RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 IFNAR2P48551 515 aa11.54□□□□□ -0.56
NDEL1-208ENST00000580237 SLC8A3P57103 927 aa11.54□□□□□ -0.56
NDEL1-208ENST00000580237 CUL2Q13617 745 aa11.54□□□□□ -0.56
NDEL1-208ENST00000580237 ZNF268Q14587 947 aaPredicted RBP11.54□□□□□ -0.56
NDEL1-208ENST00000580237 MTF1Q14872 753 aa11.54□□□□□ -0.56
NDEL1-208ENST00000580237 C1orf228Q6PIY5 440 aa11.54□□□□□ -0.56
NDEL1-208ENST00000580237 PPM1KQ8N3J5 372 aa11.54□□□□□ -0.56
NDEL1-208ENST00000580237 ARL14EPQ8N8R7 260 aaPredicted RBP11.54□□□□□ -0.56
NDEL1-208ENST00000580237 MLKLQ8NB16 471 aa11.54□□□□□ -0.56
NDEL1-208ENST00000580237 DTWD2Q8NBA8 298 aa11.54□□□□□ -0.56
NDEL1-208ENST00000580237 TTC8Q8TAM2 541 aa11.54□□□□□ -0.56
NDEL1-208ENST00000580237 FAM3CQ92520 227 aa11.54□□□□□ -0.56
NDEL1-208ENST00000580237 CYFIP2Q96F07 1278 aa11.54□□□□□ -0.56
NDEL1-208ENST00000580237 MSANTD3Q96H12 275 aa11.54□□□□□ -0.56
NDEL1-208ENST00000580237 CNOT6LQ96LI5 555 aaKnown RBP11.54□□□□□ -0.56
NDEL1-208ENST00000580237 HEXIM2Q96MH2 286 aaKnown RBP11.54□□□□□ -0.56
NDEL1-208ENST00000580237 FBXO44Q9H4M3 255 aa11.54□□□□□ -0.56
NDEL1-208ENST00000580237 TRPV5Q9NQA5 729 aa11.54□□□□□ -0.56
NDEL1-208ENST00000580237 ATG2BQ96BY7 2078 aa11.54□□□□□ -0.56
NDEL1-208ENST00000580237 ZNF840PA6NDX5 716 aa11.53□□□□□ -0.56
NDEL1-208ENST00000580237 H0Y858 1186 aa11.53□□□□□ -0.56
NDEL1-208ENST00000580237 AFPP02771 609 aaKnown RBP11.53□□□□□ -0.56
NDEL1-208ENST00000580237 MBL2P11226 248 aaPredicted RBP11.53□□□□□ -0.56
NDEL1-208ENST00000580237 CD19P15391 556 aa11.53□□□□□ -0.56
NDEL1-208ENST00000580237 PFKLP17858 780 aa11.53□□□□□ -0.56
NDEL1-208ENST00000580237 TARSP26639 723 aaKnown RBP11.53□□□□□ -0.56
NDEL1-208ENST00000580237 SOX9P48436 509 aa11.53□□□□□ -0.56
NDEL1-208ENST00000580237 NHLH1Q02575 133 aa11.53□□□□□ -0.56
NDEL1-208ENST00000580237 USP4Q13107 963 aa11.53□□□□□ -0.56
NDEL1-208ENST00000580237 ITPRIPL2Q3MIP1 535 aa11.53□□□□□ -0.56
NDEL1-208ENST00000580237 CLEC17AQ6ZS10 378 aa11.53□□□□□ -0.56
NDEL1-208ENST00000580237 CLEC20AQ6ZU45 233 aa11.53□□□□□ -0.56
NDEL1-208ENST00000580237 PAQR9Q6ZVX9 377 aa11.53□□□□□ -0.56
NDEL1-208ENST00000580237 FAM114A1Q8IWE2 563 aa11.53□□□□□ -0.56
NDEL1-208ENST00000580237 TRIM59Q8IWR1 403 aa11.53□□□□□ -0.56
NDEL1-208ENST00000580237 SCAMP5Q8TAC9 235 aa11.53□□□□□ -0.56
NDEL1-208ENST00000580237 SH3RF2Q8TEC5 729 aa11.53□□□□□ -0.56
NDEL1-208ENST00000580237 OVCA2Q8WZ82 227 aa11.53□□□□□ -0.56
NDEL1-208ENST00000580237 ATOH1Q92858 354 aaPredicted RBP11.53□□□□□ -0.56
NDEL1-208ENST00000580237 TATDN2Q93075 761 aa11.53□□□□□ -0.56
NDEL1-208ENST00000580237 TMEM176AQ96HP8 235 aa11.53□□□□□ -0.56
NDEL1-208ENST00000580237 SLC22A12Q96S37 553 aa11.53□□□□□ -0.56
NDEL1-208ENST00000580237 CYP2S1Q96SQ9 504 aa11.53□□□□□ -0.56
NDEL1-208ENST00000580237 NELL2Q99435 816 aa11.53□□□□□ -0.56
NDEL1-208ENST00000580237 HNRNPABQ99729 332 aaKnown RBP11.53□□□□□ -0.56
NDEL1-208ENST00000580237 SMOQ99835 787 aa11.53□□□□□ -0.56
NDEL1-208ENST00000580237 DDX23Q9BUQ8 820 aaKnown RBP11.53□□□□□ -0.56
NDEL1-208ENST00000580237 FAM124BQ9H5Z6 455 aaPredicted RBP11.53□□□□□ -0.56
NDEL1-208ENST00000580237 C8orf33Q9H7E9 229 aaPredicted RBP11.53□□□□□ -0.56
NDEL1-208ENST00000580237 SPATA6Q9NWH7 488 aaPredicted RBP11.53□□□□□ -0.56
NDEL1-208ENST00000580237 SMPD4Q9NXE4 827 aa11.53□□□□□ -0.56
NDEL1-208ENST00000580237 GTSE1Q9NYZ3 720 aa11.53□□□□□ -0.56
NDEL1-208ENST00000580237 GMIPQ9P107 970 aa11.53□□□□□ -0.56
NDEL1-208ENST00000580237 GCNT4Q9P109 453 aa11.53□□□□□ -0.56
NDEL1-208ENST00000580237 COQ4Q9Y3A0 265 aa11.53□□□□□ -0.56
NDEL1-208ENST00000580237 MYOFQ9NZM1 2061 aa11.53□□□□□ -0.56
NDEL1-208ENST00000580237 SPECC1L-ADORA2AF8WAN1 911 aa11.52□□□□□ -0.57
NDEL1-208ENST00000580237 ARNTLO00327 626 aa11.52□□□□□ -0.57
NDEL1-208ENST00000580237 P4HA2O15460 535 aa11.52□□□□□ -0.57
NDEL1-208ENST00000580237 GLULP15104 373 aa11.52□□□□□ -0.57
NDEL1-208ENST00000580237 CTHP32929 405 aa11.52□□□□□ -0.57
NDEL1-208ENST00000580237 MAGEA9P43362 315 aa11.52□□□□□ -0.57
NDEL1-208ENST00000580237 MTIF2P46199 727 aaKnown RBP11.52□□□□□ -0.57
NDEL1-208ENST00000580237 MCCD1P59942 119 aaPredicted RBP11.52□□□□□ -0.57
NDEL1-208ENST00000580237 TNK2Q07912 1038 aa11.52□□□□□ -0.57
NDEL1-208ENST00000580237 KCNH2Q12809 1159 aa11.52□□□□□ -0.57
NDEL1-208ENST00000580237 TCF15Q12870 199 aa11.52□□□□□ -0.57
NDEL1-208ENST00000580237 LRRC32Q14392 662 aa11.52□□□□□ -0.57
NDEL1-208ENST00000580237 PDGFRLQ15198 375 aa11.52□□□□□ -0.57
NDEL1-208ENST00000580237 ANGPT1Q15389 498 aa11.52□□□□□ -0.57
NDEL1-208ENST00000580237 ZNF77Q15935 545 aa11.52□□□□□ -0.57
NDEL1-208ENST00000580237 GOLGA7BQ2TAP0 167 aa11.52□□□□□ -0.57
NDEL1-208ENST00000580237 DPCR1Q3MIW9 517 aa11.52□□□□□ -0.57
NDEL1-208ENST00000580237 PPP1R26Q5T8A7 1209 aaPredicted RBP11.52□□□□□ -0.57
NDEL1-208ENST00000580237 TRIM68Q6AZZ1 485 aa11.52□□□□□ -0.57
NDEL1-208ENST00000580237 RALGPS2Q86X27 583 aaPredicted RBP11.52□□□□□ -0.57
NDEL1-208ENST00000580237 DDX42Q86XP3 938 aaKnown RBP eCLIP11.52□□□□□ -0.57
NDEL1-208ENST00000580237 CPA6Q8N4T0 437 aa11.52□□□□□ -0.57
NDEL1-208ENST00000580237 WHAMMQ8TF30 809 aa11.52□□□□□ -0.57
NDEL1-208ENST00000580237 ATP2A3Q93084 1043 aa11.52□□□□□ -0.57
NDEL1-208ENST00000580237 LRRC3BQ96PB8 259 aa11.52□□□□□ -0.57
NDEL1-208ENST00000580237 OSBPL6Q9BZF3 934 aa11.52□□□□□ -0.57
NDEL1-208ENST00000580237 EBF3Q9H4W6 596 aa11.52□□□□□ -0.57
NDEL1-208ENST00000580237 TLR8Q9NR97 1041 aaKnown RBP11.52□□□□□ -0.57
NDEL1-208ENST00000580237 GKN1Q9NS71 199 aa11.52□□□□□ -0.57
NDEL1-208ENST00000580237 LMBRD1Q9NUN5 540 aa11.52□□□□□ -0.57
NDEL1-208ENST00000580237 FAM86C1Q9NVL1 165 aa11.52□□□□□ -0.57
NDEL1-208ENST00000580237 COMMD8Q9NX08 183 aa11.52□□□□□ -0.57
NDEL1-208ENST00000580237 DUS2Q9NX74 493 aaKnown RBP11.52□□□□□ -0.57
NDEL1-208ENST00000580237 HESX1Q9UBX0 185 aa11.52□□□□□ -0.57
NDEL1-208ENST00000580237 ARHGAP26Q9UNA1 814 aa11.52□□□□□ -0.57
NDEL1-208ENST00000580237 PCDHB4Q9Y5E5 795 aa11.52□□□□□ -0.57
NDEL1-208ENST00000580237 CPQQ9Y646 472 aa11.52□□□□□ -0.57
NDEL1-208ENST00000580237 WNT6Q9Y6F9 365 aa11.52□□□□□ -0.57
NDEL1-208ENST00000580237 FANCMQ8IYD8 2048 aa11.52□□□□□ -0.57
NDEL1-208ENST00000580237 LAMTOR5O43504 91 aa11.51□□□□□ -0.57
NDEL1-208ENST00000580237 BEST1O76090 585 aa11.51□□□□□ -0.57
NDEL1-208ENST00000580237 OAS1P00973 400 aaKnown RBP11.51□□□□□ -0.57
NDEL1-208ENST00000580237 ACO1P21399 889 aaKnown RBP11.51□□□□□ -0.57
NDEL1-208ENST00000580237 RAD23BP54727 409 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms