RNA–Protein interactions for RNA: ENST00000579727.5

RARA-209, Transcript of retinoic acid receptor alpha, humanhuman

TSL 4

Gene RARA, Length 564 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-209ENST00000579727 ABL1P00519 1130 aa17.29■□□□□ 0.36
RARA-209ENST00000579727 SRFP11831 508 aa17.29■□□□□ 0.36
RARA-209ENST00000579727 EEF1GP26641 437 aaKnown RBP17.29■□□□□ 0.36
RARA-209ENST00000579727 PTPN5P54829 565 aa17.29■□□□□ 0.36
RARA-209ENST00000579727 GCNT1Q02742 428 aa17.29■□□□□ 0.36
RARA-209ENST00000579727 TAF10Q12962 218 aa17.29■□□□□ 0.36
RARA-209ENST00000579727 ARHGAP44Q17R89 818 aa17.29■□□□□ 0.36
RARA-209ENST00000579727 EXOC3L4Q17RC7 722 aa17.29■□□□□ 0.36
RARA-209ENST00000579727 SLC22A12Q96S37 553 aa17.29■□□□□ 0.36
RARA-209ENST00000579727 CYP2S1Q96SQ9 504 aa17.29■□□□□ 0.36
RARA-209ENST00000579727 TTLL2Q9BWV7 592 aa17.29■□□□□ 0.36
RARA-209ENST00000579727 CSNK1G1Q9HCP0 422 aa17.29■□□□□ 0.36
RARA-209ENST00000579727 FAM86C1Q9NVL1 165 aa17.29■□□□□ 0.36
RARA-209ENST00000579727 KRT5P13647 590 aa17.28■□□□□ 0.36
RARA-209ENST00000579727 NPR3P17342 541 aa17.28■□□□□ 0.36
RARA-209ENST00000579727 PTMSP20962 102 aa17.28■□□□□ 0.36
RARA-209ENST00000579727 PON1P27169 355 aa17.28■□□□□ 0.36
RARA-209ENST00000579727 YWHAQP27348 245 aa17.28■□□□□ 0.36
RARA-209ENST00000579727 AVPR1AP37288 418 aa17.28■□□□□ 0.36
RARA-209ENST00000579727 NCAPHQ15003 741 aa17.28■□□□□ 0.36
RARA-209ENST00000579727 KRT31Q15323 416 aa17.28■□□□□ 0.36
RARA-209ENST00000579727 SGO2Q562F6 1265 aa17.28■□□□□ 0.36
RARA-209ENST00000579727 TTC30AQ86WT1 665 aa17.28■□□□□ 0.36
RARA-209ENST00000579727 CMTM8Q8IZV2 173 aa17.28■□□□□ 0.36
RARA-209ENST00000579727 FBXO32Q969P5 355 aa17.28■□□□□ 0.36
RARA-209ENST00000579727 CEP295NLQ96MC4 621 aa17.28■□□□□ 0.36
RARA-209ENST00000579727 SIX2Q9NPC8 291 aa17.28■□□□□ 0.36
RARA-209ENST00000579727 TRPM5Q9NZQ8 1165 aa17.28■□□□□ 0.36
RARA-209ENST00000579727 GMIPQ9P107 970 aa17.28■□□□□ 0.36
RARA-209ENST00000579727 TSPAN16Q9UKR8 245 aa17.28■□□□□ 0.36
RARA-209ENST00000579727 CCL26Q9Y258 94 aa17.28■□□□□ 0.36
RARA-209ENST00000579727 COL4A2P08572 1712 aa17.27■□□□□ 0.36
RARA-209ENST00000579727 GTPBP10A4D1E9 387 aaKnown RBP17.27■□□□□ 0.36
RARA-209ENST00000579727 HHLA1C9JL84 531 aa17.27■□□□□ 0.36
RARA-209ENST00000579727 TULP2O00295 520 aa17.27■□□□□ 0.36
RARA-209ENST00000579727 DPYSL4O14531 572 aa17.27■□□□□ 0.36
RARA-209ENST00000579727 GFRA3O60609 400 aa17.27■□□□□ 0.36
RARA-209ENST00000579727 RTN3O95197 1032 aaPredicted RBP17.27■□□□□ 0.36
RARA-209ENST00000579727 BRD2P25440 801 aaKnown RBP17.27■□□□□ 0.36
RARA-209ENST00000579727 ARHGAP17Q68EM7 881 aa17.27■□□□□ 0.36
RARA-209ENST00000579727 BMP8AQ7Z5Y6 402 aa17.27■□□□□ 0.36
RARA-209ENST00000579727 MON1AQ86VX9 555 aa17.27■□□□□ 0.36
RARA-209ENST00000579727 ARL14EPQ8N8R7 260 aaPredicted RBP17.27■□□□□ 0.36
RARA-209ENST00000579727 UBA3Q8TBC4 463 aa17.27■□□□□ 0.36
RARA-209ENST00000579727 TFAP2BQ92481 460 aa17.27■□□□□ 0.36
RARA-209ENST00000579727 LRRC3BQ96PB8 259 aa17.27■□□□□ 0.36
RARA-209ENST00000579727 ZSWIM1Q9BR11 485 aa17.27■□□□□ 0.36
RARA-209ENST00000579727 FUCA2Q9BTY2 467 aa17.27■□□□□ 0.36
RARA-209ENST00000579727 DUSP16Q9BY84 665 aa17.27■□□□□ 0.36
RARA-209ENST00000579727 FAM124BQ9H5Z6 455 aaPredicted RBP17.27■□□□□ 0.36
RARA-209ENST00000579727 TRPV4Q9HBA0 871 aa17.27■□□□□ 0.36
RARA-209ENST00000579727 EHD2Q9NZN4 543 aa17.27■□□□□ 0.36
RARA-209ENST00000579727 APEX2Q9UBZ4 518 aa17.27■□□□□ 0.36
RARA-209ENST00000579727 CHORDC1Q9UHD1 332 aaPredicted RBP17.27■□□□□ 0.36
RARA-209ENST00000579727 DMDP11532 3685 aa17.27■□□□□ 0.35
RARA-209ENST00000579727 CKMP06732 381 aa17.26■□□□□ 0.35
RARA-209ENST00000579727 PNMA6AP0CW24 399 aaPredicted RBP17.26■□□□□ 0.35
RARA-209ENST00000579727 VDRP11473 427 aa17.26■□□□□ 0.35
RARA-209ENST00000579727 DDX6P26196 483 aaKnown RBP eCLIP17.26■□□□□ 0.35
RARA-209ENST00000579727 GDI1P31150 447 aa17.26■□□□□ 0.35
RARA-209ENST00000579727 USP8P40818 1118 aa17.26■□□□□ 0.35
RARA-209ENST00000579727 PGFP49763 221 aa17.26■□□□□ 0.35
RARA-209ENST00000579727 MFAP3P55082 362 aa17.26■□□□□ 0.35
RARA-209ENST00000579727 KCNMA1Q12791 1236 aa17.26■□□□□ 0.35
RARA-209ENST00000579727 SIX5Q8N196 739 aa17.26■□□□□ 0.35
RARA-209ENST00000579727 RIN3Q8TB24 985 aa17.26■□□□□ 0.35
RARA-209ENST00000579727 USP13Q92995 863 aaPredicted RBP17.26■□□□□ 0.35
RARA-209ENST00000579727 PBXIP1Q96AQ6 731 aa17.26■□□□□ 0.35
RARA-209ENST00000579727 ZFYVE19Q96K21 471 aa17.26■□□□□ 0.35
RARA-209ENST00000579727 SLITRK1Q96PX8 696 aa17.26■□□□□ 0.35
RARA-209ENST00000579727 LSM14BQ9BX40 385 aaKnown RBP17.26■□□□□ 0.35
RARA-209ENST00000579727 HSD3B7Q9H2F3 369 aa17.26■□□□□ 0.35
RARA-209ENST00000579727 ACP6Q9NPH0 428 aa17.26■□□□□ 0.35
RARA-209ENST00000579727 KIF26AQ9ULI4 1882 aaPredicted RBP17.26■□□□□ 0.35
RARA-209ENST00000579727 RIF1Q5UIP0 2472 aaKnown RBP17.26■□□□□ 0.35
RARA-209ENST00000579727 FAM186AA6NE01 2351 aa17.25■□□□□ 0.35
RARA-209ENST00000579727 TRAV19A0A0A6YYK7 116 aa17.25■□□□□ 0.35
RARA-209ENST00000579727 KRBA1A5PL33 1030 aa17.25■□□□□ 0.35
RARA-209ENST00000579727 ZNF840PA6NDX5 716 aa17.25■□□□□ 0.35
RARA-209ENST00000579727 O00370 1275 aa17.25■□□□□ 0.35
RARA-209ENST00000579727 CYP26A1O43174 497 aa17.25■□□□□ 0.35
RARA-209ENST00000579727 PAEPP09466 180 aa17.25■□□□□ 0.35
RARA-209ENST00000579727 PSMC3P17980 439 aa17.25■□□□□ 0.35
RARA-209ENST00000579727 KLK7P49862 253 aa17.25■□□□□ 0.35
RARA-209ENST00000579727 ZNF132P52740 706 aa17.25■□□□□ 0.35
RARA-209ENST00000579727 COPB1P53618 953 aaKnown RBP17.25■□□□□ 0.35
RARA-209ENST00000579727 PDE4CQ08493 712 aa17.25■□□□□ 0.35
RARA-209ENST00000579727 MFSD6LQ8IWD5 586 aa17.25■□□□□ 0.35
RARA-209ENST00000579727 DHX40Q8IX18 779 aaKnown RBP17.25■□□□□ 0.35
RARA-209ENST00000579727 YAF2Q8IY57 180 aa17.25■□□□□ 0.35
RARA-209ENST00000579727 ANKRD52Q8NB46 1076 aa17.25■□□□□ 0.35
RARA-209ENST00000579727 TTC8Q8TAM2 541 aa17.25■□□□□ 0.35
RARA-209ENST00000579727 TRMT61BQ9BVS5 477 aaKnown RBP17.25■□□□□ 0.35
RARA-209ENST00000579727 NAT10Q9H0A0 1025 aaKnown RBP17.25■□□□□ 0.35
RARA-209ENST00000579727 BRD9Q9H8M2 597 aa17.25■□□□□ 0.35
RARA-209ENST00000579727 SLC2A4RGQ9NR83 387 aa17.25■□□□□ 0.35
RARA-209ENST00000579727 TDP1Q9NUW8 608 aa17.25■□□□□ 0.35
RARA-209ENST00000579727 HESX1Q9UBX0 185 aa17.25■□□□□ 0.35
RARA-209ENST00000579727 DNAJC12Q9UKB3 198 aa17.25■□□□□ 0.35
RARA-209ENST00000579727 BECN2A8MW95 431 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms