RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 DHCR24Q15392 516 aa19.06■□□□□ 0.64
MKS1-209ENST00000580127 CRY1Q16526 586 aa19.06■□□□□ 0.64
MKS1-209ENST00000580127 EOGTQ5NDL2 527 aa19.06■□□□□ 0.64
MKS1-209ENST00000580127 BTBD8Q5XKL5 378 aa19.06■□□□□ 0.64
MKS1-209ENST00000580127 PMS2CLQ68D20 193 aa19.06■□□□□ 0.64
MKS1-209ENST00000580127 PSAPL1Q6NUJ1 521 aa19.06■□□□□ 0.64
MKS1-209ENST00000580127 FAM173BQ6P4H8 233 aa19.06■□□□□ 0.64
MKS1-209ENST00000580127 LPCAT2Q7L5N7 544 aa19.06■□□□□ 0.64
MKS1-209ENST00000580127 RASSF3Q86WH2 238 aa19.06■□□□□ 0.64
MKS1-209ENST00000580127 ZNF507Q8TCN5 953 aa19.06■□□□□ 0.64
MKS1-209ENST00000580127 EZH1Q92800 747 aaPredicted RBP19.06■□□□□ 0.64
MKS1-209ENST00000580127 CCDC127Q96BQ5 260 aa19.06■□□□□ 0.64
MKS1-209ENST00000580127 OTUB2Q96DC9 234 aa19.06■□□□□ 0.64
MKS1-209ENST00000580127 INTS4Q96HW7 963 aaKnown RBP19.06■□□□□ 0.64
MKS1-209ENST00000580127 ZNF396Q96N95 335 aaPredicted RBP19.06■□□□□ 0.64
MKS1-209ENST00000580127 CGNQ9P2M7 1197 aaKnown RBP19.06■□□□□ 0.64
MKS1-209ENST00000580127 CIZ1Q9ULV3 898 aaPredicted RBP19.06■□□□□ 0.64
MKS1-209ENST00000580127 NUP205Q92621 2012 aa19.06■□□□□ 0.64
MKS1-209ENST00000580127 A8MXQ7 604 aa19.05■□□□□ 0.64
MKS1-209ENST00000580127 MBL2P11226 248 aaPredicted RBP19.05■□□□□ 0.64
MKS1-209ENST00000580127 ATICP31939 592 aa19.05■□□□□ 0.64
MKS1-209ENST00000580127 GRIA2P42262 883 aa19.05■□□□□ 0.64
MKS1-209ENST00000580127 USP46P62068 366 aa19.05■□□□□ 0.64
MKS1-209ENST00000580127 ASIC1P78348 528 aa19.05■□□□□ 0.64
MKS1-209ENST00000580127 LMAN2Q12907 356 aa19.05■□□□□ 0.64
MKS1-209ENST00000580127 PSMD6Q15008 389 aa19.05■□□□□ 0.64
MKS1-209ENST00000580127 NUP93Q8N1F7 819 aa19.05■□□□□ 0.64
MKS1-209ENST00000580127 XXYLT1Q8NBI6 393 aa19.05■□□□□ 0.64
MKS1-209ENST00000580127 KCNV2Q8TDN2 545 aa19.05■□□□□ 0.64
MKS1-209ENST00000580127 WHAMMQ8TF30 809 aa19.05■□□□□ 0.64
MKS1-209ENST00000580127 OVCA2Q8WZ82 227 aa19.05■□□□□ 0.64
MKS1-209ENST00000580127 SYAP1Q96A49 352 aaPredicted RBP19.05■□□□□ 0.64
MKS1-209ENST00000580127 USP28Q96RU2 1077 aa19.05■□□□□ 0.64
MKS1-209ENST00000580127 FGFBP2Q9BYJ0 223 aa19.05■□□□□ 0.64
MKS1-209ENST00000580127 TPSD1Q9BZJ3 242 aa19.05■□□□□ 0.64
MKS1-209ENST00000580127 RNF38Q9H0F5 515 aa19.05■□□□□ 0.64
MKS1-209ENST00000580127 KBTBD4Q9NVX7 518 aa19.05■□□□□ 0.64
MKS1-209ENST00000580127 BCCIPQ9P287 314 aaKnown RBP eCLIP19.05■□□□□ 0.64
MKS1-209ENST00000580127 CFAP97Q9P2B7 532 aa19.05■□□□□ 0.64
MKS1-209ENST00000580127 CPQQ9Y646 472 aa19.05■□□□□ 0.64
MKS1-209ENST00000580127 HELZP42694 1942 aaKnown RBP19.05■□□□□ 0.64
MKS1-209ENST00000580127 A0A0A0MRY4 1105 aa19.04■□□□□ 0.64
MKS1-209ENST00000580127 E2F8A0AVK6 867 aa19.04■□□□□ 0.64
MKS1-209ENST00000580127 KAT7O95251 611 aa19.04■□□□□ 0.64
MKS1-209ENST00000580127 CST3P01034 146 aaPredicted RBP19.04■□□□□ 0.64
MKS1-209ENST00000580127 CYP17A1P05093 508 aa19.04■□□□□ 0.64
MKS1-209ENST00000580127 CEACAM1P13688 526 aa19.04■□□□□ 0.64
MKS1-209ENST00000580127 GAD2Q05329 585 aa19.04■□□□□ 0.64
MKS1-209ENST00000580127 CCDC142Q17RM4 750 aa19.04■□□□□ 0.64
MKS1-209ENST00000580127 SPDYCQ5MJ68 293 aa19.04■□□□□ 0.64
MKS1-209ENST00000580127 SCARA3Q6AZY7 606 aa19.04■□□□□ 0.64
MKS1-209ENST00000580127 TCEAL6Q6IPX3 200 aa19.04■□□□□ 0.64
MKS1-209ENST00000580127 TRMT11Q7Z4G4 463 aaKnown RBP19.04■□□□□ 0.64
MKS1-209ENST00000580127 PGBD3Q8N328 593 aa19.04■□□□□ 0.64
MKS1-209ENST00000580127 PIGKQ92643 395 aa19.04■□□□□ 0.64
MKS1-209ENST00000580127 TCEAL3Q969E4 200 aa19.04■□□□□ 0.64
MKS1-209ENST00000580127 FAM84AQ96KN4 292 aa19.04■□□□□ 0.64
MKS1-209ENST00000580127 CGRRF1Q99675 332 aa19.04■□□□□ 0.64
MKS1-209ENST00000580127 MRPL45Q9BRJ2 306 aaKnown RBP19.04■□□□□ 0.64
MKS1-209ENST00000580127 NUSAP1Q9BXS6 441 aaKnown RBP19.04■□□□□ 0.64
MKS1-209ENST00000580127 TRIM9Q9C026 710 aa19.04■□□□□ 0.64
MKS1-209ENST00000580127 SMPD4Q9NXE4 827 aa19.04■□□□□ 0.64
MKS1-209ENST00000580127 A0A087X0B3 334 aa19.03■□□□□ 0.64
MKS1-209ENST00000580127 SPTLC2O15270 562 aa19.03■□□□□ 0.64
MKS1-209ENST00000580127 CLSTN1O94985 981 aa19.03■□□□□ 0.64
MKS1-209ENST00000580127 KLF8O95600 359 aaPredicted RBP19.03■□□□□ 0.64
MKS1-209ENST00000580127 ADH5P11766 374 aa19.03■□□□□ 0.64
MKS1-209ENST00000580127 TRIM21P19474 475 aaKnown RBP19.03■□□□□ 0.64
MKS1-209ENST00000580127 CYP2J2P51589 502 aa19.03■□□□□ 0.64
MKS1-209ENST00000580127 AP3M2P53677 418 aa19.03■□□□□ 0.64
MKS1-209ENST00000580127 IFRD2Q12894 506 aaPredicted RBP19.03■□□□□ 0.64
MKS1-209ENST00000580127 FAM26FQ5R3K3 315 aa19.03■□□□□ 0.64
MKS1-209ENST00000580127 HECTD3Q5T447 861 aa19.03■□□□□ 0.64
MKS1-209ENST00000580127 TXNDC5Q8NBS9 432 aaKnown RBP19.03■□□□□ 0.64
MKS1-209ENST00000580127 TNIP3Q96KP6 325 aa19.03■□□□□ 0.64
MKS1-209ENST00000580127 NACA2Q9H009 215 aa19.03■□□□□ 0.64
MKS1-209ENST00000580127 MAGEF1Q9HAY2 307 aa19.03■□□□□ 0.64
MKS1-209ENST00000580127 ARHGEF4Q9NR80 690 aa19.03■□□□□ 0.64
MKS1-209ENST00000580127 AGPAT3Q9NRZ7 376 aa19.03■□□□□ 0.64
MKS1-209ENST00000580127 COMMD8Q9NX08 183 aa19.03■□□□□ 0.64
MKS1-209ENST00000580127 NXF1Q9UBU9 619 aaKnown RBP19.03■□□□□ 0.64
MKS1-209ENST00000580127 SH3BP1Q9Y3L3 701 aa19.03■□□□□ 0.64
MKS1-209ENST00000580127 UBE4BO95155 1302 aa19.02■□□□□ 0.64
MKS1-209ENST00000580127 PTPRJQ12913 1337 aa19.02■□□□□ 0.64
MKS1-209ENST00000580127 LNP1A1A4G5 178 aa19.02■□□□□ 0.64
MKS1-209ENST00000580127 TBC1D3BA6NDS4 549 aa19.02■□□□□ 0.64
MKS1-209ENST00000580127 TNFRSF10BO14763 440 aa19.02■□□□□ 0.64
MKS1-209ENST00000580127 STX6O43752 255 aa19.02■□□□□ 0.64
MKS1-209ENST00000580127 PPP6R2O75170 966 aa19.02■□□□□ 0.64
MKS1-209ENST00000580127 STAU1O95793 577 aaKnown RBP19.02■□□□□ 0.64
MKS1-209ENST00000580127 OLFM2O95897 454 aa19.02■□□□□ 0.64
MKS1-209ENST00000580127 OAS1P00973 400 aaKnown RBP19.02■□□□□ 0.64
MKS1-209ENST00000580127 CSRP1P21291 193 aaKnown RBP19.02■□□□□ 0.64
MKS1-209ENST00000580127 TIE1P35590 1138 aa19.02■□□□□ 0.64
MKS1-209ENST00000580127 NASPP49321 788 aaPredicted RBP19.02■□□□□ 0.64
MKS1-209ENST00000580127 CYP24A1Q07973 514 aa19.02■□□□□ 0.64
MKS1-209ENST00000580127 CNNM4Q6P4Q7 775 aa19.02■□□□□ 0.64
MKS1-209ENST00000580127 RHBDF2Q6PJF5 856 aa19.02■□□□□ 0.64
MKS1-209ENST00000580127 ALLCQ8N6M5 410 aa19.02■□□□□ 0.64
MKS1-209ENST00000580127 B3GALNT2Q8NCR0 500 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms