RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 MARCH11A6NNE9 402 aa5.59□□□□□ -1.51
SMCHD1-205ENST00000581383 CLCA1A8K7I4 914 aa5.59□□□□□ -1.51
SMCHD1-205ENST00000581383 SOAT2O75908 522 aa5.59□□□□□ -1.51
SMCHD1-205ENST00000581383 INMTO95050 263 aa5.59□□□□□ -1.51
SMCHD1-205ENST00000581383 RASAL1O95294 804 aa5.59□□□□□ -1.51
SMCHD1-205ENST00000581383 NDST3O95803 873 aa5.59□□□□□ -1.51
SMCHD1-205ENST00000581383 TPH1P17752 444 aa5.59□□□□□ -1.51
SMCHD1-205ENST00000581383 MPLP40238 635 aa5.59□□□□□ -1.51
SMCHD1-205ENST00000581383 CPT1AP50416 773 aa5.59□□□□□ -1.51
SMCHD1-205ENST00000581383 LOXL3P58215 753 aa5.59□□□□□ -1.51
SMCHD1-205ENST00000581383 MYO1EQ12965 1108 aa5.59□□□□□ -1.51
SMCHD1-205ENST00000581383 HLXQ14774 488 aaPredicted RBP5.59□□□□□ -1.51
SMCHD1-205ENST00000581383 INSCQ1MX18 579 aa5.59□□□□□ -1.51
SMCHD1-205ENST00000581383 RBM20Q5T481 1227 aaKnown RBP5.59□□□□□ -1.51
SMCHD1-205ENST00000581383 CACHD1Q5VU97 1274 aa5.59□□□□□ -1.51
SMCHD1-205ENST00000581383 PLAG1Q6DJT9 500 aa5.59□□□□□ -1.51
SMCHD1-205ENST00000581383 FCRL6Q6DN72 434 aa5.59□□□□□ -1.51
SMCHD1-205ENST00000581383 MICALCLQ6ZW33 695 aa5.59□□□□□ -1.51
SMCHD1-205ENST00000581383 CCDC150Q8NCX0 1101 aa5.59□□□□□ -1.51
SMCHD1-205ENST00000581383 BPIFB1Q8TDL5 484 aa5.59□□□□□ -1.51
SMCHD1-205ENST00000581383 ACTRT2Q8TDY3 377 aa5.59□□□□□ -1.51
SMCHD1-205ENST00000581383 SNX19Q92543 992 aa5.59□□□□□ -1.51
SMCHD1-205ENST00000581383 PPP2R3CQ969Q6 453 aa5.59□□□□□ -1.51
SMCHD1-205ENST00000581383 C18orf8Q96DM3 657 aa5.59□□□□□ -1.51
SMCHD1-205ENST00000581383 PTDSS2Q9BVG9 487 aa5.59□□□□□ -1.51
SMCHD1-205ENST00000581383 TTLL2Q9BWV7 592 aa5.59□□□□□ -1.51
SMCHD1-205ENST00000581383 MAGEB5Q9BZ81 275 aa5.59□□□□□ -1.51
SMCHD1-205ENST00000581383 MAST3O60307 1309 aa5.58□□□□□ -1.52
SMCHD1-205ENST00000581383 TRGV11A0A075B6L2 103 aa5.58□□□□□ -1.52
SMCHD1-205ENST00000581383 A0A087WZ62 844 aa5.58□□□□□ -1.52
SMCHD1-205ENST00000581383 A0A0B4J269 797 aa5.58□□□□□ -1.52
SMCHD1-205ENST00000581383 RGS10O43665 173 aa5.58□□□□□ -1.52
SMCHD1-205ENST00000581383 TRIAP1O43715 76 aa5.58□□□□□ -1.52
SMCHD1-205ENST00000581383 PEX1O43933 1283 aa5.58□□□□□ -1.52
SMCHD1-205ENST00000581383 CD6P30203 668 aa5.58□□□□□ -1.52
SMCHD1-205ENST00000581383 LRPAP1P30533 357 aa5.58□□□□□ -1.52
SMCHD1-205ENST00000581383 DGKEP52429 567 aa5.58□□□□□ -1.52
SMCHD1-205ENST00000581383 TUBB3Q13509 450 aa5.58□□□□□ -1.52
SMCHD1-205ENST00000581383 DHX8Q14562 1220 aaKnown RBP5.58□□□□□ -1.52
SMCHD1-205ENST00000581383 KCNAB1Q14722 419 aa5.58□□□□□ -1.52
SMCHD1-205ENST00000581383 ELF2Q15723 593 aa5.58□□□□□ -1.52
SMCHD1-205ENST00000581383 ARHGAP40Q5TG30 622 aa5.58□□□□□ -1.52
SMCHD1-205ENST00000581383 VPS53Q5VIR6 699 aa5.58□□□□□ -1.52
SMCHD1-205ENST00000581383 PGBD2Q6P3X8 592 aa5.58□□□□□ -1.52
SMCHD1-205ENST00000581383 CCDC174Q6PII3 467 aa5.58□□□□□ -1.52
SMCHD1-205ENST00000581383 FBXO38Q6PIJ6 1188 aa5.58□□□□□ -1.52
SMCHD1-205ENST00000581383 ZNF527Q8NB42 609 aa5.58□□□□□ -1.52
SMCHD1-205ENST00000581383 FANCBQ8NB91 859 aa5.58□□□□□ -1.52
SMCHD1-205ENST00000581383 MUL1Q969V5 352 aa5.58□□□□□ -1.52
SMCHD1-205ENST00000581383 CXorf36Q9H7Y0 433 aa5.58□□□□□ -1.52
SMCHD1-205ENST00000581383 UNKLQ9H9P5 680 aaKnown RBP5.58□□□□□ -1.52
SMCHD1-205ENST00000581383 SLC39A10Q9ULF5 831 aa5.58□□□□□ -1.52
SMCHD1-205ENST00000581383 NDRG4Q9ULP0 352 aaKnown RBP5.58□□□□□ -1.52
SMCHD1-205ENST00000581383 CDY1Q9Y6F8 540 aa5.58□□□□□ -1.52
SMCHD1-205ENST00000581383 FAM234BA2RU67 622 aa5.57□□□□□ -1.52
SMCHD1-205ENST00000581383 HNRNPDLO14979 420 aaKnown RBP5.57□□□□□ -1.52
SMCHD1-205ENST00000581383 FFAR2O15552 330 aa5.57□□□□□ -1.52
SMCHD1-205ENST00000581383 CCP110O43303 1012 aa5.57□□□□□ -1.52
SMCHD1-205ENST00000581383 RRP9O43818 475 aaKnown RBP5.57□□□□□ -1.52
SMCHD1-205ENST00000581383 NBNO60934 754 aa5.57□□□□□ -1.52
SMCHD1-205ENST00000581383 TYRP1P17643 537 aa5.57□□□□□ -1.52
SMCHD1-205ENST00000581383 KCNA3P22001 575 aa5.57□□□□□ -1.52
SMCHD1-205ENST00000581383 ALDH9A1P49189 494 aa5.57□□□□□ -1.52
SMCHD1-205ENST00000581383 VAV2P52735 878 aa5.57□□□□□ -1.52
SMCHD1-205ENST00000581383 PRKAG1P54619 331 aa5.57□□□□□ -1.52
SMCHD1-205ENST00000581383 ZNF169Q14929 603 aaPredicted RBP5.57□□□□□ -1.52
SMCHD1-205ENST00000581383 KRT72Q14CN4 511 aa5.57□□□□□ -1.52
SMCHD1-205ENST00000581383 PTCHD3Q3KNS1 767 aa5.57□□□□□ -1.52
SMCHD1-205ENST00000581383 TUBB8Q3ZCM7 444 aa5.57□□□□□ -1.52
SMCHD1-205ENST00000581383 ANO1Q5XXA6 986 aa5.57□□□□□ -1.52
SMCHD1-205ENST00000581383 RGS7BPQ6MZT1 257 aaPredicted RBP5.57□□□□□ -1.52
SMCHD1-205ENST00000581383 GLIS1Q8NBF1 620 aa5.57□□□□□ -1.52
SMCHD1-205ENST00000581383 SLC30A5Q8TAD4 765 aa5.57□□□□□ -1.52
SMCHD1-205ENST00000581383 SMCR8Q8TEV9 937 aaPredicted RBP5.57□□□□□ -1.52
SMCHD1-205ENST00000581383 STK33Q9BYT3 514 aa5.57□□□□□ -1.52
SMCHD1-205ENST00000581383 DHX36Q9H2U1 1008 aaKnown RBP5.57□□□□□ -1.52
SMCHD1-205ENST00000581383 GBA2Q9HCG7 927 aaPredicted RBP5.57□□□□□ -1.52
SMCHD1-205ENST00000581383 HEYLQ9NQ87 328 aaPredicted RBP5.57□□□□□ -1.52
SMCHD1-205ENST00000581383 TMEM74BQ9NUR3 256 aa5.57□□□□□ -1.52
SMCHD1-205ENST00000581383 INTS13Q9NVM9 706 aa5.57□□□□□ -1.52
SMCHD1-205ENST00000581383 DNMT3BQ9UBC3 853 aaKnown RBP5.57□□□□□ -1.52
SMCHD1-205ENST00000581383 DKK4Q9UBT3 224 aa5.57□□□□□ -1.52
SMCHD1-205ENST00000581383 RGS17Q9UGC6 210 aaPredicted RBP5.57□□□□□ -1.52
SMCHD1-205ENST00000581383 PODXLO00592 558 aa5.56□□□□□ -1.52
SMCHD1-205ENST00000581383 PIAS2O75928 621 aa5.56□□□□□ -1.52
SMCHD1-205ENST00000581383 IGLV2-14P01704 120 aa5.56□□□□□ -1.52
SMCHD1-205ENST00000581383 GABRB3P28472 473 aa5.56□□□□□ -1.52
SMCHD1-205ENST00000581383 CHKAP35790 457 aa5.56□□□□□ -1.52
SMCHD1-205ENST00000581383 COPAP53621 1224 aa5.56□□□□□ -1.52
SMCHD1-205ENST00000581383 ATXN1P54253 815 aaKnown RBP5.56□□□□□ -1.52
SMCHD1-205ENST00000581383 E2F2Q14209 437 aa5.56□□□□□ -1.52
SMCHD1-205ENST00000581383 PUM3Q15397 648 aaKnown RBP5.56□□□□□ -1.52
SMCHD1-205ENST00000581383 ZNF750Q32MQ0 723 aa5.56□□□□□ -1.52
SMCHD1-205ENST00000581383 CRTC1Q6UUV9 634 aa5.56□□□□□ -1.52
SMCHD1-205ENST00000581383 USP49Q70CQ1 688 aa5.56□□□□□ -1.52
SMCHD1-205ENST00000581383 KRT28Q7Z3Y7 464 aa5.56□□□□□ -1.52
SMCHD1-205ENST00000581383 TMEM171Q8WVE6 324 aa5.56□□□□□ -1.52
SMCHD1-205ENST00000581383 NAF1Q96HR8 494 aaKnown RBP5.56□□□□□ -1.52
SMCHD1-205ENST00000581383 NELL2Q99435 816 aa5.56□□□□□ -1.52
SMCHD1-205ENST00000581383 GDF15Q99988 308 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms