RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 LRRC71Q8N4P6 559 aa5.48□□□□□ -1.53
SMCHD1-204ENST00000581226 ZBTB45Q96K62 511 aaPredicted RBP5.48□□□□□ -1.53
SMCHD1-204ENST00000581226 CCDC138Q96M89 665 aa5.48□□□□□ -1.53
SMCHD1-204ENST00000581226 RIPOR3Q96MK2 946 aa5.48□□□□□ -1.53
SMCHD1-204ENST00000581226 MYD88Q99836 296 aa5.48□□□□□ -1.53
SMCHD1-204ENST00000581226 DPCDQ9BVM2 203 aaPredicted RBP5.48□□□□□ -1.53
SMCHD1-204ENST00000581226 FAM83DQ9H4H8 585 aa5.48□□□□□ -1.53
SMCHD1-204ENST00000581226 RIOX1Q9H6W3 641 aa5.48□□□□□ -1.53
SMCHD1-204ENST00000581226 IL17RBQ9NRM6 502 aa5.48□□□□□ -1.53
SMCHD1-204ENST00000581226 DKK4Q9UBT3 224 aa5.48□□□□□ -1.53
SMCHD1-204ENST00000581226 SH2B3Q9UQQ2 575 aa5.48□□□□□ -1.53
SMCHD1-204ENST00000581226 INSL6Q9Y581 213 aa5.48□□□□□ -1.53
SMCHD1-204ENST00000581226 CCDC194A0A1B0GVG4 234 aa5.47□□□□□ -1.53
SMCHD1-204ENST00000581226 ZAR1LA6NP61 321 aa5.47□□□□□ -1.53
SMCHD1-204ENST00000581226 GCOM1H8Y6P7 765 aaPredicted RBP5.47□□□□□ -1.53
SMCHD1-204ENST00000581226 QSOX1O00391 747 aa5.47□□□□□ -1.53
SMCHD1-204ENST00000581226 SUV39H1O43463 412 aa5.47□□□□□ -1.53
SMCHD1-204ENST00000581226 NCK2O43639 380 aa5.47□□□□□ -1.53
SMCHD1-204ENST00000581226 VNN1O95497 513 aa5.47□□□□□ -1.53
SMCHD1-204ENST00000581226 NUDT3O95989 172 aa5.47□□□□□ -1.53
SMCHD1-204ENST00000581226 IFIT2P09913 472 aaKnown RBP5.47□□□□□ -1.53
SMCHD1-204ENST00000581226 FAM163BP0C2L3 166 aa5.47□□□□□ -1.53
SMCHD1-204ENST00000581226 JUPP14923 745 aa5.47□□□□□ -1.53
SMCHD1-204ENST00000581226 FGFR2P21802 821 aa5.47□□□□□ -1.53
SMCHD1-204ENST00000581226 TNFSF4P23510 183 aa5.47□□□□□ -1.53
SMCHD1-204ENST00000581226 UQCRC1P31930 480 aa5.47□□□□□ -1.53
SMCHD1-204ENST00000581226 CYP2C18P33260 490 aa5.47□□□□□ -1.53
SMCHD1-204ENST00000581226 TM4SF4P48230 202 aa5.47□□□□□ -1.53
SMCHD1-204ENST00000581226 CCT8P50990 548 aa5.47□□□□□ -1.53
SMCHD1-204ENST00000581226 SYCP2LQ5T4T6 812 aa5.47□□□□□ -1.53
SMCHD1-204ENST00000581226 STRIP1Q5VSL9 837 aa5.47□□□□□ -1.53
SMCHD1-204ENST00000581226 HIBCHQ6NVY1 386 aaPredicted RBP5.47□□□□□ -1.53
SMCHD1-204ENST00000581226 SOCS4Q8WXH5 440 aa5.47□□□□□ -1.53
SMCHD1-204ENST00000581226 LRRC46Q96FV0 321 aa5.47□□□□□ -1.53
SMCHD1-204ENST00000581226 ZC3H10Q96K80 434 aaKnown RBP5.47□□□□□ -1.53
SMCHD1-204ENST00000581226 COLEC11Q9BWP8 271 aa5.47□□□□□ -1.53
SMCHD1-204ENST00000581226 CHST12Q9NRB3 414 aa5.47□□□□□ -1.53
SMCHD1-204ENST00000581226 GJB4Q9NTQ9 266 aa5.47□□□□□ -1.53
SMCHD1-204ENST00000581226 PADI4Q9UM07 663 aa5.47□□□□□ -1.53
SMCHD1-204ENST00000581226 CAPN11Q9UMQ6 739 aa5.47□□□□□ -1.53
SMCHD1-204ENST00000581226 USP22Q9UPT9 525 aa5.47□□□□□ -1.53
SMCHD1-204ENST00000581226 RASA4BC9J798 803 aa5.46□□□□□ -1.54
SMCHD1-204ENST00000581226 AREL1O15033 823 aa5.46□□□□□ -1.54
SMCHD1-204ENST00000581226 CD3EAPO15446 510 aaKnown RBP5.46□□□□□ -1.54
SMCHD1-204ENST00000581226 RASA4O43374 803 aa5.46□□□□□ -1.54
SMCHD1-204ENST00000581226 HGFP14210 728 aa5.46□□□□□ -1.54
SMCHD1-204ENST00000581226 ENGP17813 658 aa5.46□□□□□ -1.54
SMCHD1-204ENST00000581226 PCSK6P29122 969 aa5.46□□□□□ -1.54
SMCHD1-204ENST00000581226 EPHA3P29320 983 aa5.46□□□□□ -1.54
SMCHD1-204ENST00000581226 CLK3P49761 638 aaKnown RBP5.46□□□□□ -1.54
SMCHD1-204ENST00000581226 TPTEP56180 551 aa5.46□□□□□ -1.54
SMCHD1-204ENST00000581226 HDAC1Q13547 482 aaPredicted RBP5.46□□□□□ -1.54
SMCHD1-204ENST00000581226 KCNAB1Q14722 419 aa5.46□□□□□ -1.54
SMCHD1-204ENST00000581226 ARL13BQ3SXY8 428 aa5.46□□□□□ -1.54
SMCHD1-204ENST00000581226 PARS2Q7L3T8 475 aaKnown RBP5.46□□□□□ -1.54
SMCHD1-204ENST00000581226 BEND5Q7L4P6 421 aa5.46□□□□□ -1.54
SMCHD1-204ENST00000581226 SRLQ86TD4 932 aa5.46□□□□□ -1.54
SMCHD1-204ENST00000581226 ARHGEF25Q86VW2 580 aa5.46□□□□□ -1.54
SMCHD1-204ENST00000581226 RASAL3Q86YV0 1011 aa5.46□□□□□ -1.54
SMCHD1-204ENST00000581226 TXLNBQ8N3L3 684 aa5.46□□□□□ -1.54
SMCHD1-204ENST00000581226 VGLL2Q8N8G2 317 aa5.46□□□□□ -1.54
SMCHD1-204ENST00000581226 SVIPQ8NHG7 77 aa5.46□□□□□ -1.54
SMCHD1-204ENST00000581226 CPNE5Q9HCH3 593 aa5.46□□□□□ -1.54
SMCHD1-204ENST00000581226 HEYLQ9NQ87 328 aaPredicted RBP5.46□□□□□ -1.54
SMCHD1-204ENST00000581226 DLL3Q9NYJ7 618 aa5.46□□□□□ -1.54
SMCHD1-204ENST00000581226 MYO1AQ9UBC5 1043 aa5.46□□□□□ -1.54
SMCHD1-204ENST00000581226 DRG1Q9Y295 367 aaKnown RBP5.46□□□□□ -1.54
SMCHD1-204ENST00000581226 A0A1W2PPC4 97 aa5.45□□□□□ -1.54
SMCHD1-204ENST00000581226 PSMD9O00233 223 aa5.45□□□□□ -1.54
SMCHD1-204ENST00000581226 PTH2RP49190 550 aa5.45□□□□□ -1.54
SMCHD1-204ENST00000581226 MTHFSP49914 203 aa5.45□□□□□ -1.54
SMCHD1-204ENST00000581226 GATMP50440 423 aa5.45□□□□□ -1.54
SMCHD1-204ENST00000581226 PGDP52209 483 aa5.45□□□□□ -1.54
SMCHD1-204ENST00000581226 EEFSECP57772 596 aaKnown RBP5.45□□□□□ -1.54
SMCHD1-204ENST00000581226 PMS2P11Q13670 270 aa5.45□□□□□ -1.54
SMCHD1-204ENST00000581226 KRTAP15-1Q3LI76 137 aa5.45□□□□□ -1.54
SMCHD1-204ENST00000581226 ZNF362Q5T0B9 420 aaPredicted RBP5.45□□□□□ -1.54
SMCHD1-204ENST00000581226 ANKRD16Q6P6B7 361 aa5.45□□□□□ -1.54
SMCHD1-204ENST00000581226 CATSPERGQ6ZRH7 1159 aa5.45□□□□□ -1.54
SMCHD1-204ENST00000581226 WDR53Q7Z5U6 358 aaPredicted RBP5.45□□□□□ -1.54
SMCHD1-204ENST00000581226 OR2C3Q8N628 320 aa5.45□□□□□ -1.54
SMCHD1-204ENST00000581226 CCDC150Q8NCX0 1101 aa5.45□□□□□ -1.54
SMCHD1-204ENST00000581226 BRI3BPQ8WY22 251 aa5.45□□□□□ -1.54
SMCHD1-204ENST00000581226 ZG16BQ96DA0 208 aa5.45□□□□□ -1.54
SMCHD1-204ENST00000581226 ZNF668Q96K58 619 aaPredicted RBP5.45□□□□□ -1.54
SMCHD1-204ENST00000581226 UROC1Q96N76 676 aa5.45□□□□□ -1.54
SMCHD1-204ENST00000581226 TIMP4Q99727 224 aa5.45□□□□□ -1.54
SMCHD1-204ENST00000581226 ELAC2Q9BQ52 826 aaKnown RBP5.45□□□□□ -1.54
SMCHD1-204ENST00000581226 MAGEB5Q9BZ81 275 aa5.45□□□□□ -1.54
SMCHD1-204ENST00000581226 INO80BQ9C086 356 aaPredicted RBP5.45□□□□□ -1.54
SMCHD1-204ENST00000581226 KLK15Q9H2R5 256 aa5.45□□□□□ -1.54
SMCHD1-204ENST00000581226 SLITRK6Q9H5Y7 841 aa5.45□□□□□ -1.54
SMCHD1-204ENST00000581226 AS3MTQ9HBK9 375 aa5.45□□□□□ -1.54
SMCHD1-204ENST00000581226 DUSP22Q9NRW4 184 aa5.45□□□□□ -1.54
SMCHD1-204ENST00000581226 ASB6Q9NWX5 421 aa5.45□□□□□ -1.54
SMCHD1-204ENST00000581226 FNIP2Q9P278 1114 aa5.45□□□□□ -1.54
SMCHD1-204ENST00000581226 HPSEQ9Y251 543 aa5.45□□□□□ -1.54
SMCHD1-204ENST00000581226 ENTPD2Q9Y5L3 495 aa5.45□□□□□ -1.54
SMCHD1-204ENST00000581226 CLCA1A8K7I4 914 aa5.44□□□□□ -1.54
SMCHD1-204ENST00000581226 H0YIZ8 118 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms