RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 PYCARDQ9ULZ3 195 aa10.61□□□□□ -0.71
MSI2-209ENST00000579483 APOBEC2Q9Y235 224 aaKnown RBP10.61□□□□□ -0.71
MSI2-209ENST00000579483 DRG1Q9Y295 367 aaKnown RBP10.61□□□□□ -0.71
MSI2-209ENST00000579483 SALL3Q9BXA9 1300 aa10.61□□□□□ -0.71
MSI2-209ENST00000579483 TBC1D3BA6NDS4 549 aa10.61□□□□□ -0.71
MSI2-209ENST00000579483 RBAK-RBAKDNI3L0D1 243 aa10.61□□□□□ -0.71
MSI2-209ENST00000579483 RAMP2O60895 175 aa10.61□□□□□ -0.71
MSI2-209ENST00000579483 CSDE1O75534 798 aaKnown RBP10.61□□□□□ -0.71
MSI2-209ENST00000579483 APOA4P06727 396 aa10.61□□□□□ -0.71
MSI2-209ENST00000579483 CYP11B1P15538 503 aa10.61□□□□□ -0.71
MSI2-209ENST00000579483 NDST1P52848 882 aa10.61□□□□□ -0.71
MSI2-209ENST00000579483 CRHR2Q13324 411 aa10.61□□□□□ -0.71
MSI2-209ENST00000579483 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.61□□□□□ -0.71
MSI2-209ENST00000579483 DENND5BQ6ZUT9 1274 aa10.61□□□□□ -0.71
MSI2-209ENST00000579483 KDELC2Q7Z4H8 507 aa10.61□□□□□ -0.71
MSI2-209ENST00000579483 PALB2Q86YC2 1186 aa10.61□□□□□ -0.71
MSI2-209ENST00000579483 LRRC37BQ96QE4 947 aa10.61□□□□□ -0.71
MSI2-209ENST00000579483 C11orf84Q9BUA3 381 aaPredicted RBP10.61□□□□□ -0.71
MSI2-209ENST00000579483 Q9Y3F1 56 aa10.61□□□□□ -0.71
MSI2-209ENST00000579483 LRRIQ3A6PVS8 624 aaPredicted RBP10.6□□□□□ -0.71
MSI2-209ENST00000579483 SLCO1A2P46721 670 aa10.6□□□□□ -0.71
MSI2-209ENST00000579483 ATP1A2P50993 1020 aa10.6□□□□□ -0.71
MSI2-209ENST00000579483 C1QBPQ07021 282 aaKnown RBP10.6□□□□□ -0.71
MSI2-209ENST00000579483 TUSC3Q13454 348 aa10.6□□□□□ -0.71
MSI2-209ENST00000579483 CENPPQ6IPU0 288 aa10.6□□□□□ -0.71
MSI2-209ENST00000579483 LENG9Q96B70 501 aa10.6□□□□□ -0.71
MSI2-209ENST00000579483 RSRC1Q96IZ7 334 aaKnown RBP10.6□□□□□ -0.71
MSI2-209ENST00000579483 VCPIP1Q96JH7 1222 aa10.6□□□□□ -0.71
MSI2-209ENST00000579483 PHF2O75151 1096 aa10.6□□□□□ -0.71
MSI2-209ENST00000579483 ARHGDIAP52565 204 aa10.6□□□□□ -0.71
MSI2-209ENST00000579483 FPGSQ05932 587 aa10.6□□□□□ -0.71
MSI2-209ENST00000579483 MCL1Q07820 350 aa10.6□□□□□ -0.71
MSI2-209ENST00000579483 FNDC3BQ53EP0 1204 aaKnown RBP10.6□□□□□ -0.71
MSI2-209ENST00000579483 TAS1R2Q8TE23 839 aa10.6□□□□□ -0.71
MSI2-209ENST00000579483 FAM172AQ8WUF8 416 aa10.6□□□□□ -0.71
MSI2-209ENST00000579483 MTBPQ96DY7 904 aa10.6□□□□□ -0.71
MSI2-209ENST00000579483 C2orf49Q9BVC5 232 aaPredicted RBP10.6□□□□□ -0.71
MSI2-209ENST00000579483 TRIM55Q9BYV6 548 aa10.6□□□□□ -0.71
MSI2-209ENST00000579483 COG4Q9H9E3 785 aa10.6□□□□□ -0.71
MSI2-209ENST00000579483 KCNMB3Q9NPA1 279 aa10.6□□□□□ -0.71
MSI2-209ENST00000579483 FAM105AQ9NUU6 356 aa10.6□□□□□ -0.71
MSI2-209ENST00000579483 SELENONQ9NZV5 590 aa10.6□□□□□ -0.71
MSI2-209ENST00000579483 ZC3H7BQ9UGR2 993 aaKnown RBP10.6□□□□□ -0.71
MSI2-209ENST00000579483 SLC39A10Q9ULF5 831 aa10.6□□□□□ -0.71
MSI2-209ENST00000579483 TIMM13Q9Y5L4 95 aaPredicted RBP10.6□□□□□ -0.71
MSI2-209ENST00000579483 PDE2AO00408 941 aaPredicted RBP10.6□□□□□ -0.71
MSI2-209ENST00000579483 LYPLA2O95372 231 aa10.6□□□□□ -0.71
MSI2-209ENST00000579483 KCNA2P16389 499 aa10.6□□□□□ -0.71
MSI2-209ENST00000579483 NCF2P19878 526 aaPredicted RBP10.6□□□□□ -0.71
MSI2-209ENST00000579483 GRK3P35626 688 aa10.6□□□□□ -0.71
MSI2-209ENST00000579483 PMS2P54278 862 aa10.6□□□□□ -0.71
MSI2-209ENST00000579483 PRKCZQ05513 592 aa10.6□□□□□ -0.71
MSI2-209ENST00000579483 MAPRE2Q15555 327 aa10.6□□□□□ -0.71
MSI2-209ENST00000579483 SLC25A41Q8N5S1 370 aa10.6□□□□□ -0.71
MSI2-209ENST00000579483 SPPL2BQ8TCT7 592 aa10.6□□□□□ -0.71
MSI2-209ENST00000579483 SLC26A7Q8TE54 656 aa10.6□□□□□ -0.71
MSI2-209ENST00000579483 FAM47DPA6NHR8 397 aa10.6□□□□□ -0.71
MSI2-209ENST00000579483 C1QTNF3-AMACRE9PGA6 284 aa10.6□□□□□ -0.71
MSI2-209ENST00000579483 CBX4O00257 560 aa10.6□□□□□ -0.71
MSI2-209ENST00000579483 SERPIND1P05546 499 aa10.6□□□□□ -0.71
MSI2-209ENST00000579483 PON1P27169 355 aa10.6□□□□□ -0.71
MSI2-209ENST00000579483 GRM5P41594 1212 aa10.6□□□□□ -0.71
MSI2-209ENST00000579483 TGM3Q08188 693 aa10.6□□□□□ -0.71
MSI2-209ENST00000579483 RCN2Q14257 317 aa10.6□□□□□ -0.71
MSI2-209ENST00000579483 NR1I3Q14994 352 aa10.6□□□□□ -0.71
MSI2-209ENST00000579483 MORF4L2Q15014 288 aa10.6□□□□□ -0.71
MSI2-209ENST00000579483 ANKRD20A4Q4UJ75 823 aa10.6□□□□□ -0.71
MSI2-209ENST00000579483 ANKRD20A8PQ5CZ79 823 aa10.6□□□□□ -0.71
MSI2-209ENST00000579483 ANKRD20A2Q5SQ80 823 aa10.6□□□□□ -0.71
MSI2-209ENST00000579483 ANKRD20A1Q5TYW2 823 aa10.6□□□□□ -0.71
MSI2-209ENST00000579483 TTC17Q96AE7 1141 aa10.6□□□□□ -0.71
MSI2-209ENST00000579483 TTPALQ9BTX7 342 aa10.6□□□□□ -0.71
MSI2-209ENST00000579483 ASPSCR1Q9BZE9 553 aa10.6□□□□□ -0.71
MSI2-209ENST00000579483 TBC1D13Q9NVG8 400 aa10.6□□□□□ -0.71
MSI2-209ENST00000579483 DNMT3LQ9UJW3 386 aa10.6□□□□□ -0.71
MSI2-209ENST00000579483 TSPAN16Q9UKR8 245 aa10.6□□□□□ -0.71
MSI2-209ENST00000579483 PTCH2Q9Y6C5 1203 aa10.6□□□□□ -0.71
MSI2-209ENST00000579483 PPP1R3GB7ZBB8 358 aa10.59□□□□□ -0.71
MSI2-209ENST00000579483 IFRD1O00458 451 aaPredicted RBP10.59□□□□□ -0.71
MSI2-209ENST00000579483 MEIS2O14770 477 aa10.59□□□□□ -0.71
MSI2-209ENST00000579483 LGR5O75473 907 aa10.59□□□□□ -0.71
MSI2-209ENST00000579483 SERPINF2P08697 491 aa10.59□□□□□ -0.71
MSI2-209ENST00000579483 ICAM3P32942 547 aa10.59□□□□□ -0.71
MSI2-209ENST00000579483 PCK1P35558 622 aa10.59□□□□□ -0.71
MSI2-209ENST00000579483 ABCE1P61221 599 aaKnown RBP10.59□□□□□ -0.71
MSI2-209ENST00000579483 FIGNQ5HY92 759 aa10.59□□□□□ -0.71
MSI2-209ENST00000579483 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.59□□□□□ -0.71
MSI2-209ENST00000579483 AP4E1Q9UPM8 1137 aa10.59□□□□□ -0.71
MSI2-209ENST00000579483 L3MBTL1Q9Y468 752 aa10.59□□□□□ -0.71
MSI2-209ENST00000579483 PCDHAC2Q9Y5I4 1007 aa10.59□□□□□ -0.71
MSI2-209ENST00000579483 F5H423 210 aaPredicted RBP10.59□□□□□ -0.71
MSI2-209ENST00000579483 PFKMP08237 780 aa10.59□□□□□ -0.71
MSI2-209ENST00000579483 CHRM3P20309 590 aa10.59□□□□□ -0.71
MSI2-209ENST00000579483 SH3D19Q5HYK7 790 aa10.59□□□□□ -0.71
MSI2-209ENST00000579483 LRRC52Q8N7C0 313 aa10.59□□□□□ -0.71
MSI2-209ENST00000579483 PGLYRP2Q96PD5 576 aa10.59□□□□□ -0.71
MSI2-209ENST00000579483 ATP13A1Q9HD20 1204 aa10.59□□□□□ -0.71
MSI2-209ENST00000579483 CREBZFQ9NS37 354 aa10.59□□□□□ -0.71
MSI2-209ENST00000579483 ZMYM5Q9UJ78 669 aa10.59□□□□□ -0.71
MSI2-209ENST00000579483 PCDHA2Q9Y5H9 948 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms