASPRV1	Q53RT3	343 aa		5.46	□□□□□ -1.54
MSI2-216	ENST00000582772	BHLHB9	Q6PI77	547 aa		5.46	□□□□□ -1.54
MSI2-216	ENST00000582772	CD300LG	Q6UXG3	332 aa		5.46	□□□□□ -1.54
MSI2-216	ENST00000582772	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	5.46	□□□□□ -1.54
MSI2-216	ENST00000582772	ITIH5	Q86UX2	942 aa		5.46	□□□□□ -1.54
MSI2-216	ENST00000582772	SGMS1	Q86VZ5	419 aa		5.46	□□□□□ -1.54
MSI2-216	ENST00000582772	OR4C6	Q8NH72	309 aa		5.46	□□□□□ -1.54
MSI2-216	ENST00000582772	GPBAR1	Q8TDU6	330 aa		5.46	□□□□□ -1.54
MSI2-216	ENST00000582772	SKA1	Q96BD8	255 aa		5.46	□□□□□ -1.54
MSI2-216	ENST00000582772	FAM167A	Q96KS9	214 aa		5.46	□□□□□ -1.54
MSI2-216	ENST00000582772	BTBD1	Q9H0C5	482 aa		5.46	□□□□□ -1.54
MSI2-216	ENST00000582772	GDF3	Q9NR23	364 aa		5.46	□□□□□ -1.54
MSI2-216	ENST00000582772	DISC1	Q9NRI5	854 aa		5.46	□□□□□ -1.54
MSI2-216	ENST00000582772	HSFX1	Q9UBD0	423 aa		5.46	□□□□□ -1.54
MSI2-216	ENST00000582772	COPG2	Q9UBF2	871 aa		5.46	□□□□□ -1.54
MSI2-216	ENST00000582772	SEL1L	Q9UBV2	794 aa		5.46	□□□□□ -1.54
MSI2-216	ENST00000582772	STK17A	Q9UEE5	414 aa		5.46	□□□□□ -1.54
MSI2-216	ENST00000582772	FBXL5	Q9UKA1	691 aa		5.46	□□□□□ -1.54
MSI2-216	ENST00000582772	PCDHGB6	Q9Y5F9	930 aa		5.46	□□□□□ -1.54
MSI2-216	ENST00000582772	TNRC6A	Q8NDV7	1962 aa	Known RBP	5.46	□□□□□ -1.54
MSI2-216	ENST00000582772	IGKV6-21	A0A0C4DH24	114 aa		5.45	□□□□□ -1.54
MSI2-216	ENST00000582772	LY6G6E	A0A0G2JKS1	128 aa		5.45	□□□□□ -1.54
MSI2-216	ENST00000582772	BTBD18	B2RXH4	712 aa		5.45	□□□□□ -1.54
MSI2-216	ENST00000582772	MKRN2OS	H3BPM6	223 aa		5.45	□□□□□ -1.54
MSI2-216	ENST00000582772		H7C4K7	107 aa		5.45	□□□□□ -1.54
MSI2-216	ENST00000582772	PIK3CD	O00329	1044 aa		5.45	□□□□□ -1.54
MSI2-216	ENST00000582772	BACH1	O14867	736 aa		5.45	□□□□□ -1.54
MSI2-216	ENST00000582772	SYN3	O14994	580 aa		5.45	□□□□□ -1.54
MSI2-216	ENST00000582772	ZBTB5	O15062	677 aa		5.45	□□□□□ -1.54
MSI2-216	ENST00000582772	ZG16	O60844	167 aa		5.45	□□□□□ -1.54
MSI2-216	ENST00000582772	CCNE2	O96020	404 aa		5.45	□□□□□ -1.54
MSI2-216	ENST00000582772	INHBB	P09529	407 aa		5.45	□□□□□ -1.54
MSI2-216	ENST00000582772	TGM2	P21980	687 aa		5.45	□□□□□ -1.54
MSI2-216	ENST00000582772	GRIK1	P39086	918 aa		5.45	□□□□□ -1.54
MSI2-216	ENST00000582772	GRM5	P41594	1212 aa		5.45	□□□□□ -1.54
MSI2-216	ENST00000582772	REST	Q13127	1097 aa		5.45	□□□□□ -1.54
MSI2-216	ENST00000582772	DRP2	Q13474	957 aa		5.45	□□□□□ -1.54
MSI2-216	ENST00000582772	PCBP1	Q15365	356 aa	Known RBP eCLIP	5.45	□□□□□ -1.54
MSI2-216	ENST00000582772	MIIP	Q5JXC2	388 aa		5.45	□□□□□ -1.54
MSI2-216	ENST00000582772	BNC2	Q6ZN30	1099 aa	Predicted RBP	5.45	□□□□□ -1.54
MSI2-216	ENST00000582772	TMPRSS9	Q7Z410	1059 aa		5.45	□□□□□ -1.54
MSI2-216	ENST00000582772	ADAT2	Q7Z6V5	191 aa	Known RBP	5.45	□□□□□ -1.54
MSI2-216	ENST00000582772	TMEM150A	Q86TG1	271 aa		5.45	□□□□□ -1.54
MSI2-216	ENST00000582772	HACE1	Q8IYU2	909 aa		5.45	□□□□□ -1.54
MSI2-216	ENST00000582772	IFNL3	Q8IZI9	196 aa		5.45	□□□□□ -1.54
MSI2-216	ENST00000582772	ZNF579	Q8NAF0	562 aa	Known RBP	5.45	□□□□□ -1.54
MSI2-216	ENST00000582772	RDH13	Q8NBN7	331 aa		5.45	□□□□□ -1.54
MSI2-216	ENST00000582772	TPCN2	Q8NHX9	752 aa		5.45	□□□□□ -1.54
MSI2-216	ENST00000582772	MAPK15	Q8TD08	544 aa		5.45	□□□□□ -1.54
MSI2-216	ENST00000582772	GCNA	Q96QF7	691 aa		5.45	□□□□□ -1.54
MSI2-216	ENST00000582772	SDF4	Q9BRK5	362 aa		5.45	□□□□□ -1.54
MSI2-216	ENST00000582772	EIF2A	Q9BY44	585 aa	Known RBP	5.45	□□□□□ -1.54
MSI2-216	ENST00000582772	MFRP	Q9BY79	579 aa		5.45	□□□□□ -1.54
MSI2-216	ENST00000582772	ABCG4	Q9H172	646 aa		5.45	□□□□□ -1.54
MSI2-216	ENST00000582772	SLC6A17	Q9H1V8	727 aa		5.45	□□□□□ -1.54
MSI2-216	ENST00000582772	MRS2	Q9HD23	443 aa		5.45	□□□□□ -1.54
MSI2-216	ENST00000582772	ARHGEF4	Q9NR80	690 aa		5.45	□□□□□ -1.54
MSI2-216	ENST00000582772	KCNH7	Q9NS40	1196 aa		5.45	□□□□□ -1.54
MSI2-216	ENST00000582772	HES2	Q9Y543	173 aa		5.45	□□□□□ -1.54
MSI2-216	ENST00000582772		U3KQA8	63 aa		5.45	□□□□□ -1.54
MSI2-216	ENST00000582772	TRIP11	Q15643	1979 aa		5.45	□□□□□ -1.54
MSI2-216	ENST00000582772	CIT	O14578	2027 aa		5.45	□□□□□ -1.54
MSI2-216	ENST00000582772	GFRA2	O00451	464 aa		5.44	□□□□□ -1.54
MSI2-216	ENST00000582772	ZNF213	O14771	459 aa		5.44	□□□□□ -1.54
MSI2-216	ENST00000582772	PPP6R2	O75170	966 aa		5.44	□□□□□ -1.54
MSI2-216	ENST00000582772	CYP17A1	P05093	508 aa		5.44	□□□□□ -1.54
MSI2-216	ENST00000582772	VAV1	P15498	845 aa		5.44	□□□□□ -1.54
MSI2-216	ENST00000582772	ATP2B1	P20020	1258 aa		5.44	□□□□□ -1.54
MSI2-216	ENST00000582772	SMARCA1	P28370	1054 aa		5.44	□□□□□ -1.54
MSI2-216	ENST00000582772	AXL	P30530	894 aa		5.44	□□□□□ -1.54

Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms