RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 RAB6CQ53S08 254 aa14.3□□□□□ -0.12
RNF43-205ENST00000581868 SH3PXD2AQ5TCZ1 1133 aa14.3□□□□□ -0.12
RNF43-205ENST00000581868 NAIF1Q69YI7 327 aaPredicted RBP14.3□□□□□ -0.12
RNF43-205ENST00000581868 C1orf228Q6PIY5 440 aa14.3□□□□□ -0.12
RNF43-205ENST00000581868 RFX8Q6ZV50 586 aa14.3□□□□□ -0.12
RNF43-205ENST00000581868 XYLT1Q86Y38 959 aa14.3□□□□□ -0.12
RNF43-205ENST00000581868 TEX9Q8N6V9 391 aa14.3□□□□□ -0.12
RNF43-205ENST00000581868 CEP120Q8N960 986 aa14.3□□□□□ -0.12
RNF43-205ENST00000581868 RNF149Q8NC42 400 aa14.3□□□□□ -0.12
RNF43-205ENST00000581868 DTX3LQ8TDB6 740 aa14.3□□□□□ -0.12
RNF43-205ENST00000581868 FAF2Q96CS3 445 aa14.3□□□□□ -0.12
RNF43-205ENST00000581868 WRNIP1Q96S55 665 aa14.3□□□□□ -0.12
RNF43-205ENST00000581868 ACO2Q99798 780 aaKnown RBP14.3□□□□□ -0.12
RNF43-205ENST00000581868 IQCGQ9H095 443 aaKnown RBP14.3□□□□□ -0.12
RNF43-205ENST00000581868 RAB6CQ9H0N0 254 aa14.3□□□□□ -0.12
RNF43-205ENST00000581868 XYLT2Q9H1B5 865 aa14.3□□□□□ -0.12
RNF43-205ENST00000581868 PICK1Q9NRD5 415 aa14.3□□□□□ -0.12
RNF43-205ENST00000581868 USP18Q9UMW8 372 aa14.3□□□□□ -0.12
RNF43-205ENST00000581868 MTO1Q9Y2Z2 717 aaKnown RBP14.3□□□□□ -0.12
RNF43-205ENST00000581868 FER1L6Q2WGJ9 1857 aa14.29□□□□□ -0.12
RNF43-205ENST00000581868 H7C0C1 242 aa14.29□□□□□ -0.12
RNF43-205ENST00000581868 LIN7AO14910 233 aaPredicted RBP14.29□□□□□ -0.12
RNF43-205ENST00000581868 LMNAP02545 664 aaKnown RBP14.29□□□□□ -0.12
RNF43-205ENST00000581868 PRKCBP05771 671 aa14.29□□□□□ -0.12
RNF43-205ENST00000581868 DLDP09622 509 aaKnown RBP14.29□□□□□ -0.12
RNF43-205ENST00000581868 RFC5P40937 340 aa14.29□□□□□ -0.12
RNF43-205ENST00000581868 ETV4P43268 484 aa14.29□□□□□ -0.12
RNF43-205ENST00000581868 ATP5OP48047 213 aa14.29□□□□□ -0.12
RNF43-205ENST00000581868 STAT5BP51692 787 aa14.29□□□□□ -0.12
RNF43-205ENST00000581868 NEK3P51956 506 aa14.29□□□□□ -0.12
RNF43-205ENST00000581868 ROR1Q01973 937 aa14.29□□□□□ -0.12
RNF43-205ENST00000581868 PRKD1Q15139 912 aaPredicted RBP14.29□□□□□ -0.12
RNF43-205ENST00000581868 PPM1NQ8N819 430 aa14.29□□□□□ -0.12
RNF43-205ENST00000581868 SLC44A1Q8WWI5 657 aa14.29□□□□□ -0.12
RNF43-205ENST00000581868 FRMD8P1Q9BZ68 369 aaPredicted RBP14.29□□□□□ -0.12
RNF43-205ENST00000581868 PHACTR1Q9C0D0 580 aa14.29□□□□□ -0.12
RNF43-205ENST00000581868 PDGFDQ9GZP0 370 aaPredicted RBP14.29□□□□□ -0.12
RNF43-205ENST00000581868 CPSF3Q9UKF6 684 aaKnown RBP14.29□□□□□ -0.12
RNF43-205ENST00000581868 CCDC189A1A4V9 331 aa14.29□□□□□ -0.12
RNF43-205ENST00000581868 DPPA5A6NC42 116 aa14.29□□□□□ -0.12
RNF43-205ENST00000581868 A6NHS1 94 aa14.29□□□□□ -0.12
RNF43-205ENST00000581868 MAP3K6O95382 1288 aa14.29□□□□□ -0.12
RNF43-205ENST00000581868 TRUB2O95900 331 aaKnown RBP14.29□□□□□ -0.12
RNF43-205ENST00000581868 TNNC2P02585 160 aa14.29□□□□□ -0.12
RNF43-205ENST00000581868 HOXC6P09630 235 aa14.29□□□□□ -0.12
RNF43-205ENST00000581868 LINGO3P0C6S8 592 aa14.29□□□□□ -0.12
RNF43-205ENST00000581868 PTPRAP18433 802 aa14.29□□□□□ -0.12
RNF43-205ENST00000581868 SERPINB4P48594 390 aa14.29□□□□□ -0.12
RNF43-205ENST00000581868 CDH6P55285 790 aa14.29□□□□□ -0.12
RNF43-205ENST00000581868 ACSBG2Q5FVE4 666 aa14.29□□□□□ -0.12
RNF43-205ENST00000581868 FAXCQ5TGI0 409 aa14.29□□□□□ -0.12
RNF43-205ENST00000581868 CCDC62Q6P9F0 684 aa14.29□□□□□ -0.12
RNF43-205ENST00000581868 CDHR3Q6ZTQ4 885 aa14.29□□□□□ -0.12
RNF43-205ENST00000581868 EEPD1Q7L9B9 569 aa14.29□□□□□ -0.12
RNF43-205ENST00000581868 LRRN4Q8WUT4 740 aa14.29□□□□□ -0.12
RNF43-205ENST00000581868 SKA1Q96BD8 255 aa14.29□□□□□ -0.12
RNF43-205ENST00000581868 MECRQ9BV79 373 aa14.29□□□□□ -0.12
RNF43-205ENST00000581868 STOML1Q9UBI4 398 aa14.29□□□□□ -0.12
RNF43-205ENST00000581868 TRIM49D1C9J1S8 452 aa14.28□□□□□ -0.12
RNF43-205ENST00000581868 E5RJQ4 531 aa14.28□□□□□ -0.12
RNF43-205ENST00000581868 COPEO14579 308 aa14.28□□□□□ -0.12
RNF43-205ENST00000581868 NVLO15381 856 aaKnown RBP14.28□□□□□ -0.12
RNF43-205ENST00000581868 MED7O43513 233 aa14.28□□□□□ -0.12
RNF43-205ENST00000581868 DHRS4L1P0CG22 281 aa14.28□□□□□ -0.12
RNF43-205ENST00000581868 UBA1P22314 1058 aaKnown RBP14.28□□□□□ -0.12
RNF43-205ENST00000581868 OAZ1P54368 228 aa14.28□□□□□ -0.12
RNF43-205ENST00000581868 TARBP2Q15633 366 aaKnown RBP14.28□□□□□ -0.12
RNF43-205ENST00000581868 TAZQ16635 292 aa14.28□□□□□ -0.12
RNF43-205ENST00000581868 CDO1Q16878 200 aa14.28□□□□□ -0.12
RNF43-205ENST00000581868 ALYREFQ86V81 257 aaKnown RBP14.28□□□□□ -0.12
RNF43-205ENST00000581868 CMASQ8NFW8 434 aaPredicted RBP14.28□□□□□ -0.12
RNF43-205ENST00000581868 ANKRD36BP1Q96IX9 119 aa14.28□□□□□ -0.12
RNF43-205ENST00000581868 TUBB6Q9BUF5 446 aa14.28□□□□□ -0.12
RNF43-205ENST00000581868 AS3MTQ9HBK9 375 aa14.28□□□□□ -0.12
RNF43-205ENST00000581868 RAB6BQ9NRW1 208 aa14.28□□□□□ -0.12
RNF43-205ENST00000581868 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.28□□□□□ -0.12
RNF43-205ENST00000581868 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.28□□□□□ -0.121e-12■■□□□ 13.6
RNF43-205ENST00000581868 NMRK1Q9NWW6 199 aa14.28□□□□□ -0.12
RNF43-205ENST00000581868 TAS2R1Q9NYW7 299 aa14.28□□□□□ -0.12
RNF43-205ENST00000581868 HMGXB4Q9UGU5 601 aa14.28□□□□□ -0.12
RNF43-205ENST00000581868 HACL1Q9UJ83 578 aa14.28□□□□□ -0.12
RNF43-205ENST00000581868 CCDC195A0A1B0GUA6 201 aa14.28□□□□□ -0.12
RNF43-205ENST00000581868 FCHO1O14526 889 aa14.28□□□□□ -0.12
RNF43-205ENST00000581868 ERFP50548 548 aa14.28□□□□□ -0.12
RNF43-205ENST00000581868 EFNA5P52803 228 aa14.28□□□□□ -0.12
RNF43-205ENST00000581868 LAMTOR4Q0VGL1 99 aa14.28□□□□□ -0.12
RNF43-205ENST00000581868 MDH1BQ5I0G3 518 aa14.28□□□□□ -0.12
RNF43-205ENST00000581868 FAM102AQ5T9C2 384 aaPredicted RBP14.28□□□□□ -0.12
RNF43-205ENST00000581868 CDCA2Q69YH5 1023 aaPredicted RBP14.28□□□□□ -0.12
RNF43-205ENST00000581868 FNIP1Q8TF40 1166 aa14.28□□□□□ -0.12
RNF43-205ENST00000581868 WDR60Q8WVS4 1066 aa14.28□□□□□ -0.12
RNF43-205ENST00000581868 OXNAD1Q96HP4 312 aaPredicted RBP14.28□□□□□ -0.12
RNF43-205ENST00000581868 TWNKQ96RR1 684 aa14.28□□□□□ -0.12
RNF43-205ENST00000581868 PEBP4Q96S96 227 aa14.28□□□□□ -0.12
RNF43-205ENST00000581868 SRPK1Q96SB4 655 aaKnown RBP14.28□□□□□ -0.12
RNF43-205ENST00000581868 SLC13A1Q9BZW2 595 aa14.28□□□□□ -0.12
RNF43-205ENST00000581868 LHX5Q9H2C1 402 aa14.28□□□□□ -0.12
RNF43-205ENST00000581868 RPL26L1Q9UNX3 145 aaKnown RBP14.28□□□□□ -0.12
RNF43-205ENST00000581868 TEX264Q9Y6I9 313 aa14.28□□□□□ -0.12
RNF43-205ENST00000581868 COL11A1P12107 1806 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms