RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 HVCN1Q96D96 273 aa11.03□□□□□ -0.64
SS18-221ENST00000582448 KLHL5Q96PQ7 755 aa11.03□□□□□ -0.64
SS18-221ENST00000582448 FAM193BQ96PV7 902 aaPredicted RBP11.03□□□□□ -0.64
SS18-221ENST00000582448 ACCSQ96QU6 501 aa11.03□□□□□ -0.64
SS18-221ENST00000582448 SH2D3AQ9BRG2 576 aa11.03□□□□□ -0.64
SS18-221ENST00000582448 FDXACB1Q9BRP7 624 aaPredicted RBP11.03□□□□□ -0.64
SS18-221ENST00000582448 EMILIN2Q9BXX0 1053 aa11.03□□□□□ -0.64
SS18-221ENST00000582448 SFXN1Q9H9B4 322 aa11.03□□□□□ -0.64
SS18-221ENST00000582448 ZFYVE1Q9HBF4 777 aa11.03□□□□□ -0.64
SS18-221ENST00000582448 TBC1D13Q9NVG8 400 aa11.03□□□□□ -0.64
SS18-221ENST00000582448 DNAJB4Q9UDY4 337 aa11.03□□□□□ -0.64
SS18-221ENST00000582448 CA14Q9ULX7 337 aa11.03□□□□□ -0.64
SS18-221ENST00000582448 PIN4Q9Y237 131 aaKnown RBP11.03□□□□□ -0.64
SS18-221ENST00000582448 R4GN57 208 aa11.03□□□□□ -0.64
SS18-221ENST00000582448 FAM95CA0A1B0GW59 222 aa11.02□□□□□ -0.65
SS18-221ENST00000582448 MEIS3P2A8K0S8 358 aa11.02□□□□□ -0.65
SS18-221ENST00000582448 TEX33O43247 280 aa11.02□□□□□ -0.65
SS18-221ENST00000582448 OFD1O75665 1012 aa11.02□□□□□ -0.65
SS18-221ENST00000582448 LMNAP02545 664 aaKnown RBP11.02□□□□□ -0.65
SS18-221ENST00000582448 EPB41P11171 864 aaKnown RBP11.02□□□□□ -0.65
SS18-221ENST00000582448 NMT1P30419 496 aaKnown RBP11.02□□□□□ -0.65
SS18-221ENST00000582448 CD97P48960 835 aa11.02□□□□□ -0.65
SS18-221ENST00000582448 SLC11A1P49279 550 aa11.02□□□□□ -0.65
SS18-221ENST00000582448 LRMPQ12912 555 aa11.02□□□□□ -0.65
SS18-221ENST00000582448 TBX2Q13207 712 aaPredicted RBP11.02□□□□□ -0.65
SS18-221ENST00000582448 DNTTIP2Q5QJE6 756 aaKnown RBP11.02□□□□□ -0.65
SS18-221ENST00000582448 HP1BP3Q5SSJ5 553 aaPredicted RBP11.02□□□□□ -0.65
SS18-221ENST00000582448 PLA2G4FQ68DD2 849 aa11.02□□□□□ -0.65
SS18-221ENST00000582448 DGLUCYQ7Z3D6 616 aa11.02□□□□□ -0.65
SS18-221ENST00000582448 ZNF280BQ86YH2 543 aa11.02□□□□□ -0.65
SS18-221ENST00000582448 ST13P5Q8NFI4 369 aaPredicted RBP11.02□□□□□ -0.65
SS18-221ENST00000582448 KIAA1524Q8TCG1 905 aa11.02□□□□□ -0.65
SS18-221ENST00000582448 FBF1Q8TES7 1133 aa11.02□□□□□ -0.65
SS18-221ENST00000582448 EZH1Q92800 747 aaPredicted RBP11.02□□□□□ -0.65
SS18-221ENST00000582448 RMDN1Q96DB5 314 aa11.02□□□□□ -0.65
SS18-221ENST00000582448 PANX2Q96RD6 677 aa11.02□□□□□ -0.65
SS18-221ENST00000582448 JPH2Q9BR39 696 aaPredicted RBP11.02□□□□□ -0.65
SS18-221ENST00000582448 NAA15Q9BXJ9 866 aaKnown RBP11.02□□□□□ -0.65
SS18-221ENST00000582448 KCTD10Q9H3F6 313 aa11.02□□□□□ -0.65
SS18-221ENST00000582448 NDST4Q9H3R1 872 aa11.02□□□□□ -0.65
SS18-221ENST00000582448 FAM105AQ9NUU6 356 aa11.02□□□□□ -0.65
SS18-221ENST00000582448 INTS13Q9NVM9 706 aa11.02□□□□□ -0.65
SS18-221ENST00000582448 ZNHIT6Q9NWK9 470 aaKnown RBP11.02□□□□□ -0.65
SS18-221ENST00000582448 ARMCX3Q9UH62 379 aaPredicted RBP11.02□□□□□ -0.65
SS18-221ENST00000582448 DUSP12Q9UNI6 340 aa11.02□□□□□ -0.65
SS18-221ENST00000582448 FRMD4BQ9Y2L6 1034 aa11.02□□□□□ -0.65
SS18-221ENST00000582448 FAN1Q9Y2M0 1017 aa11.02□□□□□ -0.65
SS18-221ENST00000582448 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.02□□□□□ -0.65
SS18-221ENST00000582448 DMDP11532 3685 aa11.02□□□□□ -0.65
SS18-221ENST00000582448 CCDC195A0A1B0GUA6 201 aa11.01□□□□□ -0.65
SS18-221ENST00000582448 MED19A0JLT2 244 aaPredicted RBP11.01□□□□□ -0.65
SS18-221ENST00000582448 TMEM150BA6NC51 233 aa11.01□□□□□ -0.65
SS18-221ENST00000582448 CCDC169A6NNP5 214 aa11.01□□□□□ -0.65
SS18-221ENST00000582448 STX10O60499 249 aa11.01□□□□□ -0.65
SS18-221ENST00000582448 NR3C1P04150 777 aa11.01□□□□□ -0.65
SS18-221ENST00000582448 ALDH2P05091 517 aa11.01□□□□□ -0.65
SS18-221ENST00000582448 DCNP07585 359 aaKnown RBP11.01□□□□□ -0.65
SS18-221ENST00000582448 CNPP09543 421 aaKnown RBP11.01□□□□□ -0.65
SS18-221ENST00000582448 TRIM21P19474 475 aaKnown RBP11.01□□□□□ -0.65
SS18-221ENST00000582448 PSMC2P35998 433 aaKnown RBP11.01□□□□□ -0.65
SS18-221ENST00000582448 PBX1P40424 430 aa11.01□□□□□ -0.65
SS18-221ENST00000582448 CLCN4P51793 760 aa11.01□□□□□ -0.65
SS18-221ENST00000582448 CASP5P51878 434 aa11.01□□□□□ -0.65
SS18-221ENST00000582448 NPEPPSP55786 919 aa11.01□□□□□ -0.65
SS18-221ENST00000582448 PEX3P56589 373 aa11.01□□□□□ -0.65
SS18-221ENST00000582448 MYBPC2Q14324 1141 aa11.01□□□□□ -0.65
SS18-221ENST00000582448 NOLC1Q14978 699 aaKnown RBP eCLIP11.01□□□□□ -0.65
SS18-221ENST00000582448 PPP2R5AQ15172 486 aa11.01□□□□□ -0.65
SS18-221ENST00000582448 PTPN14Q15678 1187 aa11.01□□□□□ -0.65
SS18-221ENST00000582448 ARMCX5Q6P1M9 558 aa11.01□□□□□ -0.65
SS18-221ENST00000582448 CATSPER4Q7RTX7 472 aa11.01□□□□□ -0.65
SS18-221ENST00000582448 HAUS6Q7Z4H7 955 aa11.01□□□□□ -0.65
SS18-221ENST00000582448 PDZD3Q86UT5 571 aa11.01□□□□□ -0.65
SS18-221ENST00000582448 RHPN2Q8IUC4 686 aa11.01□□□□□ -0.65
SS18-221ENST00000582448 URGCPQ8TCY9 931 aa11.01□□□□□ -0.65
SS18-221ENST00000582448 CPLX3Q8WVH0 158 aa11.01□□□□□ -0.65
SS18-221ENST00000582448 EEF2KMTQ96G04 330 aa11.01□□□□□ -0.65
SS18-221ENST00000582448 NLRP4Q96MN2 994 aa11.01□□□□□ -0.65
SS18-221ENST00000582448 BAG1Q99933 345 aaPredicted RBP11.01□□□□□ -0.65
SS18-221ENST00000582448 FGFBP2Q9BYJ0 223 aa11.01□□□□□ -0.65
SS18-221ENST00000582448 ST6GALNAC4Q9H4F1 302 aa11.01□□□□□ -0.65
SS18-221ENST00000582448 GSX1Q9H4S2 264 aaPredicted RBP11.01□□□□□ -0.65
SS18-221ENST00000582448 KMT5AQ9NQR1 393 aa11.01□□□□□ -0.65
SS18-221ENST00000582448 CHST12Q9NRB3 414 aa11.01□□□□□ -0.65
SS18-221ENST00000582448 AP4E1Q9UPM8 1137 aa11.01□□□□□ -0.65
SS18-221ENST00000582448 LUC7L2Q9Y383 392 aaKnown RBP11.01□□□□□ -0.65
SS18-221ENST00000582448 IRAK3Q9Y616 596 aa11.01□□□□□ -0.65
SS18-221ENST00000582448 ARHGAP6O43182 974 aa11□□□□□ -0.65
SS18-221ENST00000582448 ZSCAN12O43309 604 aa11□□□□□ -0.65
SS18-221ENST00000582448 MFAP3LO75121 409 aa11□□□□□ -0.65
SS18-221ENST00000582448 DDHD2O94830 711 aa11□□□□□ -0.65
SS18-221ENST00000582448 POMCP01189 267 aa11□□□□□ -0.65
SS18-221ENST00000582448 F13BP05160 661 aa11□□□□□ -0.65
SS18-221ENST00000582448 GSTP1P09211 210 aaKnown RBP11□□□□□ -0.65
SS18-221ENST00000582448 SPATA31D3P0C874 917 aa11□□□□□ -0.65
SS18-221ENST00000582448 CASP14P31944 242 aa11□□□□□ -0.65
SS18-221ENST00000582448 MAPK7Q13164 816 aa11□□□□□ -0.65
SS18-221ENST00000582448 NFIL3Q16649 462 aa11□□□□□ -0.65
SS18-221ENST00000582448 ZC2HC1CQ53FD0 456 aaPredicted RBP11□□□□□ -0.65
SS18-221ENST00000582448 SPATA31D4Q6ZUB0 917 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms