RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 ADAMTS15Q8TE58 950 aa3.5□□□□□ -1.85
KPNB1-208ENST00000580019 SH3RF2Q8TEC5 729 aa3.5□□□□□ -1.85
KPNB1-208ENST00000580019 HERVK_113Q902F9 699 aa3.5□□□□□ -1.85
KPNB1-208ENST00000580019 KAT5Q92993 513 aa3.5□□□□□ -1.85
KPNB1-208ENST00000580019 LPPQ93052 612 aa3.5□□□□□ -1.85
KPNB1-208ENST00000580019 IQCDQ96DY2 449 aa3.5□□□□□ -1.85
KPNB1-208ENST00000580019 SLC35A4Q96G79 324 aa3.5□□□□□ -1.85
KPNB1-208ENST00000580019 ASB2Q96Q27 587 aa3.5□□□□□ -1.85
KPNB1-208ENST00000580019 C7orf25Q9BPX7 421 aa3.5□□□□□ -1.85
KPNB1-208ENST00000580019 MYL10Q9BUA6 226 aa3.5□□□□□ -1.85
KPNB1-208ENST00000580019 MRPL9Q9BYD2 267 aaKnown RBP3.5□□□□□ -1.85
KPNB1-208ENST00000580019 DHX36Q9H2U1 1008 aaKnown RBP3.5□□□□□ -1.85
KPNB1-208ENST00000580019 POFUT1Q9H488 388 aa3.5□□□□□ -1.85
KPNB1-208ENST00000580019 GREM2Q9H772 168 aa3.5□□□□□ -1.85
KPNB1-208ENST00000580019 SARS2Q9NP81 518 aaKnown RBP3.5□□□□□ -1.85
KPNB1-208ENST00000580019 INCENPQ9NQS7 918 aa3.5□□□□□ -1.85
KPNB1-208ENST00000580019 MRGBPQ9NV56 204 aa3.5□□□□□ -1.85
KPNB1-208ENST00000580019 PNPOQ9NVS9 261 aa3.5□□□□□ -1.85
KPNB1-208ENST00000580019 PIH1D1Q9NWS0 290 aaKnown RBP3.5□□□□□ -1.85
KPNB1-208ENST00000580019 CPNE7Q9UBL6 633 aa3.5□□□□□ -1.85
KPNB1-208ENST00000580019 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.5□□□□□ -1.85
KPNB1-208ENST00000580019 GIMAP2Q9UG22 337 aa3.5□□□□□ -1.85
KPNB1-208ENST00000580019 STAP2Q9UGK3 403 aa3.5□□□□□ -1.85
KPNB1-208ENST00000580019 AFF4Q9UHB7 1163 aaKnown RBP3.5□□□□□ -1.85
KPNB1-208ENST00000580019 PRSS50Q9UI38 385 aa3.5□□□□□ -1.85
KPNB1-208ENST00000580019 TMPRSS11EQ9UL52 423 aa3.5□□□□□ -1.85
KPNB1-208ENST00000580019 MAN2B2Q9Y2E5 1009 aa3.5□□□□□ -1.85
KPNB1-208ENST00000580019 SNX5Q9Y5X3 404 aa3.5□□□□□ -1.85
KPNB1-208ENST00000580019 LTBP4Q8N2S1 1624 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 MAP3K4Q9Y6R4 1608 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 GTPBP10A4D1E9 387 aaKnown RBP3.49□□□□□ -1.85
KPNB1-208ENST00000580019 PI4KAP2A4QPH2 592 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 FAM171A2A8MVW0 826 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 H7C0S8 307 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 SGTAO43765 313 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 TMEM127O75204 238 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 IPO13O94829 963 aaKnown RBP3.49□□□□□ -1.85
KPNB1-208ENST00000580019 FSBPO95073 299 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 SCAF4O95104 1147 aaKnown RBP3.49□□□□□ -1.85
KPNB1-208ENST00000580019 STARD3NLO95772 234 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 ANXA2P07355 339 aaKnown RBP3.49□□□□□ -1.85
KPNB1-208ENST00000580019 TYRP14679 529 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 GYPEP15421 78 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 MCAMP43121 646 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 MMP14P50281 582 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 RNASE9P60153 205 aaKnown RBP3.49□□□□□ -1.85
KPNB1-208ENST00000580019 CCT2P78371 535 aaKnown RBP3.49□□□□□ -1.85
KPNB1-208ENST00000580019 ATP2C1P98194 919 aaPredicted RBP3.49□□□□□ -1.85
KPNB1-208ENST00000580019 UBE3AQ05086 875 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 WASHC5Q12768 1159 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 FOXI1Q12951 378 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 CUL4AQ13619 759 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 PLS1Q14651 629 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 DLGAP5Q15398 846 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 ADRM1Q16186 407 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 CATSPEREQ5SY80 951 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 GJC2Q5T442 439 aaPredicted RBP3.49□□□□□ -1.85
KPNB1-208ENST00000580019 BTBD8Q5XKL5 378 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 LMBRD2Q68DH5 695 aaPredicted RBP3.49□□□□□ -1.85
KPNB1-208ENST00000580019 KIAA1841Q6NSI8 718 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 BTNL9Q6UXG8 535 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 ZNF517Q6ZMY9 492 aaPredicted RBP3.49□□□□□ -1.85
KPNB1-208ENST00000580019 CATSPERGQ6ZRH7 1159 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 CPOQ8IVL8 374 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 ARHGEF19Q8IW93 802 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 CCDC117Q8IWD4 279 aaPredicted RBP3.49□□□□□ -1.85
KPNB1-208ENST00000580019 ELOA2Q8IYF1 753 aaPredicted RBP3.49□□□□□ -1.85
KPNB1-208ENST00000580019 NRSN1Q8IZ57 195 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 MB21D1Q8N884 522 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 ARL10Q8N8L6 244 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 CCDC150Q8NCX0 1101 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 OTUD7AQ8TE49 926 aaPredicted RBP3.49□□□□□ -1.85
KPNB1-208ENST00000580019 DPF2Q92785 391 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 NMD3Q96D46 503 aaKnown RBP3.49□□□□□ -1.85
KPNB1-208ENST00000580019 EID2BQ96D98 161 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 RADILQ96JH8 1075 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 SPATA17Q96L03 361 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 DUSP26Q9BV47 211 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 KATNAL1Q9BW62 490 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 PAIP1Q9H074 479 aaKnown RBP3.49□□□□□ -1.85
KPNB1-208ENST00000580019 GHITMQ9H3K2 345 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 ZWILCHQ9H900 591 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 TMEM8AQ9HCN3 771 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 SEPSECSQ9HD40 501 aaKnown RBP3.49□□□□□ -1.85
KPNB1-208ENST00000580019 NECTIN3Q9NQS3 549 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 PLSCR4Q9NRQ2 329 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 KRT84Q9NSB2 600 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 SACM1LQ9NTJ5 587 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 GJB4Q9NTQ9 266 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 HAUS2Q9NVX0 235 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 GALNT8Q9NY28 637 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 CPA4Q9UI42 421 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 HERC5Q9UII4 1024 aaKnown RBP3.49□□□□□ -1.85
KPNB1-208ENST00000580019 DENND2AQ9ULE3 1009 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 ARHGAP26Q9UNA1 814 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 RRP7AQ9Y3A4 280 aaKnown RBP3.49□□□□□ -1.85
KPNB1-208ENST00000580019 PCDHB1Q9Y5F3 818 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 PCDHA13Q9Y5I0 950 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 CDY2AQ9Y6F7 541 aa3.49□□□□□ -1.85
KPNB1-208ENST00000580019 PTPRTO14522 1441 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms