RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 NPHS2Q9NP85 383 aa10.97□□□□□ -0.65
TOP3A-209ENST00000580095 NGRNQ9NPE2 291 aaKnown RBP10.97□□□□□ -0.65
TOP3A-209ENST00000580095 UBN1Q9NPG3 1134 aa10.97□□□□□ -0.65
TOP3A-209ENST00000580095 C2orf71A6NGG8 1288 aa10.97□□□□□ -0.65
TOP3A-209ENST00000580095 RNF8O76064 485 aa10.97□□□□□ -0.65
TOP3A-209ENST00000580095 KRT7P08729 469 aa10.97□□□□□ -0.65
TOP3A-209ENST00000580095 ABHD2P08910 425 aa10.97□□□□□ -0.65
TOP3A-209ENST00000580095 ARF4P18085 180 aaPredicted RBP10.97□□□□□ -0.65
TOP3A-209ENST00000580095 GLRA4Q5JXX5 417 aa10.97□□□□□ -0.65
TOP3A-209ENST00000580095 BBS12Q6ZW61 710 aa10.97□□□□□ -0.65
TOP3A-209ENST00000580095 PPIL6Q8IXY8 311 aa10.97□□□□□ -0.65
TOP3A-209ENST00000580095 NAT8LQ8N9F0 302 aa10.97□□□□□ -0.65
TOP3A-209ENST00000580095 AGAP11Q8TF27 550 aa10.97□□□□□ -0.65
TOP3A-209ENST00000580095 RXFP2Q8WXD0 754 aa10.97□□□□□ -0.65
TOP3A-209ENST00000580095 TACO1Q9BSH4 297 aaKnown RBP10.97□□□□□ -0.65
TOP3A-209ENST00000580095 MIS12Q9H081 205 aa10.97□□□□□ -0.65
TOP3A-209ENST00000580095 HAO1Q9UJM8 370 aa10.97□□□□□ -0.65
TOP3A-209ENST00000580095 STRIP2Q9ULQ0 834 aa10.97□□□□□ -0.65
TOP3A-209ENST00000580095 SHOC2Q9UQ13 582 aa10.97□□□□□ -0.65
TOP3A-209ENST00000580095 NUMBLQ9Y6R0 609 aa10.97□□□□□ -0.65
TOP3A-209ENST00000580095 MCM3APO60318 1980 aa10.96□□□□□ -0.65
TOP3A-209ENST00000580095 H7C0C1 242 aa10.96□□□□□ -0.65
TOP3A-209ENST00000580095 CILPO75339 1184 aa10.96□□□□□ -0.65
TOP3A-209ENST00000580095 CBX6O95503 412 aa10.96□□□□□ -0.65
TOP3A-209ENST00000580095 C22orf31O95567 290 aa10.96□□□□□ -0.65
TOP3A-209ENST00000580095 ELK3P41970 407 aa10.96□□□□□ -0.65
TOP3A-209ENST00000580095 GPD2P43304 727 aa10.96□□□□□ -0.65
TOP3A-209ENST00000580095 ATP5OP48047 213 aa10.96□□□□□ -0.65
TOP3A-209ENST00000580095 ATXN1P54253 815 aaKnown RBP10.96□□□□□ -0.65
TOP3A-209ENST00000580095 ARL4CP56559 192 aa10.96□□□□□ -0.65
TOP3A-209ENST00000580095 GEMIN4P57678 1058 aaKnown RBP10.96□□□□□ -0.65
TOP3A-209ENST00000580095 SPARCL1Q14515 664 aa10.96□□□□□ -0.65
TOP3A-209ENST00000580095 PPP6R3Q5H9R7 873 aaPredicted RBP10.96□□□□□ -0.65
TOP3A-209ENST00000580095 CCDC62Q6P9F0 684 aa10.96□□□□□ -0.65
TOP3A-209ENST00000580095 VSIG1Q86XK7 387 aa10.96□□□□□ -0.65
TOP3A-209ENST00000580095 NIPA2Q8N8Q9 360 aa10.96□□□□□ -0.65
TOP3A-209ENST00000580095 CCHCR1Q8TD31 782 aa10.96□□□□□ -0.65
TOP3A-209ENST00000580095 LRRC8CQ8TDW0 803 aa10.96□□□□□ -0.65
TOP3A-209ENST00000580095 NLRP7Q8WX94 980 aa10.96□□□□□ -0.65
TOP3A-209ENST00000580095 CFAP36Q96G28 342 aa10.96□□□□□ -0.65
TOP3A-209ENST00000580095 C2orf40Q9H1Z8 148 aa10.96□□□□□ -0.65
TOP3A-209ENST00000580095 RXFP1Q9HBX9 757 aa10.96□□□□□ -0.65
TOP3A-209ENST00000580095 PSMC3IPQ9P2W1 217 aaPredicted RBP10.96□□□□□ -0.65
TOP3A-209ENST00000580095 CHKBQ9Y259 395 aa10.96□□□□□ -0.65
TOP3A-209ENST00000580095 EVPLQ92817 2033 aa10.96□□□□□ -0.65
TOP3A-209ENST00000580095 KAT6AQ92794 2004 aa10.96□□□□□ -0.66
TOP3A-209ENST00000580095 TRUB2O95900 331 aaKnown RBP10.96□□□□□ -0.66
TOP3A-209ENST00000580095 GSTA1P08263 222 aa10.96□□□□□ -0.66
TOP3A-209ENST00000580095 FAM163BP0C2L3 166 aa10.96□□□□□ -0.66
TOP3A-209ENST00000580095 YWHAGP61981 247 aaKnown RBP eCLIP10.96□□□□□ -0.66
TOP3A-209ENST00000580095 CA9Q16790 459 aa10.96□□□□□ -0.66
TOP3A-209ENST00000580095 FAM183BPQ6ZVS7 135 aa10.96□□□□□ -0.66
TOP3A-209ENST00000580095 ILDR2Q71H61 639 aa10.96□□□□□ -0.66
TOP3A-209ENST00000580095 ACOT1Q86TX2 421 aa10.96□□□□□ -0.66
TOP3A-209ENST00000580095 AGGF1Q8N302 714 aaeCLIP10.96□□□□□ -0.66
TOP3A-209ENST00000580095 TCP10LQ8TDR4 215 aa10.96□□□□□ -0.66
TOP3A-209ENST00000580095 AFG1LQ8WV93 481 aa10.96□□□□□ -0.66
TOP3A-209ENST00000580095 PTPRN2Q92932 1015 aa10.96□□□□□ -0.66
TOP3A-209ENST00000580095 TTC25Q96NG3 672 aa10.96□□□□□ -0.66
TOP3A-209ENST00000580095 BCO2Q9BYV7 579 aa10.96□□□□□ -0.66
TOP3A-209ENST00000580095 PDZD7Q9H5P4 517 aa10.96□□□□□ -0.66
TOP3A-209ENST00000580095 TSPAN16Q9UKR8 245 aa10.96□□□□□ -0.66
TOP3A-209ENST00000580095 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.96□□□□□ -0.66
TOP3A-209ENST00000580095 MCF2LO15068 1137 aa10.95□□□□□ -0.66
TOP3A-209ENST00000580095 MED7O43513 233 aa10.95□□□□□ -0.66
TOP3A-209ENST00000580095 TYROBPO43914 113 aa10.95□□□□□ -0.66
TOP3A-209ENST00000580095 LGR5O75473 907 aa10.95□□□□□ -0.66
TOP3A-209ENST00000580095 TAP1Q03518 808 aa10.95□□□□□ -0.66
TOP3A-209ENST00000580095 DPYSL3Q14195 570 aa10.95□□□□□ -0.66
TOP3A-209ENST00000580095 PLEKHG4Q58EX7 1191 aa10.95□□□□□ -0.66
TOP3A-209ENST00000580095 PRPF39Q86UA1 669 aaKnown RBP10.95□□□□□ -0.66
TOP3A-209ENST00000580095 GPC2Q8N158 579 aa10.95□□□□□ -0.66
TOP3A-209ENST00000580095 CXorf38Q8TB03 319 aa10.95□□□□□ -0.66
TOP3A-209ENST00000580095 DCPSQ96C86 337 aaKnown RBP10.95□□□□□ -0.66
TOP3A-209ENST00000580095 SMARCAD1Q9H4L7 1026 aa10.95□□□□□ -0.66
TOP3A-209ENST00000580095 RAB6BQ9NRW1 208 aa10.95□□□□□ -0.66
TOP3A-209ENST00000580095 PIH1D1Q9NWS0 290 aaKnown RBP10.95□□□□□ -0.66
TOP3A-209ENST00000580095 EIF4E1BA6NMX2 242 aaKnown RBP10.95□□□□□ -0.66
TOP3A-209ENST00000580095 KBTBD13C9JR72 458 aa10.95□□□□□ -0.66
TOP3A-209ENST00000580095 HMGCRP04035 888 aa10.95□□□□□ -0.66
TOP3A-209ENST00000580095 CDC25CP30307 473 aa10.95□□□□□ -0.66
TOP3A-209ENST00000580095 GRM1Q13255 1194 aa10.95□□□□□ -0.66
TOP3A-209ENST00000580095 SEPT7Q16181 437 aaKnown RBP10.95□□□□□ -0.66
TOP3A-209ENST00000580095 CCDC142Q17RM4 750 aa10.95□□□□□ -0.66
TOP3A-209ENST00000580095 KIZQ2M2Z5 673 aa10.95□□□□□ -0.66
TOP3A-209ENST00000580095 KBTBD12Q3ZCT8 623 aa10.95□□□□□ -0.66
TOP3A-209ENST00000580095 PMF1Q6P1K2 205 aa10.95□□□□□ -0.66
TOP3A-209ENST00000580095 OTOAQ7RTW8 1153 aa10.95□□□□□ -0.66
TOP3A-209ENST00000580095 PLPPR4Q7Z2D5 763 aa10.95□□□□□ -0.66
TOP3A-209ENST00000580095 POLNQ7Z5Q5 900 aa10.95□□□□□ -0.66
TOP3A-209ENST00000580095 PDIK1LQ8N165 341 aa10.95□□□□□ -0.66
TOP3A-209ENST00000580095 C7orf31Q8N865 590 aa10.95□□□□□ -0.66
TOP3A-209ENST00000580095 ATP11CQ8NB49 1132 aa10.95□□□□□ -0.66
TOP3A-209ENST00000580095 ZNF75CPQ92670 426 aaPredicted RBP10.95□□□□□ -0.66
TOP3A-209ENST00000580095 APOL6Q9BWW8 343 aa10.95□□□□□ -0.66
TOP3A-209ENST00000580095 LHX5Q9H2C1 402 aa10.95□□□□□ -0.66
TOP3A-209ENST00000580095 TNFSF13BQ9Y275 285 aa10.95□□□□□ -0.66
TOP3A-209ENST00000580095 A0A0G2JLL6 359 aaPredicted RBP10.95□□□□□ -0.66
TOP3A-209ENST00000580095 KCNN4O15554 427 aa10.95□□□□□ -0.66
TOP3A-209ENST00000580095 MSH2P43246 934 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms