RNA–Protein interactions for RNA: ENST00000582240.5

PPP4R1-221, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-221ENST00000582240 NPR3P17342 541 aa21.87■■□□□ 1.09
PPP4R1-221ENST00000582240 CDK11BP21127 795 aaKnown RBP21.87■■□□□ 1.09
PPP4R1-221ENST00000582240 USP8P40818 1118 aa21.87■■□□□ 1.09
PPP4R1-221ENST00000582240 KLK7P49862 253 aa21.87■■□□□ 1.09
PPP4R1-221ENST00000582240 COPB1P53618 953 aaKnown RBP21.87■■□□□ 1.09
PPP4R1-221ENST00000582240 TMEM31Q5JXX7 168 aa21.87■■□□□ 1.09
PPP4R1-221ENST00000582240 CEP295NLQ96MC4 621 aa21.87■■□□□ 1.09
PPP4R1-221ENST00000582240 LRFN3Q9BTN0 628 aa21.87■■□□□ 1.09
PPP4R1-221ENST00000582240 LSM14BQ9BX40 385 aaKnown RBP21.87■■□□□ 1.09
PPP4R1-221ENST00000582240 FAM124BQ9H5Z6 455 aaPredicted RBP21.87■■□□□ 1.09
PPP4R1-221ENST00000582240 TRPV4Q9HBA0 871 aa21.87■■□□□ 1.09
PPP4R1-221ENST00000582240 IL37Q9NZH6 218 aa21.87■■□□□ 1.09
PPP4R1-221ENST00000582240 APEX2Q9UBZ4 518 aa21.87■■□□□ 1.09
PPP4R1-221ENST00000582240 DNAJC12Q9UKB3 198 aa21.87■■□□□ 1.09
PPP4R1-221ENST00000582240 ZNF840PA6NDX5 716 aa21.86■■□□□ 1.09
PPP4R1-221ENST00000582240 DPYSL4O14531 572 aa21.86■■□□□ 1.09
PPP4R1-221ENST00000582240 PNMA6AP0CW24 399 aaPredicted RBP21.86■■□□□ 1.09
PPP4R1-221ENST00000582240 ATP1A3P13637 1013 aa21.86■■□□□ 1.09
PPP4R1-221ENST00000582240 GDI1P31150 447 aa21.86■■□□□ 1.09
PPP4R1-221ENST00000582240 ZNF132P52740 706 aa21.86■■□□□ 1.09
PPP4R1-221ENST00000582240 MFAP3P55082 362 aa21.86■■□□□ 1.09
PPP4R1-221ENST00000582240 ANKRD52Q8NB46 1076 aa21.86■■□□□ 1.09
PPP4R1-221ENST00000582240 RIN3Q8TB24 985 aa21.86■■□□□ 1.09
PPP4R1-221ENST00000582240 USP13Q92995 863 aaPredicted RBP21.86■■□□□ 1.09
PPP4R1-221ENST00000582240 C1QTNF1Q9BXJ1 281 aa21.86■■□□□ 1.09
PPP4R1-221ENST00000582240 NAT10Q9H0A0 1025 aaKnown RBP21.86■■□□□ 1.09
PPP4R1-221ENST00000582240 LIMA1Q9UHB6 759 aaKnown RBP21.86■■□□□ 1.09
PPP4R1-221ENST00000582240 BECN2A8MW95 431 aa21.85■■□□□ 1.09
PPP4R1-221ENST00000582240 O00370 1275 aa21.85■■□□□ 1.09
PPP4R1-221ENST00000582240 GPR37L1O60883 481 aa21.85■■□□□ 1.09
PPP4R1-221ENST00000582240 PAEPP09466 180 aa21.85■■□□□ 1.09
PPP4R1-221ENST00000582240 ZNF18P17022 549 aa21.85■■□□□ 1.09
PPP4R1-221ENST00000582240 DDX6P26196 483 aaKnown RBP eCLIP21.85■■□□□ 1.09
PPP4R1-221ENST00000582240 AVPR1AP37288 418 aa21.85■■□□□ 1.09
PPP4R1-221ENST00000582240 ZNF165P49910 485 aa21.85■■□□□ 1.09
PPP4R1-221ENST00000582240 PDE4CQ08493 712 aa21.85■■□□□ 1.09
PPP4R1-221ENST00000582240 NFKBIBQ15653 356 aa21.85■■□□□ 1.09
PPP4R1-221ENST00000582240 SKOR2Q2VWA4 1001 aaPredicted RBP21.85■■□□□ 1.09
PPP4R1-221ENST00000582240 ZSCAN23Q3MJ62 389 aa21.85■■□□□ 1.09
PPP4R1-221ENST00000582240 HFE2Q6ZVN8 426 aa21.85■■□□□ 1.09
PPP4R1-221ENST00000582240 MFSD6LQ8IWD5 586 aa21.85■■□□□ 1.09
PPP4R1-221ENST00000582240 PBXIP1Q96AQ6 731 aa21.85■■□□□ 1.09
PPP4R1-221ENST00000582240 ZFYVE19Q96K21 471 aa21.85■■□□□ 1.09
PPP4R1-221ENST00000582240 SLITRK1Q96PX8 696 aa21.85■■□□□ 1.09
PPP4R1-221ENST00000582240 TRMT61BQ9BVS5 477 aaKnown RBP21.85■■□□□ 1.09
PPP4R1-221ENST00000582240 RNF38Q9H0F5 515 aa21.85■■□□□ 1.09
PPP4R1-221ENST00000582240 EHD2Q9NZN4 543 aa21.85■■□□□ 1.09
PPP4R1-221ENST00000582240 TRAV19A0A0A6YYK7 116 aa21.84■■□□□ 1.09
PPP4R1-221ENST00000582240 KRBA1A5PL33 1030 aa21.84■■□□□ 1.09
PPP4R1-221ENST00000582240 CYP26A1O43174 497 aa21.84■■□□□ 1.09
PPP4R1-221ENST00000582240 PSMC3P17980 439 aa21.84■■□□□ 1.09
PPP4R1-221ENST00000582240 HDCP19113 662 aa21.84■■□□□ 1.09
PPP4R1-221ENST00000582240 PIGZQ86VD9 579 aa21.84■■□□□ 1.09
PPP4R1-221ENST00000582240 SIX5Q8N196 739 aa21.84■■□□□ 1.09
PPP4R1-221ENST00000582240 TTC8Q8TAM2 541 aa21.84■■□□□ 1.09
PPP4R1-221ENST00000582240 NDRG1Q92597 394 aaKnown RBP21.84■■□□□ 1.09
PPP4R1-221ENST00000582240 BPIFA3Q9BQP9 254 aa21.84■■□□□ 1.09
PPP4R1-221ENST00000582240 BRD9Q9H8M2 597 aa21.84■■□□□ 1.09
PPP4R1-221ENST00000582240 HESX1Q9UBX0 185 aa21.84■■□□□ 1.09
PPP4R1-221ENST00000582240 KIAA1257Q9ULG3 409 aa21.84■■□□□ 1.09
PPP4R1-221ENST00000582240 CNTN6Q9UQ52 1028 aa21.84■■□□□ 1.09
PPP4R1-221ENST00000582240 FHOD1Q9Y613 1164 aa21.84■■□□□ 1.09
PPP4R1-221ENST00000582240 GREB1Q4ZG55 1949 aa21.83■■□□□ 1.09
PPP4R1-221ENST00000582240 CKMP06732 381 aa21.83■■□□□ 1.09
PPP4R1-221ENST00000582240 RGS7P49802 495 aa21.83■■□□□ 1.09
PPP4R1-221ENST00000582240 KIF11P52732 1056 aa21.83■■□□□ 1.09
PPP4R1-221ENST00000582240 IQCB1Q15051 598 aa21.83■■□□□ 1.09
PPP4R1-221ENST00000582240 KLHDC7AQ5VTJ3 777 aa21.83■■□□□ 1.09
PPP4R1-221ENST00000582240 APTXQ7Z2E3 356 aaKnown RBP21.83■■□□□ 1.09
PPP4R1-221ENST00000582240 YAF2Q8IY57 180 aa21.83■■□□□ 1.09
PPP4R1-221ENST00000582240 NMUR1Q9HB89 426 aa21.83■■□□□ 1.09
PPP4R1-221ENST00000582240 CBX8Q9HC52 389 aa21.83■■□□□ 1.09
PPP4R1-221ENST00000582240 SLC2A4RGQ9NR83 387 aa21.83■■□□□ 1.09
PPP4R1-221ENST00000582240 TDP1Q9NUW8 608 aa21.83■■□□□ 1.09
PPP4R1-221ENST00000582240 COMMD8Q9NX08 183 aa21.83■■□□□ 1.09
PPP4R1-221ENST00000582240 TECTAO75443 2155 aa21.82■■□□□ 1.08
PPP4R1-221ENST00000582240 SMTNL1A8MU46 457 aa21.82■■□□□ 1.08
PPP4R1-221ENST00000582240 FOXN3O00409 490 aaPredicted RBP21.82■■□□□ 1.08
PPP4R1-221ENST00000582240 PIK3R2O00459 728 aa21.82■■□□□ 1.08
PPP4R1-221ENST00000582240 TPM2P07951 284 aa21.82■■□□□ 1.08
PPP4R1-221ENST00000582240 USP17L7P0C7H9 530 aa21.82■■□□□ 1.08
PPP4R1-221ENST00000582240 WEE1P30291 646 aa21.82■■□□□ 1.08
PPP4R1-221ENST00000582240 CNGA2Q16280 664 aa21.82■■□□□ 1.08
PPP4R1-221ENST00000582240 DENND1BQ6P3S1 775 aa21.82■■□□□ 1.08
PPP4R1-221ENST00000582240 LCLAT1Q6UWP7 414 aa21.82■■□□□ 1.08
PPP4R1-221ENST00000582240 ENOSF1Q7L5Y1 443 aa21.82■■□□□ 1.08
PPP4R1-221ENST00000582240 CELF5Q8N6W0 485 aaKnown RBP21.82■■□□□ 1.08
PPP4R1-221ENST00000582240 BPIFB1Q8TDL5 484 aa21.82■■□□□ 1.08
PPP4R1-221ENST00000582240 SHC3Q92529 594 aa21.82■■□□□ 1.08
PPP4R1-221ENST00000582240 CCSER2Q9H7U1 834 aa21.82■■□□□ 1.08
PPP4R1-221ENST00000582240 OSER1Q9NX31 292 aa21.82■■□□□ 1.08
PPP4R1-221ENST00000582240 SMPD4Q9NXE4 827 aa21.82■■□□□ 1.08
PPP4R1-221ENST00000582240 NUDT5Q9UKK9 219 aa21.82■■□□□ 1.08
PPP4R1-221ENST00000582240 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.82■■□□□ 1.08
PPP4R1-221ENST00000582240 COL4A3Q01955 1670 aa21.82■■□□□ 1.08
PPP4R1-221ENST00000582240 A0A1W2PQH9 124 aa21.81■■□□□ 1.08
PPP4R1-221ENST00000582240 FAM92AA1XBS5 289 aa21.81■■□□□ 1.08
PPP4R1-221ENST00000582240 M0QYV0 167 aa21.81■■□□□ 1.08
PPP4R1-221ENST00000582240 SCAMP3O14828 347 aaKnown RBP21.81■■□□□ 1.08
PPP4R1-221ENST00000582240 ZNF263O14978 683 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms